TCONS_00025018 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025018
Unique NameTCONS_00025018
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025018 ID=TCONS_00025018|Name=TCONS_00025018|organism=Clytia hemisphaerica|type=transcript|length=3743bp
CACCTGGTCGGCCAGTTTGCACAACGAAAAGCGAGTTGTTCGAGCAAGCG
TGTACTGATTTTCTTCAAGATGATGTCGAATTGTATACAGTTACAGAGTT
TCACAATATGATGTCTTCCCTTGGCGATGAAGTATATTCcgtgaaaatga
ccaaaaataaaTTGGAAGAAAAGTACAAAAATTGCATTAACTTTGTTTCC
AGAGAAGGAAAAAGCAATATTATATTACTGAACAGAGCTGCTGAAGTACT
ATCGGAGAAATGGTACAAAGAAAGACAAAATGGAATCGGTGATGAAACTA
TTCGTATTGTAAGAACAGCTGGAGTTTTGTTAAAAGAAGCCatcaaaaat
tacgaaaatgacTCAACAACTTACCCAACATGCGACGATATAAGATCACC
AATGAATCACGTACCcaatcttttgaaaatgtttttgaatgaacttTTCA
CAACTGAAATCAAACAAGCAATAATATCACATGCAATCGTCGCTGCAACA
AGACCAAGAACTATCATGCCACTACAGTTCGGACTGGCAATCTCAACGGA
CAATCAAATTGGATCTAAATGGCTAAACATTCGGTTATCAAGATTGGGGC
TATCAGTTAGCTATGACGAGGTGACTATactgaaatttttctaaaaggac
AGGATCCCCTGCATTTAAACACTTTTACCAGTTTACAGTAGATgaccaat
gttgtttcaacaCTTTTCTGTCATAGTGAATATCAAATTACAAGTCATTT
TCTATAAACTTTCTTTTCACAGGTGATACGATTCAAACAAAATGTCATCA
AGCATGACAAGTCACGCGAAATCATGTCTCCTGAAGGAACAACCTTTATG
CAATACGTGTCGGACAATTCCGATCAACAAATGGCTACTCTGGATGGCAA
AAAAACCCATCACGGATTAGGATCCTTGGCCATCGCAAATGGAAATTTCA
CTGATTACAACTTACCGTGTCATCGTATCCCACGAGATAAACGGGAAAAA
TGGGAAGACGTCGAAGGAAATAATGGAATCGAAATCCATGAATACCACGA
GCCCGAAACATCTGCACTATCAAAAACAATGTTCAAACCAATACAGGGGG
AAATTGCCGACATTCCATTTTATCGATCTGCTTTGGACATCGAGTTATCT
TTTCAAAGAAATGTGCCCAAGTTGGTCTGGATACATGAGTTCCAAAGTTA
ACGAACAACCGTTGCCAAAATCACGTGTGACCATGCTTCCAATCATAGAT
TTGCATGCCACCGATCCAACAGCAATCTATTCTTTACTTCTTTACTTAAT
CGACCAAAGTAAGAAGCTCCGAATCAATTTACCATGTGTCACCTTTGACC
AACAATTGTACATCAAAGCATACGAGATTGTTATGTCGAAGAAGCTACAC
GTATTTGTTCGACTTGGAGGCTTTCACCAATTGATGAGCTTTCTTGGTTC
GATTGGAAACCTTATGCAGGGATCTGGGTTGAACAAAGCTCTCGAAACAG
TTTATGCACCTGTAACAGTTGGACATATGTTCACTGGAAAAGCATATTCC
AGATCCGTTCGTGGTCATCTACTTTGTGCAACTGGCGTACAATTGAAGAG
TTCTGGAACAGGCTCaccaacaaagaaaaagaagaactgGAGCAGTGCTA
CAATGCTATTGATCCCTCCGTGCACGAAGGAGAAGAAATCAGCACCAAGC
TAAGCAAATGGGTTGAAGCTAAACATAAAGAGTTATCAGAATCATCCAGG
ACAGCTGCCCTATGGTCAAGCTACATCCGTTACGTCAACGTTGTGCAAGA
TTTCATCAGGGCAGAAAGAACTAATGATTGGAAATTGCACATCTCCTCAA
CCTATGCCATGCTCAATCTTTTTGCTGCAACAGGACACAACAACTACGCT
AAGTCCTGCAGATTGTATCTTCAATCTGTCACTGAATTGGAAACTGCGCA
ACCGGAGGTGTACGATCAGATGTTGAAGGGTAACCACACTGTCCGAAGAA
CCCTAAAGAATTGGGCTGGTCTTTGGACAGATCTTTCGATTGAACAAATA
TTGATGAAGTCTTTGAAGGGTAGATCGGGAGTCGTGGCTAAAGGAATTAC
CGAAAACGTTTTACAAGTCTGGACTAAAACGATGCACCGATGTGCGGAAA
TATCAGACGCCATGAACACAATCGTCTCAACCAAACCACAATCAACACCT
AAACACAAAGAACTGTTTGTTGGTAGAATCAAGCGAGATTACGAAGATTT
CCTCAAAATTAAGAGCTGGTTTGATGACCGAAACCCATTTACCATCAGTA
AAGATCTTATTTCACTGGACACAGGGCTGGTAGACCTAGAAAACCGATTG
ACATGTGACAAAGCCGACACAATCGGGGCTGCTATCCACAAAGAATTAGA
AGATCAATCGTATTCTGGATGTACCATAAAACGAAGTAAACAAATTACAA
ATTTGCAAAGCTTGTATTCCAACGTCAGCATCGAGAAAGAAAAAGTATCC
GTCGACCCGCTGACTCTCTTCCTACGTCTGATCGTCCTAGTTGAACGAAA
GCCTGAGAATGATATCGTTGATTACTTCAATTACGAGTTATCGCCATATC
CAATGTCCCTGTTCAAAGATGGCATCATGCGAACATCACCGAAATCAGTT
TTAAAACCATACCTTAGAAGTGGGAATCCCGCTGTTAGCATTCCAGAAAC
AACTCGTATTGTTGATGGTGGTGGTCTGCTGTGGTGTTGTGACTGGAAAA
GAGATGAAACATTCCTCGTCATTTTTCAAAGGTATGCAGTATTTCTCACA
AATCACAACATCGATACAATAGTTTTTGACGGATACAGCTTGTCGACTAA
AGATTCAACACACCAAAAGCGATCTGGGACTGCTTCTCAAGAAGTCGAAA
TCAAAGAGGCGAATCCTTGTCCAGCCAACAGAAAAACCTTTCTTGGGAAC
TACCATAACAAAGAAAGATTTGTTGCATGCCTGGCAGGTTACCTAAGAGA
GCGCAACTTCAAAGTGGTCGAGTGTCCAAGCGATGCAGACACAACCATTG
TCAAAGAGGCGTTGAATGCTGCTAAGGATTCGTCTGTTGTTATCTACTCT
GACGACACTGATATTCTTTGTTTGCTGTTGCATCACATCGCCAAAGATTC
GTCACTGAAGGAGATTTTCATGGTCGATATGACTAAAAAGAAAGGCAAGC
AAAGAGAATGCTACAACGTATCAGAAATTCTCCAAAGCAACACACGTATT
GCCGATTTCATTTTGTTTGCCCACGCATTCACTGGTTGTGATACGACATC
GGCAATTCACAATTTCGGAAAGACGTCAATCTTCAACAAAATAGAAGAAT
CAACCGAAATTCAGTCACTCGTCAGAGAATTCTACAAAGATAATTCTCCC
GAGAAAATTGGTGATATCGCGATAAGGCTGTTTGAACTCTTGTACTCTTC
AACGGATACATTGCCAACTATACGGAAGAAGAAGTACGAGCAAATGGTTT
TGTCAAATCGTGCTGTCATCGACCCTTCAATGCTACCGCCATCACCTAGG
GCAGCTTATTACCATGGCTTACGCGTGTATCACCAGTTGAAAGTATGGCG
AGAGCTCAGAAATACCGACAACATGCCACTTAACTGGGGGTGGCAGATGG
TGGCTGAATCCTTTACTCCAATCATGACAGATATCAAAGCTGGTCTCTCT
GATCTATTGAAAGTTATTCGTTGTGGCTGTAAAGGTATGTGTG
Run BLAST on NCBI

protein sequence of TCONS_00025018-protein

>TCONS_00025018-protein ID=TCONS_00025018-protein|Name=TCONS_00025018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=628bp
MLNLFAATGHNNYAKSCRLYLQSVTELETAQPEVYDQMLKGNHTVRRTLK
NWAGLWTDLSIEQILMKSLKGRSGVVAKGITENVLQVWTKTMHRCAEISD
AMNTIVSTKPQSTPKHKELFVGRIKRDYEDFLKIKSWFDDRNPFTISKDL
ISLDTGLVDLENRLTCDKADTIGAAIHKELEDQSYSGCTIKRSKQITNLQ
SLYSNVSIEKEKVSVDPLTLFLRLIVLVERKPENDIVDYFNYELSPYPMS
LFKDGIMRTSPKSVLKPYLRSGNPAVSIPETTRIVDGGGLLWCCDWKRDE
TFLVIFQRYAVFLTNHNIDTIVFDGYSLSTKDSTHQKRSGTASQEVEIKE
ANPCPANRKTFLGNYHNKERFVACLAGYLRERNFKVVECPSDADTTIVKE
ALNAAKDSSVVIYSDDTDILCLLLHHIAKDSSLKEIFMVDMTKKKGKQRE
CYNVSEILQSNTRIADFILFAHAFTGCDTTSAIHNFGKTSIFNKIEESTE
IQSLVREFYKDNSPEKIGDIAIRLFELLYSSTDTLPTIRKKKYEQMVLSN
RAVIDPSMLPPSPRAAYYHGLRVYHQLKVWRELRNTDNMPLNWGWQMVAE
SFTPIMTDIKAGLSDLLKVIRCGCKGMC
Run BLAST on NCBI

transcript from alignment at sc0000515:52379..56449-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025018 ID=TCONS_00025018|Name=TCONS_00025018|organism=Clytia hemisphaerica|type=transcript|length=4071bp|location=Sequence derived from alignment at sc0000515:52379..56449- (Clytia hemisphaerica)
CACCTGGTCGGCCAGTTTGCACAACGAAAAGCGAGTTGTTCGAGCAAGCG TGTACTGATTTTCTTCAAGATGATGTCGAATTGTATACAGTTACAGAGTT TCACAATATGATGTCTTCCCTTGGCGATGAAGTATATTCCGTGAAAATGA CCAAAAATAAATTGGAAGAAAAGTACAAAAATTGCATTAACTTTGTTTCC AGAGAAGGAAAAAGCAATATTATATTACTGAACAGAGCTGCTGAAGTACT ATCGGAGAAATGGTACAAAGAAAGACAAAATGGAATCGGTGATGAAACTA TTCGTATTGTAAGAACAGCTGGAGTTTTGTTAAAAGAAGCCATCAAAAAT TACGAAAATGACTCAACAACTTACCCAACATGCGACGATATAAGATCACC AATGAATCACGTACCCAATCTTTTGAAAATGTTTTTGAATGAACTTTTCA CAACTGAAATCAAACAAGCAATAATATCACATGCAATCGTCGCTGCAACA AGACCAAGAACTATCATGCCACTACAGTTCGGACTGGCAATCTCAACGGA CAATCAAATTGGATCTAAATGGCTAAACATTCGGTTATCAAGATTGGGGC TATCAGTTAGCTATGACGAGGTGACTATACTGAAATTTTTCTAAAAGGAC AGGATCCCCTGCATTTAAACACTTTTACCAGTTTACAGTAGATGACCAAT GTTGTTTCAACACTTTTCTGTCATAGTGAATATCAAATTACAAGTCATTT TCTATAAACTTTCTTTTCACAGGTGATACGATTCAAACAAAATGTCATCA AGCATGACAAGTCACGCGAAATCATGTCTCCTGAAGGAACAACCTTTATG CAATACGTGTCGGACAATTCCGATCAACAAATGGCTACTCTGGATGGCAA AAAAACCCATCACGGATTAGGATCCTTGGCCATCGCAAATGGAAATTTCA CTGATTACAACTTACCGTGTCATCGTATCCCACGAGATAAACGGGAAAAA TGGGAAGACGTCGAAGGAAATAATGGAATCGAAATCCATGAATACCACGA GCCCGAAACATCTGCACTATCAAAAACAATGTTCAAACCAATACAGGTAA AGAAATTTCATAATATCCTCACGATCATAAGTAAGTCTAGCCCTTGTATC TGTATTTCTCTTCTGTTTTTTTGTCTACGCATCAAGTATCTCTTACTAAA TTTATACTCAATACTTATTTCATAGGGGAAATTGCCGACATTCCATTTTA TCGATCTGCTTTGGACATCGAGTTATCTTTTCAAAGAAATGTGCCCAAGT TGGTCTGGATACATGAGTTCCAAAGTTAACGAACAACCGTTGCCAAAATC ACGTGTGACCATGCTTCCAATCATAGATTTGCATGCCACCGATCCAACAG CAATCTATTCTTTACTTCTTTACTTAATCGACCAAAGTAAGAAGCTCCGA ATCAATTTACCATGTGTCACCTTTGACCAACAATTGTACATCAAAGCATA CGAGATTGTTATGTCGAAGAAGCTACACGTATTTGTTCGACTTGGAGGCT TTCACCAATTGATGAGCTTTCTTGGTTCGATTGGAAACCTTATGCAGGGA TCTGGGTTGAACAAAGCTCTCGAAACAGTTTATGCACCTGTAACAGTTGG ACATATGTTCACTGGAAAAGCATATTCCAGATCCGTTCGTGGTCATCTAC TTTGTGCAACTGGCGTACAATTGAAGAGTTCTGGAACAGGCTCACCAACA AAGAAAAAGAAGAACTGGAGCAGTGCTACAATGCTATTGATCCCTCCGTG CACGAAGGAGAAGAAATCAGCACCAAGCTAAGCAAATGGGTTGAAGCTAA ACATAAAGAGTTATCAGAATCATCCAGGACAGCTGCCCTATGGTCAAGCT ACATCCGTTACGTCAACGTTGTGCAAGATTTCATCAGGGCAGAAAGAACT AATGATTGGAAATTGCACATCTCCTCAACCTATGCCATGCTCAATCTTTT TGCTGCAACAGGACACAACAACTACGCTAAGTCCTGCAGATTGTATCTTC AATCTGTCACTGAATTGGAAACTGCGCAACCGGAGGTGTACGATCAGATG TTGAAGGGTAACCACACTGTCCGAAGAACCCTAAAGAATTGGGCTGGTCT TTGGACAGATCTTTCGATTGAACAAATATTGATGAAGTCTTTGAAGGGTA GATCGGGAGTCGTGGCTAAAGGAATTACCGAAAACGTTTTACAAGTCTGG ACTAAAACGATGCACCGATGTGCGGAAATATCAGACGCCATGAACACAAT CGTCTCAACCAAACCACAATCAACACCTAAACACAAAGAACTGTTTGTTG GTAGAATCAAGCGAGATTACGAAGATTTCCTCAAAATTAAGGTAACTTTC ATTTTTTCTGATTTCTAAATTCTTTCCATTCCTATTCTAACTGTGCTTGC ATGACTATTGCCTGGCCTACTTAGTTTTATGGGTCTCTTGTTGTTTGGAT CGCTGATTTAAACAAGGGACTCCAAGTCTAACCTAGCTGAATTACCCATT ACAAAAGTTGTATTTAACGAGAATAAATACTTTGGTTTCAGAGCTGGTTT GATGACCGAAACCCATTTACCATCAGTAAAGATCTTATTTCACTGGACAC AGGGCTGGTAGACCTAGAAAACCGATTGACATGTGACAAAGCCGACACAA TCGGGGCTGCTATCCACAAAGAATTAGAAGATCAATCGTATTCTGGATGT ACCATAAAACGAAGTAAACAAATTACAAATTTGCAAAGCTTGTATTCCAA CGTCAGCATCGAGAAAGAAAAAGTATCCGTCGACCCGCTGACTCTCTTCC TACGTCTGATCGTCCTAGTTGAACGAAAGCCTGAGAATGATATCGTTGAT TACTTCAATTACGAGTTATCGCCATATCCAATGTCCCTGTTCAAAGATGG CATCATGCGAACATCACCGAAATCAGTTTTAAAACCATACCTTAGAAGTG GGAATCCCGCTGTTAGCATTCCAGAAACAACTCGTATTGTTGATGGTGGT GGTCTGCTGTGGTGTTGTGACTGGAAAAGAGATGAAACATTCCTCGTCAT TTTTCAAAGGTATGCAGTATTTCTCACAAATCACAACATCGATACAATAG TTTTTGACGGATACAGCTTGTCGACTAAAGATTCAACACACCAAAAGCGA TCTGGGACTGCTTCTCAAGAAGTCGAAATCAAAGAGGCGAATCCTTGTCC AGCCAACAGAAAAACCTTTCTTGGGAACTACCATAACAAAGAAAGATTTG TTGCATGCCTGGCAGGTTACCTAAGAGAGCGCAACTTCAAAGTGGTCGAG TGTCCAAGCGATGCAGACACAACCATTGTCAAAGAGGCGTTGAATGCTGC TAAGGATTCGTCTGTTGTTATCTACTCTGACGACACTGATATTCTTTGTT TGCTGTTGCATCACATCGCCAAAGATTCGTCACTGAAGGAGATTTTCATG GTCGATATGACTAAAAAGAAAGGCAAGCAAAGAGAATGCTACAACGTATC AGAAATTCTCCAAAGCAACACACGTATTGCCGATTTCATTTTGTTTGCCC ACGCATTCACTGGTTGTGATACGACATCGGCAATTCACAATTTCGGAAAG ACGTCAATCTTCAACAAAATAGAAGAATCAACCGAAATTCAGTCACTCGT CAGAGAATTCTACAAAGATAATTCTCCCGAGAAAATTGGTGATATCGCGA TAAGGCTGTTTGAACTCTTGTACTCTTCAACGGATACATTGCCAACTATA CGGAAGAAGAAGTACGAGCAAATGGTTTTGTCAAATCGTGCTGTCATCGA CCCTTCAATGCTACCGCCATCACCTAGGGCAGCTTATTACCATGGCTTAC GCGTGTATCACCAGTTGAAAGTATGGCGAGAGCTCAGAAATACCGACAAC ATGCCACTTAACTGGGGGTGGCAGATGGTGGCTGAATCCTTTACTCCAAT CATGACAGATATCAAAGCTGGTCTCTCTGATCTATTGAAAGTTATTCGTT GTGGCTGTAAAGGTATGTGTG

Coding sequence (CDS) from alignment at sc0000515:52379..56449-

>TCONS_00025018 ID=TCONS_00025018|Name=TCONS_00025018|organism=Clytia hemisphaerica|type=CDS|length=3768bp|location=Sequence derived from alignment at sc0000515:52379..56449- (Clytia hemisphaerica)
AGCTGGTTTGATGACCGAAACCCATTTACCATCAGTAAAGATCTTATTTC
ACTGGACACAGGGCTGGTAGACCTAGAAAACCGATTGACATGTGACAAAG
CCGACACAATCGGGGCTGCTATCCACAAAGAATTAGAAGATCAATCGTAT
TCTGGATGTACCATAAAACGAAGTAAACAAATTACAAATTTGCAAAGCTT
GTATTCCAACGTCAGCATCGAGAAAGAAAAAGTATCCGTCGACCCGCTGA
CTCTCTTCCTACGTCTGATCGTCCTAGTTGAACGAAAGCCTGAGAATGAT
ATCGTTGATTACTTCAATTACGAGTTATCGCCATATCCAATGTCCCTGTT
CAAAGATGGCATCATGCGAACATCACCGAAATCAGTTTTAAAACCATACC
TTAGAAGTGGGAATCCCGCTGTTAGCATTCCAGAAACAACTCGTATTGTT
GATGGTGGTGGTCTGCTGTGGTGTTGTGACTGGAAAAGAGATGAAACATT
CCTCGTCATTTTTCAAAGGTATGCAGTATTTCTCACAAATCACAACATCG
ATACAATAGTTTTTGACGGATACAGCTTGTCGACTAAAGATTCAACACAC
CAAAAGCGATCTGGGACTGCTTCTCAAGAAGTCGAAATCAAAGAGGCGAA
TCCTTGTCCAGCCAACAGAAAAACCTTTCTTGGGAACTACCATAACAAAG
AAAGATTTGTTGCATGCCTGGCAGGTTACCTAAGAGAGCGCAACTTCAAA
GTGGTCGAGTGTCCAAGCGATGCAGACACAACCATTGTCAAAGAGGCGTT
GAATGCTGCTAAGGATTCGTCTGTTGTTATCTACTCTGACGACACTGATA
TTCTTTGTTTGCTGTTGCATCACATCGCCAAAGATTCGTCACTGAAGGAG
ATTTTCATGGTCGATATGACTAAAAAGAAAGGCAAGCAAAGAGAATGCTA
CAACGTATCAGAAATTCTCCAAAGCAACACACGTATTGCCGATTTCATTT
TGTTTGCCCACGCATTCACTGGTTGTGATACGACATCGGCAATTCACAAT
TTCGGAAAGACGTCAATCTTCAACAAAATAGAAGAATCAACCGAAATTCA
GTCACTCGTCAGAGAATTCTACAAAGATAATTCTCCCGAGAAAATTGGTG
ATATCGCGATAAGGCTGTTTGAACTCTTGTACTCTTCAACGGATACATTG
CCAACTATACGGAAGAAGAAGTACGAGCAAATGGTTTTGTCAAATCGTGC
TGTCATCGACCCTTCAATGCTACCGCCATCACCTAGGGCAGCTTATTACC
ATGGCTTACGCGTGTATCACCAGTTGAAAGTATGGCGAGAGCTCAGAAAT
ACCGACAACATGCCACTTAACTGGGGGTGGCAGATGGTGGCTGAATCCTT
TACTCCAATCATGACAGATATCAAAGCTGGTCTCTCTGATCTATTGAAAG
TTATTCGTTGTGGCTGTAAAGGTATGTGTATGCTCAATCTTTTTGCTGCA
ACAGGACACAACAACTACGCTAAGTCCTGCAGATTGTATCTTCAATCTGT
CACTGAATTGGAAACTGCGCAACCGGAGGTGTACGATCAGATGTTGAAGG
GTAACCACACTGTCCGAAGAACCCTAAAGAATTGGGCTGGTCTTTGGACA
GATCTTTCGATTGAACAAATATTGATGAAGTCTTTGAAGGGTAGATCGGG
AGTCGTGGCTAAAGGAATTACCGAAAACGTTTTACAAGTCTGGACTAAAA
CGATGCACCGATGTGCGGAAATATCAGACGCCATGAACACAATCGTCTCA
ACCAAACCACAATCAACACCTAAACACAAAGAACTGTTTGTTGGTAGAAT
CAAGCGAGATTACGAAGATTTCCTCAAAATTAAGAGCTGGTTTGATGACC
GAAACCCATTTACCATCAGTAAAGATCTTATTTCACTGGACACAGGGCTG
GTAGACCTAGAAAACCGATTGACATGTGACAAAGCCGACACAATCGGGGC
TGCTATCCACAAAGAATTAGAAGATCAATCGTATTCTGGATGTACCATAA
AACGAAGTAAACAAATTACAAATTTGCAAAGCTTGTATTCCAACGTCAGC
ATCGAGAAAGAAAAAGTATCCGTCGACCCGCTGACTCTCTTCCTACGTCT
GATCGTCCTAGTTGAACGAAAGCCTGAGAATGATATCGTTGATTACTTCA
ATTACGAGTTATCGCCATATCCAATGTCCCTGTTCAAAGATGGCATCATG
CGAACATCACCGAAATCAGTTTTAAAACCATACCTTAGAAGTGGGAATCC
CGCTGTTAGCATTCCAGAAACAACTCGTATTGTTGATGGTGGTGGTCTGC
TGTGGTGTTGTGACTGGAAAAGAGATGAAACATTCCTCGTCATTTTTCAA
AGGTATGCAGTATTTCTCACAAATCACAACATCGATACAATAGTTTTTGA
CGGATACAGCTTGTCGACTAAAGATTCAACACACCAAAAGCGATCTGGGA
CTGCTTCTCAAGAAGTCGAAATCAAAGAGGCGAATCCTTGTCCAGCCAAC
AGAAAAACCTTTCTTGGGAACTACCATAACAAAGAAAGATTTGTTGCATG
CCTGGCAGGTTACCTAAGAGAGCGCAACTTCAAAGTGGTCGAGTGTCCAA
GCGATGCAGACACAACCATTGTCAAAGAGGCGTTGAATGCTGCTAAGGAT
TCGTCTGTTGTTATCTACTCTGACGACACTGATATTCTTTGTTTGCTGTT
GCATCACATCGCCAAAGATTCGTCACTGAAGGAGATTTTCATGGTCGATA
TGACTAAAAAGAAAGGCAAGCAAAGAGAATGCTACAACGTATCAGAAATT
CTCCAAAGCAACACACGTATTGCCGATTTCATTTTGTTTGCCCACGCATT
CACTGGTTGTGATACGACATCGGCAATTCACAATTTCGGAAAGACGTCAA
TCTTCAACAAAATAGAAGAATCAACCGAAATTCAGTCACTCGTCAGAGAA
TTCTACAAAGATAATTCTCCCGAGAAAATTGGTGATATCGCGATAAGGCT
GTTTGAACTCTTGTACTCTTCAACGGATACATTGCCAACTATACGGAAGA
AGAAGTACGAGCAAATGGTTTTGTCAAATCGTGCTGTCATCGACCCTTCA
ATGCTACCGCCATCACCTAGGGCAGCTTATTACCATGGCTTACGCGTGTA
TCACCAGTTGAAAGTATGGCGAGAGCTCAGAAATACCGACAACATGCCAC
TTAACTGGGGGTGGCAGATGGTGGCTGAATCCTTTACTCCAATCATGACA
GATATCAAAGCTGGTCTCTCTGATCTATTGAAAGTTATTCGTTGTGGCTG
TAAAGGTATGTGTATGCTCAATCTTTTTGCTGCAACAGGACACAACAACT
ACGCTAAGTCCTGCAGATTGTATCTTCAATCTGTCACTGAATTGGAAACT
GCGCAACCGGAGGTGTACGATCAGATGTTGAAGGGTAACCACACTGTCCG
AAGAACCCTAAAGAATTGGGCTGGTCTTTGGACAGATCTTTCGATTGAAC
AAATATTGATGAAGTCTTTGAAGGGTAGATCGGGAGTCGTGGCTAAAGGA
ATTACCGAAAACGTTTTACAAGTCTGGACTAAAACGATGCACCGATGTGC
GGAAATATCAGACGCCATGAACACAATCGTCTCAACCAAACCACAATCAA
CACCTAAACACAAAGAACTGTTTGTTGGTAGAATCAAGCGAGATTACGAA
GATTTCCTCAAAATTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014064XLOC_014064Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025018-proteinTCONS_00025018-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025018-exon-sc0000515-1575043694:55354..56449TCONS_00025018-exon-sc0000515-1575043694:55354..56449Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1575043694:54059..55225TCONS_00025018-exon-sc0000515-1575043694:54059..55225Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1575043694:52379..53858TCONS_00025018-exon-sc0000515-1575043694:52379..53858Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1510915933:55354..56449TCONS_00025018-exon-sc0000515-1510915933:55354..56449Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1510915933:54059..55225TCONS_00025018-exon-sc0000515-1510915933:54059..55225Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1510915933:52379..53858TCONS_00025018-exon-sc0000515-1510915933:52379..53858Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1491911889:55354..56449TCONS_00025018-exon-sc0000515-1491911889:55354..56449Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1491911889:54059..55225TCONS_00025018-exon-sc0000515-1491911889:54059..55225Clytia hemisphaericaexon
TCONS_00025018-exon-sc0000515-1491911889:52379..53858TCONS_00025018-exon-sc0000515-1491911889:52379..53858Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000515supercontigsc0000515:52379..56449 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.111793 0.101075 0.0605654 0 0.248089 0.274692 0 9.21483e-08 0.129735 0.384962 0.271142 0.179143 0.000350825 0.046968 0.373473 0.334739 0.167066 0.158608 0.0533583 0.106571 0.030101 0.0284062 0 0.0984486 0 0.0439753 0.0137654 0.0146908 0 0.0454097
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN_domain-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025018 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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