TCONS_00025147 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025147
Unique NameTCONS_00025147
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2109

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025147 ID=TCONS_00025147|Name=TCONS_00025147|organism=Clytia hemisphaerica|type=transcript|length=2109bp
atgGACAGTTGAAACTATGTATTACATCTGTGGGATGACGTTCAATCAGT
TGGACACTGACGACGAAAGTACCGAGAATGACCGACTTTTATCGAAGAAA
ACTCGCAAACAACGACAATCACCTAAATCTCAACGAAATCCCGAATCTCC
TAACAAAGATGCCTCAAAATGGGAACGGATTACATCAGCCATTAGAAAGA
GGCTGAAAAAAGATGGCCTTAGGATGGTCTTACTTATTATCTTGAATGGA
TTTTACCTCTACTTTGGTGGAGTGGTATTCTATTTGCTGGAGACGAAACC
AAAGTTTGTCGTGGATAAAAGGAAACACGTTGAAATGCTGTTCAACACTT
TTAAGAGTTTACATTTGACCGCTGACCACATGATGATGAATATCAGCAAT
ATTTCAACACATGACGTCAATAAAATATCATCTGTTCTGCAAAATATTCA
TTCTGAATTTtcagaaagtgaaagtgaaagctGGACAGTCACGAATGCTG
TCTTTTTTGCATCAACTGTTGTTACTACTATAGGTTACGGTAATATGGCG
CCCGTGACAACAGGAGGGCGTTGGTTTTGTGTATTTTACGCCATCGTTGG
CGTCCCGTTGACTGTCATGTTACTCGCacttgttggaaagataatttcgA
AATACATCAATCACTTGTGTAACTTCATTGTCAAAACGCTGAGGGAATAT
CTTTATTCCAAATATGAATATGAGCaGGTTGACGAAGGAACAGAGCTTCG
AGCACCAGTCTGGTTGGCTCTTCTCTTCATGCTTTTGGTGACTTCGATAT
TCGCACTGATGTTCATGAAGATGGAACAGTGGTCATTCTCCAAATCACTT
TATTTCATCTTCATTACGTTTACCACGATTGGTTTTGGTGATATTGTACC
ACATAATGATAATgCAATTTGGTTTAATGTCACTTTCCTTTACATTGGAC
TGGCTGCATTGTCCATTACCATAAACCTCTTGATTGCAAATATCACACAT
CAATAtcgaaaacataaacaaaaaattaagattgttCAGAAAATCGAAGA
AGAACTAGAGGACTCGGACGAGGAAACTTTACCGGCAGACGAAAATGGTG
ACGTCACCGAAATGGCAGATTTTACTAATGGTGGTAATGGTGGCGGTAAA
GTGGCGGGTGATTCCCTGCGACGTTTATCGAATACACCCGTTGATAATAA
TTCGAATAACAACGAAAACAATAATgataaaaatcttcaaaactttGGGG
ATGGACTATAAACGTTAATAGTTTTAggcagtctgtgccactaactcgat
cgggaagattcttccgaaatgggaagaaccttcccgaatGGGAAGAACTT
ACTCTAATTTTTCTCTGCCGgtttgggaagattcttcctctttgggaagt
tgaaaattgactgaatcttcggtgaagctgtacgatgaccggcgaaagtt
gaaaacttttggaggtgaaaaagcatcaaattttaaggtttttcaccgaa
agaaaaGTAGGCTTTACTGTAGAAAACTTGTTAGATTGTGAAAAAACTGC
GTAaacttcccaaacgggaagttCCAACCCGATCGACTTTTCCTTATTTT
CCCGCTTCTTCCCGATCTGGAAGTCCGTTTTTTAACTCTTACCCGTTTAG
GGTGTCAAGTTAATTTCTCattcgggaaggttcttcccatttcggaagaa
tcttcccgatcgagttagtggcacagactgttaGGTGTGTTGTATTAGTG
CGATTATAATAGTATGTCTTTTTATGTCCTATTACCATGAGTTTCACCTT
AGCTGGTGATTAAGATATTCACAGCGGTGAATGGTGAATTTTTTTGTCCC
TCCGTCTTCGCCAGACCAAAATACAACCCCTGTAGAAGTTAACATGCATT
CAGCTTTCAAAACAACACCGAGGAAAATGTAGTCACAGACAATGTAGTTT
GAATCGCGGCCCTCTATAGATAAACTccctatacacgtttttttttttat
tagaacacctaaaatttgtctgagcctggatgtgcttatttttttagcaa
ttttcagcctaaaatgttcttaaatgcgttcttaatttttcagactactc
taaatcgac
Run BLAST on NCBI

transcript from alignment at sc0000521:166715..177176-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025147 ID=TCONS_00025147|Name=TCONS_00025147|organism=Clytia hemisphaerica|type=transcript|length=10462bp|location=Sequence derived from alignment at sc0000521:166715..177176- (Clytia hemisphaerica)
ATGGACAGTTGAAACTATGTATTACATCTGTGGGTACGTACCCCTTCCAG
GGACAACTTCTAATAAATGGGCTAGATAGACGATTTCTTGAGTTGATGGG
CTACTTTGAATTTCTTGCTTTGAAGTTGTTCCTTACTGTTTAACGCGCAT
GTGTGCTTGACCTTGCTCACTTTTTTATGCCCTTTCTACACTGGGCCAAG
CATTGACACACCCCCTTCTCACAGACCCACTGGGACCCCTTCCCACTGGA
AAAATTGGCCAAAATATCGTCCCCGGTGGAAAAGTATCCTCCAATTTTTA
TCCCCGCTGAAAATAATCAAATTAAGCAATCCTCACTGCAAATAATTTAC
TATTTTTACCAACTCCACTGAACTTTCTGACTTGAAAACGAAAGAATTGA
AATCCCCATCCATAAAAAATATGAGAACATCAATCCTCATCGAGTTTCAG
TCCGTTATTTTTATCCCCACTGGCTGAAAAGTCCTACCGGGTCTGTGAGA
AGGGGGTGTATTGACATAACTGAGAGATCTTAAAACAATTAACCGTTACT
CTATTGCGTTACTTTCCTGTGCTCAGTTTTACCTTACGCAATCGCTGTGA
TATCCAACAATAATTGCCACTGTTGCCACGCTTGCCACGAGAACTTCAGC
TATAGGCCCCCGTGTACTGTGGAAAGTAGTACAATACTATTATAACATTA
TATGATTATAATGATGTCATTCTTTACGTAGTTGGTGTAATGTAATGAAC
TGAAAATCTTTAATACATATCGACACTTTTTTCAAACGCACGACAGTCCA
CTTCAGAATGACGCGAAAAAGAACGGCAACTCCAGAACACACGTATATCG
TGACTTAGCCAAAACTTTTGTTAATTTGATCGGACTTTTAAAGAAAAGAC
TTACACCAGATTTTCAAATCATAGCAAGGGTCTATAGTTTTGAGTTTTAA
AAAATTAATGGGCCTCCGATATGTTCCTAACACTAACATTTCTTTGTTGA
TAGAATGACCTTTACAAAATATTTTTAGCTAAATAAGCTTTCTGAGAAAT
AGTTTTAAGAAATCTGTCTTGATGGCACTACTAGAAGATGACAGCCGTTT
ATTAGATTTTTTTGATTTTATAAAGTTGAGAAAATTTAAATCATGACTTT
AACGCGAAGTAAAATATTTGTAAATTTTCGAATGACCAATTAAAATGGTT
AATTTGTGTAATCTGTGTATACTTATTAAAAAGATTATAATTTCGAAATG
GCGATGATAAGTAACCGAACTAAATGTATCTCTTTTCAACACAGAAGGAA
AAATGGTTGCGCAGGGTAAAATGTTCCGAGTGTTTGCTTTTTATTCTTTT
CACATTGAATTTCAGTTTAGTAGTTAGTAGCTAGAAACTTTAAATGTCTT
ATCACTTGAGTTGGTTAGTGTTTGATTTGTTCGAGGGTCACATTTAAAAT
ATTATGATCAAGAAGGACACGTTTTTTTATAAGATCATCCATTTTGAGTT
TTAAGCCTAATTATGTTCTTTAACCCTATTAGCCCCAAGCTTTTTTTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCTAGTTTTTCAAATTCATATTGTCAATACCTATCACGTGTCAA
AATTTGAAGATGATTGAAGAAATAGTTCAGAAATTATCAGCACTTTAAAA
TTTTGAGTTTTAAGCGATCTTAGCTGGATTTTATGTCATGTTTCACAATA
AAGTCATAAAACCTGATCTGGACAAGCTATAACCCTAAAATTTTGCACAA
ATACTCTTTAATAAGATTTTGTTAAAAGTCAGAAAGTTTCAAGTCGTTTA
AAAAGAATTTCACCGAGAAATACGCAAAAGAACACCAGCGTGGTAGATTC
TACCCCCCCCCTGGGGCTAATAGGGTTAAATGATCTTATTTTCACCACTT
TGTTAAGAAATTAGGTATTTTGGAGTCCACGAATTTGGTTTGAATGAAAA
ATCATATTTTCTCGTTTCCAGGATGACGTTCAATCAGTTGGACACTGACG
ACGAAATTACCGAGAATGACCGACTTTTAACGAAGAAAACTCGCAAACAA
CGACAATCACCTAAATCTCAACGAGATATNTCATATTTTCTCGTTTCCAG
GATGACGTTCAATCAGTTGGACACTGACGACGAAAGTACCGAGAATGACC
GACTTTTATCGAAGAAAACTCGCAAACAACGACAATCACCTAAATCTCAA
CGAAATCCCGAATCTCCTAACAAAGATGCCTCAAAATGGGAACGGATTAC
ATCAGCCATTAGAAAGAGGCTGAAAAAAGATGGCCTTAGGATGGTCTTAC
TTATTATCTTGAATGGATTTTACCTCTACTTTGGTGGAGTGGTATTCTAT
TTGCTGGAGACGAAACCAAAGTTTGTCGTGGATAAAAGGAAACACGTTGA
AATGCTGTTCAACACTTTTAAGGTTAGGTTCATTACAAGTTCAATCTGAC
GTTGCGTCATGTGGGATACTCCAAATTGTCACAAAATACACGTTTTTTTT
AGAATAAACTATATAAGAACATGAGGCTTCGATGGCCAAAATATTAGGAA
CAAGCTAAGAACATTTTAAGTCTTTTCAGACTCTCTAACACCAGATTACT
TAGGAAAATGGACAAAAAGACTCAGAAATGGTGAAAATAAGAATATGTTA
AGAACATTGTCAGGCTCAAAAATTTTGGGTGTTCACATAAATAAAAAAAC
GTGTACCTCGTTATCACTTTCAAAAGAGTGGCGCCCTCCCCTACCTTTGG
GTAGATAGCTATCGAAAGAGGGGCCTCCGGGTCGCCTCTGACTGCGGTTG
GAGACTTAATTAGTATGATAGATTGATGGGGAGCTCTACTTTACCATTCT
TTTCCTTTTCGTAGAGTTTACATTTGACCGCTGACCACATGATGATGAAT
ATCAGCAATATTTCAACACATGACGTCAATAAAATATCATCTGTTCTGCA
AAATATTCATTCTGAATTTTCAGAAAGTGAAAGTGAAAGCTGGACAGTCA
CGAATGCTGTCTTTTTTGCATCAACTGTTGTTACTACTATAGGTAAGTTT
TCGTTGCATTTACTGTTTTTCATGTTTGGTGGGGCGAGACCAGAAATAGG
TTGCACGCATCCTCTCTGATATATCACAGTGAATGCGTGTAGCCTGGACC
AAAAACAGAAAATTTTTAATTAGAAATGCTGTATTTTTTGTTTGGGAAAG
CCAGACCATTTTTTTTTGTTTGGGAAAGCGAGACCAGCGATTTTAATTTC
ACTTTTGGTCTATCAAAATTTCAAAATTAATTTTCTTCGAAAATTAAAAC
TTACTACAATCTGTTTCACACTTACGCGAATTGGACATTCCATTTTATAT
CCATACAGGGGGTGGACGAACATTTCCAGAGGGTTATCCGAGAAAGATTT
CCAGGTGTGTTGTTTCAATTTCCAAGGGGGTAAAAAGTTATTCTAAAATT
TCCAGGGGGTAAAAGACTGATTTTAATTCGTCCACCCTTATTTAAGATAT
GAGAAGAATTTTTCCAAGGGAAATTTTGCAAATTTTTGCCCTTTTCTAGG
GGGTATCCACACATTTTCAATAATTTTCAGGTTCGGTTTTAGGTTCGTCC
ACCCCCCTGTGTGGTTTTTTAATGGAACAGCCCAATGTATCGTCCGAACT
GACAAAGAAACATCATATAATTTTTCCTGTGAAAATGTCAACAATGTCAA
AGGAAAAATTATATGATCTTACATACTTTACTTTTTCGACAATTTCCCTG
CATCCACTCTTATGCTAAAGTAAAAAAATTATGCACCGTTGGAAAGATAT
CTTGGGGGAGAACGATCTAAAATATTTTAGACTTAGAGGAGGTTTAAATA
TTCTAAGAAGTGTCAGGGTTTAAGAGATTGAAATTGTTGAAAAATTTAGT
GTCCACATACATTCGAGATGACTTTAATTCTTTATTATTTAGAAGGATAA
GCTTTTAAATTAGGTTGTCCATTGTATCTCTGAAATTAAAAAAAATAGCT
TCCTTCATTTTTTAGCAGATTCACTACTTAACAGAATTTTTTTTTCGTTA
CCTAGGTTACGGTAATATGGCGCCCGTGACAACAGGAGGGCGTTGGTTTT
GTGTATTTTACGCCATCGTTGGCGTCCCGTTGACTGTCATGTTACTCGCA
CTTGTTGGAAAGATAATTTCGAAATACATCAATCACTTGTGTAACTTCAT
TGTCAAAACGCTGAGGGAATATCTTTATTCCAAATATGAATATGAGCAGT
AAGTTTTTCTTTTCCTATTTATAACTCCGAGGAGGGATATCCAATAGGGT
ATATTCCGTAGGCGAGTGCGTTTTATTTTTGCGCACGTGTTCTATGCGAA
AATTAAGGTATGGTAACAGTGGTCTCTAATGTTGCACTAAAGTTGTAATC
TAACAGCCAATTCAATTGACTTCAAAATGTGCCATTTTTGCCCTGATTGC
CAATTATTTTGCATTCGATTGACAAAAATTTGGCAAATGTGGCAAAATTT
GAGTGCCATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTTGGCA
TTTTTGGAACTTACCTCCATACGTCTCCATGCAAAACACTGTTCCCACGA
GACCTGTGTTCTTTTCGCTCCAATTTTGCCACTTTTGCCAAAAAATAGAA
GACCTTCCAATGCTAAAGCAAAACAGTGCCGATCGGCAATTTGATTGGTT
AAAAAATCGTTTGTTTCCAAACGCCGACAGAAAACTGCTGACCAAGCATC
ACAAAACGGAAATCATAATGGCGGCGTGGCGATGTACAAATTTGCCATAA
AGCTGTGATCTTTTGACATTGAAATTGTAGATTTGGCAAAGTTGGCGAGT
ATGGCAAATTTGGAAGTCGATCGAATTGGCTGTAAATCTAAAGTTGCACT
TTTGATTCCTGATCCGAACGCTGTTGTTGGTTGGAGCTTCTCGTTATTAG
AATGGCGTATCAGGCAAAATAGCTCTTTTCATAAATTACGTCACGATCAG
CGCTTACCTCTTTTTCAAAATATTGCTATGGTAATTGATTCGCAAAGGAG
TTCATAAAACGTTACTCTATTTCTAGAAGTAATAACTGGAGACTCAAGGG
GTTAAATAACCTATGGTTTCCACTGACCTTTATATATCCCTGGACCAAGA
AATATCCGCCATCTTTGATTGGAGTTTTTTTGGAATTGGTACCAGAGAGG
AATTAACGTCTAACGCCGCTACATCGTTAAAAGAATTTGAGAAAAAGTAG
ACCTAGCGCTCTTGATGCATTTACACCACTATCAAGTAGCGCCGCCATTA
GGGTACCACTTTTCAAAAAACTCCGATCAAAGATTTTGCTTAGCTGGAAT
TGGGAAGCTTGGTCCAGGGTATATAAAGGTCAGTGATGGTTTCCAATTGG
ACTCAATAATATGGCTGTTTTTCGGCTTGAAAATTGAATAATGCTGCATT
CGAAGCTATTGAACTTTTCAATCCATTCTTCTTATTCACCAGGGTTGACG
AAGGAACAGAGCTTCGAGCACCAGTCTGGTTGGCTCTTCTCTTCATGCTT
TTGGTGACTTCGATATTCGCACTGATGTTCATGAAGATGGAACAGTGGTC
ATTCTCCAAATCACTTTATTTCATCTTCATTACGTTTACCACGATTGGTT
TTGGTGATATTGTACCACATAATGATAATGTAAGTTTTTTTCATTCCGAT
TTCCCCGATTTTTACCACCTACAACATAGATTTTTCGCTCAATTTTCTAT
TCTAAAACCATTTGCAAACGTGCTTTACTGCCATTGCGATTTTGCCATGT
CTTTGGCATAATTGCCATATAGAATGATTTCACCGATTAAGCAGAGTTCG
TTCGTACTGACAAACATTTCTAAGAGAGAAACTTTATCAAAACTATTTTT
GGCAACTATGGCTTGGACAAACACTCTCACTCTTTCATAGACCTTTATTA
AGTAGACTATTGTTTCAGTTTTAAATATAGTAAGAGGTAGAATAGCAAAG
AGTCATATCACTATATTTCATTCAGAGTAGAAATCAATTCAGGAACTCCC
AAAGCTGCACTCTTAACTACACTGCTCAGCACACTAATATTTCACCCAGA
GTAGAAACTTATCCAGGAACTTTTCAAAGTTGCACTTCTAAGTGCACTGC
TAAGCGCGAGGCTCAGCGCACTAATATTTCAACCAGAGTAGAAATCAATT
CAGGAACTGTTCAAAGTTGCACTCCTAAGTACNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAATTAACGTCTAACGCCG
CTACATCGTTAAAAGAATTTGAGAAAAAGTAGACCTAGCGCTCTTGATGC
ATTTACACCACTATCAAGTAGTGCCGCCATTAGGGTACCACTTTTCAAAA
AACTCCGATCAAAGATTTTGCTTAGCTGGAATTGGGAAGCTTGGCCCAGG
GTATATAAAGGTCAGTGATGGTTTCCAATTGGACTCAATAATATGGCTGT
TTTTCGGCTTGAAAATTGAATAATGCTGCATTCGAAGCTATTGAACTTTT
CAATCCATTCTTCTTATTCACCAGGGTTGACGAAGGAACAGAGCTTCGAG
CACCAGTCTGGTTGGCTCTTCTCTTCATGCTTTTGGTGACTTCGATATTC
GCACTGATGTTCATGAAGATGGAACAGTGGTCATTCTCCAAATCACTTTA
TTTCATCTTCATTACGTTTACCACGATTGGTTTTGGTGATATTGTACCAC
ATAATGATAATGTAAGTTTTTTTCATTCCGATTTCCCCGATTTTTACCAC
CTACAACATAGATTTTTCGCTCAATTTTCTATTCTAAAACCATTTGCAAA
CGTGTTTTACTGCCATTGCGATTTTGCCATGTCTTTGGCATAATTGCCAT
ATAGAATGATTTCACCGATTAAGCAGAGTTCGTTCGTACTGACAAACATT
TCTAAGAGAGAAACTTTATCAAAACTATTTTTGGCAACTATGGCTTGGAC
AAACACTCTCACTCTTTCATAGACCTTTATTAAGTAGACTATTGTTTCAG
TTTTAAATATAGTAAGAGGTAGAATAGCAAAGAGTCATATCACTATATTT
CATTCAGAGTAGAAATCAATTCAGGAACTCCCAAAGCTGCACTCTTAACT
ACACTGCTCAGCACACTAATATTTCACCCAGAGTAGAAACTTATCCAGGA
ACTTTTCAAAGTTGCACTTCTAAGTGCACTGCTTAGCGCGAGGCTCAGCG
CACTAGTATTTTAACCAGAGTAGAAATCAATTCAGGAACTTTTCAAAGCT
GCACTCCTAGTGTACTCTCTCAGAACACTAATATTTCATCCAGAGTAGAA
ATCAATTCAGGAACTTTTCAAAGCTGCACTCCTAGTGTACTCTCTCAGAA
CACTAATATTTCATCCAGAGTAGAAATCAATTCAGGAACTTTTCAAAGCT
GCACTCCTAGTGTACTCTCTCAGAACACTAATATTTCATCCAGAGTAGAA
ATCAATTCAGAAACTGTTCAAAGTTGCACTCCTAAGTACTCTTCCAGCAC
AACTAATATTTCATCCATTAGTAGAAATCAATTCAGGAACTGTTCAAAGT
TGCACTTAAGTACACTGCTCAGCACTACTAATATTTTGGCTGGAGTAGAA
ACTAATTCAAGCAGCATCAATGATTACAAACTACCAACACACCACAGTAA
ATGAAAAGTCTAGAAACTATAGCATTAATACAAACACCAGCAAACACTAC
TAAAAACATACACAAACTGAAATTCTTAATTCAGAAAAAGAATTTAAGAA
AGTACCGTATTTCTTCGAATAAACGCTACTGGCGTTTATGAAATTTTTAG
GATTTTAAAAGAGGCGTTTAATTCTGGGGGAGTTTAAAAGAAGGGGTGTT
TATTGAATAATTTTCAACCAAGGTCACTTTGATAAAGTTAAGTGGAGATT
CGAGCGGGAGGGAGGGGGGCGTTTAAAAGAAGGGGTGTTTATTGAATAAT
TTTCAACCAAGGTCACTTTGATAAAGTTAAGTGGAGATTCGAGCGGGAGG
GAGGGGGGCGTTTAAAAGAAGGGGGGTTTATTCGAAGTAATACGGTACAC
TGTTTTTCTTTATCAGGCAATTTGGTTTAATGTCACTTTCCTTTACATTG
GACTGGCTGCATTGTCCATTACCATAAACCTCTTGATTGCAAATATCACA
CATCAATATCGAAAACATAAACAAAAAATTAAGATTGTTCAGAAAATCGA
AGAAGAACTAGAGGACTCGGACGAGGAAACTTTACCGGCAGACGAAAATG
GTGACGTCACCGAAATGGCAGATTTTACTAATGGTGGTAATGGTGGCGGT
AAAGTGGCGGGTGATTCCCTGCGACGTTTATCGAATACACCCGTTGATAA
TAATTCGAATAACAACGAAAACAATAATGATAAAAATCTTCAAAACTTTG
GGGATGGACTATAAACGTTAATAGTTTTAGGCAGTCTGTGCCACTAACTC
GATCGGGAAGATTCTTCCGAAATGGGAAGAACCTTCCCGAATGGGAAGAA
CTTACTCTAATTTTTCTCTGCCGGTTTGGGAAGATTCTTCCTCTTTGGGA
AGTTGAAAATTGACTGAATCTTCGGTGAAGCTGTACGATGACCGGCGAAA
GTTGAAAACTTTTGGAGGTGAAAAAGCATCAAATTTTAAGGTTTTTCACC
GAAAGAAAAGTAGGCTTTACTGTAGAAAACTTGTTAGATTGTGAAAAAAC
TGCGTAAACTTCCCAAACGGGAAGTTCCAACCCGATCGACTTTTCCTTAT
TTTCCCGCTTCTTCCCGATCTGGAAGTCCGTTTTTTAACTCTTACCCGTT
TAGGGTGTCAAGTTAATTTCTCATTCGGGAAGGTTCTTCCCATTTCGGAA
GAATCTTCCCGATCGAGTTAGTGGCACAGACTGTTAGGTGTGTTGTATTA
GTGCGATTATAATAGTATGTCTTTTTATGTCCTATTACCATGAGTTTCAC
CTTAGCTGGTGATTAAGATATTCACAGCGGTGAATGGTGAATTTTTTTGT
CCCTCCGTCTTCGCCAGACCAAAATACAACCCCTGTAGAAGTTAACATGC
ATTCAGCTTTCAAAACAACACCGAGGAAAATGTAGTCACAGACAATGTAG
TTTGAATCGCGGCCCTCTATAGATAAACTCCCTATACACGTTTTTTTTTT
TATTAGAACACCTAAAATTTGTCTGAGCCTGGATGTGCTTATTTTTTTAG
CAATTTTCAGCCTAAAATGTTCTTAAATGCGTTCTTAATTTTTCAGACTA
CTCTAAATCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014119XLOC_014119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025147-exon-sc0000521-1575043694:177144..177176TCONS_00025147-exon-sc0000521-1575043694:177144..177176Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1575043694:174055..174376TCONS_00025147-exon-sc0000521-1575043694:174055..174376Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1575043694:173435..173612TCONS_00025147-exon-sc0000521-1575043694:173435..173612Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1575043694:172229..172421TCONS_00025147-exon-sc0000521-1575043694:172229..172421Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1575043694:170448..170634TCONS_00025147-exon-sc0000521-1575043694:170448..170634Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1575043694:166715..167910TCONS_00025147-exon-sc0000521-1575043694:166715..167910Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1510915933:177144..177176TCONS_00025147-exon-sc0000521-1510915933:177144..177176Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1510915933:174055..174376TCONS_00025147-exon-sc0000521-1510915933:174055..174376Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1510915933:173435..173612TCONS_00025147-exon-sc0000521-1510915933:173435..173612Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1510915933:172229..172421TCONS_00025147-exon-sc0000521-1510915933:172229..172421Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1510915933:170448..170634TCONS_00025147-exon-sc0000521-1510915933:170448..170634Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1510915933:166715..167910TCONS_00025147-exon-sc0000521-1510915933:166715..167910Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1491911889:177144..177176TCONS_00025147-exon-sc0000521-1491911889:177144..177176Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1491911889:174055..174376TCONS_00025147-exon-sc0000521-1491911889:174055..174376Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1491911889:173435..173612TCONS_00025147-exon-sc0000521-1491911889:173435..173612Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1491911889:172229..172421TCONS_00025147-exon-sc0000521-1491911889:172229..172421Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1491911889:170448..170634TCONS_00025147-exon-sc0000521-1491911889:170448..170634Clytia hemisphaericaexon
TCONS_00025147-exon-sc0000521-1491911889:166715..167910TCONS_00025147-exon-sc0000521-1491911889:166715..167910Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000521supercontigsc0000521:166715..177176 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.723822	0	0.398271	0.137599	1.20508	0.969976	0.834086	0.918295	0.512062	0.73678	0.876361	0.542784	0.462637	0	0.349692	0.211454	0.267943	0.492971	0.347405	1.5049	0.230725	0.291505	0	0.781071	0	0.545399	1.05566	0.891119	0.320121	0.386013
Blast
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BLAST of TCONS_00025147 vs. Swiss-Prot (Human)
Match: KCNK3 (Potassium channel subfamily K member 3 OS=Homo sapiens GN=KCNK3 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.891e-21
Identity = 76/269 (28.25%), Postives = 132/269 (49.07%), Query Frame = 2 
Query:  203 LKKDGLRMVLLIILNGFYLYFGGVVFYLLETKPKFVVDKRKHVEMLFNTFKSLHLTADHMMMNISNISTHDVNKISSVLQNIHXXXXXXXXXXWTVTNAVFFASTVVTTIGYGNMAPVTTGGRWFCVFYAIVGVPLTVMLLALVGKIISKYINHLCNFIVKTLREYLYSKYEYEQVDEGTELRAPVWLALLFMLLVTSIFALMFMKMEQWSFSKSLYXXXXXXXXXGFGDIVP-HNDNAI-----WFNVTFLYI--GLAALSITINLLI 985
            +K+  +R + LI+    YL  G  VF  LE++P+ +  +R+ +E+     ++ +        N+S     ++ ++   L+             W    + +FA TV+TTIGYG+ AP T GG+ FC+FYA++G+PLT+++   +G+ I+  + +L +   K L           + D    +   V +     +    I A  F   E W+F ++ Y+ FIT TTIGFGD V    D A+     +   +F+YI  GL  +   +NL++
Sbjct:    1 MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELI--ERQRLELRQQELRARY--------NLSQGGYEELERVVLRLKP------HKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGL--------GMRRAD--VSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNLVV 243
The following BLAST results are available for this feature:
BLAST of TCONS_00025147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNK32.891e-2128.25Potassium channel subfamily K member 3 OS=Homo sap... [more]
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