TCONS_00025459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025459
Unique NameTCONS_00025459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5034

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025459 ID=TCONS_00025459|Name=TCONS_00025459|organism=Clytia hemisphaerica|type=transcript|length=5034bp
NCACTGTTCTTGAAAACACCCCAGACCATCTTCCAGATATAAGCATTTTC
CCAGTTCATGACATCATAGCTGGGCCATTAAAGGTCATTCCCATTCGAGG
AAAAAAAAGGAACATTCCAGATTATGATTTAATTGAACATATGTTTAACA
AAGTAGCAGGACTAAACCGTCTAGCTTTAGTAAATATGATGTAATATCCA
tacttttttaagcttttgagtTATATATGCTAAACATTATTGTTGTATTT
TGgcatagtttttcttgaaaatgtttcacaaaattgtattccaGAAGAAT
GTTTGagaaatagataaatatttttgtgttcaacatcaaaaaattctaaa
acttgcaatttttctcatatgtacctcaaaacccacaattaaaaaagtga
gttttttgaGAGCAATTAAAATAAACACATTGCTTACAGCACTTAGGACT
TTTTTCCTATATTTGTGTTATGCCTAGAAGTAATAGAAAATGAAAGATTG
ATAGGTTAGTCAATAGCAAGTGACTtatctgaccattttttgaaaaaaat
cacaaattttgaaGTTAGATTTCTAGCATTAAAtcttgataaaaaacttt
tacccaatcaataatgctcaatttttttttaaataataaagaaacTATTA
TGCCAACATAATCTTAAAAAGTTATgctgataaaaacattttagattttt
ccaGAACtcctgaaatgaaattgttggtTTTGAGGTACCTGTGGGTTTTG
TGGTACATATACCTGTAAACCAATGCATTTTTGCCTGCAAGGGGTTATAG
GGAAAGTAGGTTTTGAGCTCCTAACGTCTGATAGCGAtcttttttggcaa
aaagtttcaaggtggTATATATGATATTATGAATAGAAAGAACATATtaa
tgactaaaatttgaggggatttccAATGAACAGAActtttaagaaaagct
caaaaaccaaCTTTTCCTTATAGGAAACTCCTCAGGTAAAAACGTGTTTG
TTTACATCCAGAGGCAGAGACCAAATGGAAATGGCGgaaagcatcaaaat
aatgtgtGCGCATATCTGTTTTATGAATCAATGGGAAGGTGTATTTCAGC
CAAAATCTTACTGCATGTAATAAATACCTGGTATTTTTGTTGAACCTTTT
AGCATTGCTGGTAATAATTGGCAATTAAACggtaaaaatgctctaaaaat
gacttATGGCAAAATCTTCATGATGCATcgagaacttttttaaaactttt
taatatataccgtgagattgggtaacttgcatcagtggaggctaacatgc
atagccctcaaatgaatgacatggctggtcattaaaatacaactatgcag
ctccgcttgcagctctactctaccatttttgttttgatttaactttgtat
tttaatgaccagccaggtcatttatttcAGGGCTATGCATgatagcctcc
actgatgcaagttacccaatctcacggtatttcATACACTCCGGTTCAAA
CCTACATGTTTCCAATTACGAAACATGCATACCACTGTGGTCACAAGGGC
TGCTGGTTTTCTGAAATTGAAGGTTCTATGGTTCTATACAGAGTGACGTT
ATTTATAGTAGATACAGGTGACCTAACTGTTATGATCGCCACACACAGGT
GCACCACCGGGATGCACTGCCATCTGGGTGTACAGTATGGTTTTTTGGCT
TCTTGGTAGCTTTTTATTCAAAACAGAAGTCTCATTGTTATTTTGTGACT
TAACGTCAcaaagaagatgctcaattgtcattgaacttGTTGTGTgatgt
caatttttgaaatatgtagcctccgtggaagctatatattcgaaaatatt
ggacagtaaataagccaatcaaatgtcgctatttacgcaCGTTGGATAAT
AATacattatatttccttaattcagaaacacaaaaattcactttgcattc
gcgaaaaataaaaaataacaaaatgatgaattaatattacatactaaaac
GCCCCCGTCTTTCAGTCTCGTCTTGCAAAACGCCCGTCTGCCCAATAGAC
CCCTTTCATGTGATGTCATATGTTTTGGATTACCTTGTTTAGCCtaatta
aaatatattacaaatttGGATGATAGAGGCAATATGCCTCCAACTTTGCC
TCCGAATTTTGTCTCTTTTATTccagattttgttaaaaaagaccataCAG
AAAAGAAGACTAagcgagaaaatcaaaacaagctgaaaaattatgaaagg
gGTCTATATTCACCCAATTATCTTAAATTCACCTtgattgtcctttgact
ttcaaaaaattatatttaaaaattatgaatttataataaatacaataaac
aaaatgtttgatacttcatcagtgaaatattcaacaaattcctagtttca
attttcagtagGCATTTTTCTAGCGCTTAGTTTATCGCGCGTTTTTTCAC
GTCACACAAATTTTCTCAGCCGTTTgaaataattatgcattgccaaattt
ggttctccattgttcttactgtcaagtcaggatcgatggtgacacctaag
aataaaaaagaaaggaattcgtcagttttatgcatatattaatttgtgAG
ATTTTCTATTCGTTGTACATTTTCGTAGACTTTTCAGAATACCTCTTTTT
GCTTGCGGGATCAatggtaacttttcattttcattattttttaaatggag
cagaaccgaaaaaaaattaaacttccgAAAGTTGCACATTTCAAGtaagt
aaacgattctgacaattgacaaaattaatgatgataattttttatcgGTC
AgccaaatgtctcgtattgggggttctagctTTGAGCTTTAAAAGCCTAC
GCAAGATTGCAGCGTTTGGGTAATCAAGGCAAAACtaaaaaaagctggtg
ttttgaagtgTTTCCGTGCGATCACAATATCGCACTTTGTGACGCACTGC
TTATCATATTACATTTCTTTCATTACTTTGACGGTTTATTAAAATTATGC
TTACATTTTTGAgtgattttgaaatgaaaacagAAGAGCTAGAATGGAAC
TAATGATTCTTAAGCTTAGATACAATCGAATTTCTGATTGAAGAAATAGA
ACTTCATGTTTGTGTCCACTGGAATTCTTTTGTTGATGGACAAATTCTTC
TTCATCGAACACCCAGCttaaaactaaattttgaagtatcgacaaaaata
tttttgttacaaTAATTCTTAGGAATAGTAATAATAACTCAAACAGAGTC
AAATCTTTTtccaaatgaaaatgcctcatTCTGTCTGAAGTGCTGCAATG
AGTGGAGAAGTTGAACATTTACCGTAAGTATTTTTCTAAATGGAAATAAT
GAAACTTTAAATAAAGGTTATCGTCTTTTGGGGGTGACTTTCATGAGTTT
GAGATGTAACTCGCTATTCTTAGCTCCAAATCTCAAACCATCCAAAGCAG
TATATAAtatcaacaaaagaaatgtGTTCAAAAACTTTCATGAAATATTA
AATTTTAATCTTCTTGGTGTAGCAACTGTAGCGCAAAGCTGGACATTAGG
TAAGTTGAGGAATGTAGCAAGAAAGAGTGGTTCCCTTCCCTATTCCCCCT
ACCTTCAAATAGTTAGCCAATCAAGCAACAAACAGAAGTGGAGTCTGCCT
CTGACTGTGTTCACAGACTTAGACGGtaattaagtaagtaagtactTACA
CCCCTTGGGCCTGCTCGGACAACAAAGTGAGTCGATTTAAACTCACTGTT
CAATAGAAATTCCCCAAAAGCAATAACCCAAATTTTCTAGTAAAGGATAA
GGACAATATGTGGCAAAAATTAAGAGCAGCAGAGTCTCAACAGAAATTTT
CTGATTCTTACAAAGCAAGAGTGTATACTAAATAGTTTTAGCAATTTATC
TTAGTGTTGACTtttattttctgtatttttatGATACTGTAGATGGTTCC
ACCCGAATTTAAACAGACATCAAACTGAAGCTCTATTGTTACATAATGGA
CAAGATGGCTCCTATCTTATACGCTCCAGTACAAGTCATGAAGGCGAATA
CTCACTGTCTGTCAAATGTGCAAATTCtgtcaaacattttcaaatagGAT
GGAATGGGAATGAATATGTTTTTGGGATGGGAAAGTTCTCGAACATTGAA
GATTTTGTCTCTCATTTTGAGAACAAACCTTTGATTGGAGGAGAAACTGg
tgttttgattttgttacgATACCCTTATCCACGGCATGTTGAGGAGCCAA
CTAAGTATGATACAATACGTGTTCATGCTGAATGGGGAAATCGACCCTCA
AGCCAGCATGCTGATGATGCACATATTGAATCACTCAATTCCAAAGAAGG
ATATCTTACTAAGCAGGGTGGAAGAAGAAAGaactGGAAAGCGCGCTGGT
TCGTTTTGGAGAGGAATCTATTCAGATATTACAAGACAAAAGGGgaaGCT
CAACCCATAAGAACATTAGACTTGGATAAATGTTTGGAGATTGACCAAGA
CTTTGAATGTGGCAAAGATAACACTATAAAggtTGTCATGCCTGGTCGCA
CTTTTTTAATTTATGCAAGTACACCTACTGAGAAGGATGATTGGCTCAAA
ATATTGAAGTGGAAAATAGAAAAGCTTCACAATGCTATTTGAATGGTAAT
TGCTTTATAATTCTCAAATCATCCAGTTTGGCATCATACTGTGTGTGCCA
AGAAAGTGGACAAAATTTTAcgtaaagtaaaatcctcaaaactcattatc
taaactgggcttaaaaaattgaaataagattaaaattCTGTTCAATATCA
ATAGATATTCGATTCCaaagatgattgaataggttttggAGATTGAAAGA
TTAAGTATACAAGTTTAGCATAAACCATGAGGCTTTTACCTTATGTAAAT
ATTCATCCGCTTTTTTCGAGACACACTGTATTAAAGGTTCTctagtactc
tcgggtacctaatagccgtcccccccccgctaattaatttttcgaaaatt
ttccacccaggacattcttattccaacccccccg
Run BLAST on NCBI

transcript from alignment at sc0000536:103395..111959+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025459 ID=TCONS_00025459|Name=TCONS_00025459|organism=Clytia hemisphaerica|type=transcript|length=8565bp|location=Sequence derived from alignment at sc0000536:103395..111959+ (Clytia hemisphaerica)
NCACTGTTCTTGAAAACACCCCAGACCATCTTCCAGATATAAGCATTTTC
CCAGTTCATGACATCATAGCTGGGCCATTAAAGGTCATTCCCATTCGAGG
AAAAAAAAGGAACATTCCAGATTATGATTTAATTGAACATATGTTTAACA
AAGTAGCAGGACTAAACCGTCTAGCTTTAGTAAATATGATGTAATATCCA
tacttttttaagcttttgagtTATATATGCTAAACATTATTGTTGTATTT
TGgcatagtttttcttgaaaatgtttcacaaaattgtattccaGAAGAAT
GTTTGagaaatagataaatatttttgtgttcaacatcaaaaaattctaaa
acttgcaatttttctcatatgtacctcaaaacccacaattaaaaaagtga
gttttttgaGAGCAATTAAAATAAACACATTGCTTACAGCACTTAGGACT
TTTTTCCTATATTTGTGTTATGCCTAGAAGTAATAGAAAATGAAAGATTG
ATAGGTTAGTCAATAGCAAGTGACTtatctgaccattttttgaaaaaaat
cacaaattttgaaGTTAGATTTCTAGCATTAAAtcttgataaaaaacttt
tacccaatcaataatgctcaatttttttttaaataataaagaaacTATTA
TGCCAACATAATCTTAAAAAGTTATgctgataaaaacattttagattttt
ccaGAACtcctgaaatgaaattgttggtTTTGAGGTACCTGTGGGTTTTG
TGGTACATATACCTGTAAACCAATGCATTTTTGCCTGCAAGGGGTTATAG
GGAAAGTAGGTTTTGAGCTCCTAACGTCTGATAGCGAtcttttttggcaa
aaagtttcaaggtggTATATATGATATTATGAATAGAAAGAACATATtaa
tgactaaaatttgaggggatttccAATGAACAGAActtttaagaaaagct
caaaaaccaaCTTTTCCTTATAGGAAACTCCTCAGGTAAAAACGTGTTTG
TTTACATCCAGAGGCAGAGACCAAATGGAAATGGCGgaaagcatcaaaat
aatgtgtGCGCATATCTGTTTTATGAATCAATGGGAAGGTGTATTTCAGC
CAAAATCTTACTGCATGTAATAAATACCTGGTATTTTTGTTGAACCTTTT
AGCATTGCTGGTAATAATTGGCAATTAAACggtaaaaatgctctaaaaat
gacttATGGCAAAATCTTCATGATGCATcgagaacttttttaaaactttt
taatatataccgtgagattgggtaacttgcatcagtggaggctaacatgc
atagccctcaaatgaatgacatggctggtcattaaaatacaactatgcag
ctccgcttgcagctctactctaccatttttgttttgatttaactttgtat
tttaatgaccagccaggtcatttatttcAGGGCTATGCATgatagcctcc
actgatgcaagttacccaatctcacggtatttcATACACTCCGGTTCAAA
CCTACATGTTTCCAATTACGAAACATGCATACCACTGTGGTCACAAGGGC
TGCTGGTTTTCTGAAATTGAAGGTTCTATGGTTCTATACAGAGTGACGTT
ATTTATAGTAGATACAGGTGACCTAACTGTTATGATCGCCACACACAGGT
GCACCACCGGGATGCACTGCCATCTGGGTGTACAGTATGGTTTTTTGGCT
TCTTGGTAGCTTTTTATTCAAAACAGAAGTCTCATTGTTATTTTGTGACT
TAACGTCAcaaagaagatgctcaattgtcattgaacttGTTGTGTgatgt
caatttttgaaatatgtagcctccgtggaagctatatattcgaaaatatt
ggacagtaaataagccaatcaaatgtcgctatttacgcaCGTTGGATAAT
AATacattatatttccttaattcagaaacacaaaaattcactttgcattc
gcgaaaaataaaaaataacaaaatgatgaattaatattacatactaaaac
GCCCCCGTCTTTCAGTCTCGTCTTGCAAAACGCCCGTCTGCCCAATAGAC
CCCTTTCATGTGATGTCATATGTTTTGGATTACCTTGTTTAGCCtaatta
aaatatattacaaatttGGATGATAGAGGCAATATGCCTCCAACTTTGCC
TCCGAATTTTGTCTCTTTTATTccagattttgttaaaaaagaccataCAG
AAAAGAAGACTAagcgagaaaatcaaaacaagctgaaaaattatgaaagg
gGTCTATATTCACCCAATTATCTTAAATTCACCTtgattgtcctttgact
ttcaaaaaattatatttaaaaattatgaatttataataaatacaataaac
aaaatgtttgatacttcatcagtgaaatattcaacaaattcctagtttca
attttcagtagGCATTTTTCTAGCGCTTAGTTTATCGCGCGTTTTTTCAC
GTCACACAAATTTTCTCAGCCGTTTgaaataattatgcattgccaaattt
ggttctccattgttcttactgtcaagtcaggatcgatggtgacacctaag
aataaaaaagaaaggaattcgtcagttttatgcatatattaatttgtgAG
ATTTTCTATTCGTTGTACATTTTCGTAGACTTTTCAGAATACCTCTTTTT
GCTTGCGGGATCAatggtaacttttcattttcattattttttaaatggag
cagaaccgaaaaaaaattaaacttccgAAAGTTGCACATTTCAAGtaagt
aaacgattctgacaattgacaaaattaatgatgataattttttatcgGTC
AgccaaatgtctcgtattgggggttctagctTTGAGCTTTAAAAGCCTAC
GCAAGATTGCAGCGTTTGGGTAATCAAGGCAAAACtaaaaaaagctggtg
ttttgaagtgTTTCCGTGCGATCACAATATCGCACTTTGTGACGCACTGC
TTATCATATTACATTTCTTTCATTACTTTGACGGTTTATTAAAATTATGC
TTACATTTTTGAgtgattttgaaatgaaaacagAAGAGCTAGAATGGAAC
TAATGATTCTTAAGCTTAGATACAATCGAATTTCTGATTGAAGAAATAGA
ACTTCATGTTTGTGTCCACTGGAATTCTTTTGTTGATGGACAAATTCTTC
TTCATCGAACACCCAGCttaaaactaaattttgaagtatcgacaaaaata
tttttgttacaaTAATTCTTAGGAATAGTAATAATAACTCAAACAGAGTC
AAATCTTTTtccaaatgaaaatgcctcatTCTGTCTGAAGTGCTGCAATG
AGTGGAGAAGTTGAACATTTACCGTAAGTATTTTTCTAAATGGAAATAAT
GAAACTTTAAATAAAGGTTATCGTCTTTTGGGGGTGACTTTCATGAGTTT
GAGATGTAACTCGCTATTCTTAGCTCCAAATCTCAAACCATCCAAAGCAG
TATATAAtatcaacaaaagaaatgtGTTCAAAAACTTTCATGAAATATTA
AATTTTAATCTTCTTGGTGTAGCAACTGTAGCGCAAAGCTGGACATTAGG
TAAGTTGAGGAATGTAGCAAGAAAGAGTGGTTCCCTTCCCTATTCCCCCT
ACCTTCAAATAGTTAGCCAATCAAGCAACAAACAGAAGTGGAGTCTGCCT
CTGACTGTGTTCACAGACTTAGACGGtaattaagtaagtaagtactTACA
CCCCTTGGGCCTGCTCGGACAACAAAGTGAGTCGATTTAAACTCACTGTT
CAATAGAAATTCCCCAAAAGCAATAACCCAAATTTTCTAGTAAAGGATAA
GGACAATATGTGGCAAAAATTAAGAGCAGCAGAGTCTCAACAGAAATTTT
CTGATTCTTACAAAGCAAGAGTGTATACTAAATAGTTTTAGCAATTTATC
TTAGTGTTGACTtttattttctgtatttttatGATACTGTAGATGGTTCC
ACCCGAATTTAAACAGACATCAAACTGAAGCTCTATTGTTACATAATGGA
CAAGATGGCTCCTATCTTATACGCTCCAGTACAAGTCATGAAGGCGAATA
CTCACTGTCTGTCAAATGTGCAAATTCtgtcaaacattttcaaatagGAT
GGAATGGGAATGAATATGTTTTTGGGATGGGAAAGTTCTCGAACATTGAA
GATTTTGTCTCTCATTTTGAGAACAAACCTTTGATTGGAGGAGAAACTGG
TATATAAAATTAACTTACTGATTAAAAAACTTggattttgatcaattttt
ttttttaagatgctTAATTTTGCACGGCCGGCCAGCAAAAGGAGTGGGAG
TGGGGATGCCTATAATAACTTGTCAACCACTCTTTATAAGCTTCTTTATA
TATTGAGAAGAAGGATAAATGTACAAAGTTCTCTATACCACAAAACAAAT
AGAGCTGATTAAAatcgggttggtctaaaaagcagggtagccaatggggt
agccaattgggctaggttatggggtacctcttttttgcctaaacttttga
aatctgaaacctattttcatgtggaaataactatacaacatcttgttaat
gattccatgtaataaaatttaagattcctttcNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATTAAAATCATTCATTTATTTGTCAA
CAAGTACACAAAATTCATTGTTTCACCCGAAggattttcaaatgaaaaat
gattgtTTGAGACtttgagaacattttattacaataaaaataatgttaag
aaagttaaaaactatACATAACTTCATGTTTTACAACATTACATTTTTTC
aggtgttttgattttgttacgATACCCTTATCCACGGCATGTTGAGGAGC
CAACTAAGTATGATACAATACGTGTTCATGCTGAATGGGGAAATCGACCC
TCAAGCCAGCATGCTGATGATGCACATATTGAATCAGTATGAGTTACAAT
ACATTTCCTTaacatttttcattgaaaactcATTTAAAGCACACAGGGCT
CTTcatctaaataaaaaattctgaTAGATTTAAGCatacccaaaaaaatt
ttcccttgCTGGTCCACTGGGTTAGCTCTTATCTGGTCAGCTGGGAATGG
TTTGCTGAATTTCAATCCCTAAATTCAGATTTTTGAAGCATCATGGATGT
TATAAAGGGTGTCAGATTATGAACACGCTTTGACATAAAAAAGTTCAGTC
AAGGAAACATTATGTGTCTGACTGTTTACTTCTTACAGTATTGGAATTGA
TTATTGTATTTCTGTTGTAGCTCAATTCCAAAGAAGGATATCTTACTAAG
CAGGGTGGAAGAAGAAAGGTATCCATGTTATTTATAGTAAccttatttta
atatttttaagtGATGTTTAAAGGCATAGATAGGCATATTATATAAAAAG
TAAGACCCAAAAACTTATCTcactttgatttgaaaatttcagaactGGAA
AGCGCGCTGGTTCGTTTTGGAGAGGAATCTATTCAGATATTACAAGACAA
AAGGGGTTTGTGTTTATCGCAATTCAACAAAAACAACTTGAAATATTCTC
ACATCCACCCTTTTACAATGTTTCCAGTATTTTTCTTATATCTCTGGAGC
CTTTGATTCTACCCTAGAGGACCTAAAAATCACTGCAATGGTTGGTCTCA
GACATACTCATAAGATATCGACACATGAGATAATTAAAATAAgtcataaa
aatataaaaaagcgGTGCAGGTTTAATCAAGAAATCATTTCTCTCATGTC
AAATACTTCATTATAGTTTTCTTGATAACCTTTATTAAAAACTATCTTTt
tggaattgaatatcttttgatTGGAAAAAGAAGTTTCTTGTCTTTTGTCG
GAATTCCCAAGTCTAGTACAATTGGATAATGACTTTTATTGATATTTATA
TAAGTAAACTCTGTTCCAAACCTTTTCCGAATACCCTGTGCGTTACTTTA
tatttccttttcatttttttcaggaaGCTCAACCCATAAGAACATTAGAC
TTGGATAAATGTTTGGAGATTGACCAAGACTTTGAATGTGGCAAAGATAA
CACTATAAAGTAATGTATCCATTGCGTTGAAAAGCTGAACTCAGTGttgc
aacttttttttcaaagactcATGGGGGACACAAAACTTTTTAAGTTAAAG
CCAGTATATCTATTCATGAGTATGTTTGCTTATTCTGCAAAAACATTCCA
CAGCTCCATTAATAACGCAgacaattcattccaattcttaTTCGACACTT
TGCAGTCAAAACATTGTAAACTCTCAGGccattaaaatgttatattagag
tgaagacattgcagtgttgATCGAACAAATACGTCACGCgctatcttttg
ttttgatgattggttgaataaCTGCAATCTTTATGTAAGCTCAGCGTTTT
TGAAGCAGCGATTCAGACTTAATGACGGAAAAcataatgtcaatctggct
ttaaggaaatttcgaggaAGGTTTATAAGGATTTTTCACCTAAAGGGAAT
AGAAAAATTGTTCGAATTAAAGATACAAATTAAAGatagaagttcgagtt
atggagactccactgtattagaaaaatactttttacaaaacttgattgag
atattattttttttcagggtTGTCATGCCTGGTCGCACTTTTTTAATTTA
TGCAAGTACACCTACTGAGAAGGATGATTGGCTCAAAATATTGAAGTGGA
AAATAgtaagttttctttttctttagttctttGACTCGCTGTTTTAGTAT
ACTTTACCTCAAAAATATTTCTGTTTTGGTTTTCCTCAAGTCATTCTCGC
GTCATAGTCCTGATGTTACCTCATCTCAAAATCTGGTAGGATCCTGCCAA
CTTGTAGAATTTGTCAAAACCAAAAATACACAAAGtataaattggaaaaa
taaaagcTGAATCCGACTGGATTTTTATTTGTTATCAGTAAAATTTATAA
TTACCACTCATAAAAAGCAAGAGTatctcatattttttataagattatAA
TTTTTGTAAGCGTTATTTCGACGCTCGtgtgtctttttcaagtttcATAT
CCTTTATATGTATATAGCTCCTTCCACTAGCAAAAAATGTATTGCCAGTT
AAGCGAGACAGGGttgtatactttaatgggataaactttcgcggggatta
aatttcgccgatttcgcggatttgggtgtcattcgcgaaaatctgcgaaa
ttaagctccaatggaaatttggaagggcctgatccgcgaaatatttctaa
acaaaactcaaaatatgtcaaataaatactatttgaatggttacttgcat
caaagaggcgcaaataatgtgtATTTCAaaaaccaacatgcatgatttga
cagtaaaagtcacaaaatcgtgaaaatattgccacccaatagtgctaccc
gcgaaattaagtccccgcgaatttttttgatttcgcGGTTGGGACTATTA
ATTTAATCCCTACGAAAGTTCATCCCATTTAAGTGATGTATGGGTTCATT
TTTGCGATTTTCTGTTATTAGTTCTGGCAAAAAATTTAGAATCCAAATTT
CGGTCTATATCCCTAGGAGATAAAACAATATATGAAAAAGATTTGCCAAA
TTTAGTAATCGTGAAATTTTATAAATTCTCAATTCGCAAAAAAAGTCATT
ctctttttgatatttcattCATTGACATTCCATCGTTTTTTCCTTTTAGG
AAAAGCTTCACAATGCTATTTGAATGGTAATTGCTTTATAATTCTCAAAT
CATCCAGTTTGGCATCATACTGTGTGTGCCAAGAAAGTGGACAAAATTTT
Acgtaaagtaaaatcctcaaaactcattatctaaactgggcttaaaaaat
tgaaataagattaaaattCTGTTCAATATCAATAGATATTCGATTCCaaa
gatgattgaataggttttggAGATTGAAAGATTAAGTATACAAGTTTAGC
ATAAACCATGAGGCTTTTACCTTATGTAAATATTCATCCGCTTTTTTCGA
GACACACTGTATTAAAGGTTCTctagtactctcgggtacctaatagccgt
cccccccccgctaattaatttttcgaaaattttccacccaggacattctt
attccaacccccccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014294XLOC_014294Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025459-exon-sc0000536-1491911889:103395..107593TCONS_00025459-exon-sc0000536-1491911889:103395..107593Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:103395..107593TCONS_00025459-exon-sc0000536-1510915933:103395..107593Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:103395..107593TCONS_00025459-exon-sc0000536-1575043694:103395..107593Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1491911889:108647..108780TCONS_00025459-exon-sc0000536-1491911889:108647..108780Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:108647..108780TCONS_00025459-exon-sc0000536-1510915933:108647..108780Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:108647..108780TCONS_00025459-exon-sc0000536-1575043694:108647..108780Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1491911889:109115..109162TCONS_00025459-exon-sc0000536-1491911889:109115..109162Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:109115..109162TCONS_00025459-exon-sc0000536-1510915933:109115..109162Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:109115..109162TCONS_00025459-exon-sc0000536-1575043694:109115..109162Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1491911889:109287..109349TCONS_00025459-exon-sc0000536-1491911889:109287..109349Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:109287..109349TCONS_00025459-exon-sc0000536-1510915933:109287..109349Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:109287..109349TCONS_00025459-exon-sc0000536-1575043694:109287..109349Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1491911889:109818..109903TCONS_00025459-exon-sc0000536-1491911889:109818..109903Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:109818..109903TCONS_00025459-exon-sc0000536-1510915933:109818..109903Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:109818..109903TCONS_00025459-exon-sc0000536-1575043694:109818..109903Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1491911889:110462..110549TCONS_00025459-exon-sc0000536-1491911889:110462..110549Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:110462..110549TCONS_00025459-exon-sc0000536-1510915933:110462..110549Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:110462..110549TCONS_00025459-exon-sc0000536-1575043694:110462..110549Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1491911889:111544..111959TCONS_00025459-exon-sc0000536-1491911889:111544..111959Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1510915933:111544..111959TCONS_00025459-exon-sc0000536-1510915933:111544..111959Clytia hemisphaericaexon
TCONS_00025459-exon-sc0000536-1575043694:111544..111959TCONS_00025459-exon-sc0000536-1575043694:111544..111959Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000536supercontigsc0000536:103395..111959 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.736818	0.764597	0.900866	0.460795	0.766665	1.02199	1.96138	1.50785	2.08708	1.94456	3.43477	2.39533	2.09877	2.89467	1.6456	1.82376	2.07847	2.74024	4.73167	3.98537	2.9794	2.80358	1.16344	1.81387	0.788659	1.0295	0.623328	1.14192	0.753896	0.409876
Blast
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BLAST of TCONS_00025459 vs. Swiss-Prot (Human)
Match: DAPP1 (Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide OS=Homo sapiens GN=DAPP1 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.064e-61
Identity = 106/218 (48.62%), Postives = 140/218 (64.22%), Query Frame = 2 
Query: 3944 WFHPNLNRHQTEALLLHNGQDGSYLIRSSTSHEGEYSLSVKCANSVKHFQIGWNGNEYVFGMGKFSNIEDFVSHFENKPLIGGETGVLILLRYPYPRHVEEPTKYDTIRVHAEWGNRPSSQHADD--AHIESLNSKEGYLTKQGGRRKNWKARWFVLERNLFRYYKTKGEAQPIRTLDLDKCLEIDQDFECGKDNTIKVVMPGRTFLIYASTPTEKDD 4591
            W+H NL RH  EALLL NG DGSYL+R S    G YSLSV+  +SVKHF + + G  + FG  +FS+++DFV HF N+PLIG ETG L++L++PYPR VEEP+ Y+++RVH       + +  DD      SL +KEGYLTKQGG  K WK RWF L RN  +Y+K +   +PIR LDL +C  +  D+   + N   +V P RTF + A T  E D+
Sbjct:   35 WYHGNLTRHAAEALLLSNGCDGSYLLRDSNETTGLYSLSVRAKDSVKHFHVEYTGYSFKFGFNEFSSLKDFVKHFANQPLIGSETGTLMVLKHPYPRKVEEPSIYESVRVHTA---MQTGRTEDDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADE 249
The following BLAST results are available for this feature:
BLAST of TCONS_00025459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPP11.064e-6148.62Dual adapter for phosphotyrosine and 3-phosphotyro... [more]
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