TCONS_00025581 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025581
Unique NameTCONS_00025581
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025581 ID=TCONS_00025581|Name=TCONS_00025581|organism=Clytia hemisphaerica|type=transcript|length=136bp
CATAGTGGTCCAGTTTTGAAATTAGAATAGAATGACCAACAGTGTCAAAA
GCCTTttgcaaatcaacaaaaacaccaCACACAAAGTTACCATCATCAAG
AGATTTCCGAATACGTTCAACAATATTAAGTAAGGT
Run BLAST on NCBI

transcript from alignment at sc0000539:36442..36577

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025581 ID=TCONS_00025581|Name=TCONS_00025581|organism=Clytia hemisphaerica|type=transcript|length=136bp|location=Sequence derived from alignment at sc0000539:36442..36577 (Clytia hemisphaerica)
ACCTTACTTAATATTGTTGAACGTATTCGGAAATCTCTTGATGATGGTAA
CTTTGTGTGtggtgtttttgttgatttgcaaAAGGCTTTTGACACTGTTG
GTCATTCTATTCTAATTTCAAAACTGGACCACTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014354XLOC_014354Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025581-exon-sc0000539-1491911889:36442..36577TCONS_00025581-exon-sc0000539-1491911889:36442..36577Clytia hemisphaericaexon
TCONS_00025581-exon-sc0000539-1510915933:36442..36577TCONS_00025581-exon-sc0000539-1510915933:36442..36577Clytia hemisphaericaexon
TCONS_00025581-exon-sc0000539-1575043694:36442..36577TCONS_00025581-exon-sc0000539-1575043694:36442..36577Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000539supercontigsc0000539:36442..36577 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025581 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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