TCONS_00024915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024915
Unique NameTCONS_00024915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4639

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024915 ID=TCONS_00024915|Name=TCONS_00024915|organism=Clytia hemisphaerica|type=transcript|length=4639bp
AAATAAACACGACGATACCCTGACCGAACACGACAATACCCTGTACAAAC
ACGACACTGCATTGAACAAACACGACTATACCCTGACCGAACACGACTAT
ACCCTGACCGAACACGAGAACACTTTGGATAAACAGCAAAGTTCCATCGA
CGATCACGGCGATGTCCTGGACCATCACTCAAACATTTTGACCGATCATA
ACGATTTCCTGCAGGAAAATAAAGAATGTATTTTAAGACTTGACCAAGTA
GTTGAGTGTTTGAAAGAGGAACATGAGTTCATAAAGAAGACTTTACCCAC
TTATAAAGaaCCTGGTACTTTCTGTAACTCTGAAGCTCTGGAAATTATTT
CCAACAATATTGGCCAACAGAAAGATCAATTACTCACAAGACTTGGTTTA
TCTCTAAATGACGATCAAAAAAAGTTAACAGAACAACTCAAAACAGTCGA
ATGGGCACGGTTATCATCGGAGTTGGAAAGATTGGAACGAGTGGATTTGG
TCAGCGATATCAAGAAAAAAACACCAGTTACTGAAGATATCCAATTAGCA
TCATCAAAATTACGATGTCAATACGCTAAAGAAAAGATCACTTCACTCGC
TCATGAGCCCTTGATGGGAGACCAAAATGAAGTCCATTACCAATACGACG
AAGATCTATACACCGATCTAGCAGTCCTCAAAGCAACCGAGGTTGAAAAG
GAGATCAATAATTCTGATCGTGAGGTATTAATGGAGCAGAAGCTGTTACA
GAAAGAAAGCATAGAGCTCCATGACTTGTTCCAGAAGGAGGATGAAGCAG
TTTTTGTTCGTGCTGTGGGCGGTATGGGAAAAACAACCATGCTTGAAATG
TACACTCGAAAGTGGGCCAGGCATCAACTGGGCTTAGATTTCCCATTGGA
ATTTGTCTTCTTCTTTTCCTGCCGGGAGATCAATCAAATGTATGGCAAGG
TCAAATCGATCGAGGACCTTTTCAAAGACAAATACCCTGACATTTTTGAT
AAAACTACTTTAAAAGATCTCGAACCAGTTGCAGATAAGATTTTACTGGT
TGTTGACGGACTTGATGAGCTACAAGACGTTTACGATTGCTCCCaaaaga
aagtaaacaaaaacggAACGCTAACTCCTTTTCAAATCGTCTTCGATCTC
ATCAACACACAAGGTCGTATCTTGAAAGGTCACAAAAGCATTGCATGTGG
AAGACCAAAAGCGTGTGACTTTTTAAAGAGAAAGATAATGGATCTGAAAA
CTTCCAATAGAACggtgatcaaaatcaaaacagtcGAAGTTTGCGGTTTT
AAGGAGGAGGACGTCGGAAAATACATCGATAAATTCTTCAACGGGAACAT
TGAGAAAATCAATCGAGTGAAAGAAATCATCAGCGTATCCCACAATTTGA
AAGTCATGTCCANTAGTTTGCGGATTTAAGGAGGAGGACGTCGGAAAATA
CATCGATAAATTCTTCAACGGGAACATTGAGAAAATCAATCGGGTGAAAG
AAATCATCAGCGTATCCCACAACTTGAAAGTCATGTCCACCGTTCCCGTG
TTTGCTTGGGTCATCTGTAACGTATACAGCGAGGATCTCATAACGAAACC
CTTAAACACTTGTACAGAACTTTACATGTATGCTTGTTTTGTCTTTTTGA
GAAAACATTTACAAGGTGTTTCCACTCAAGGTTATGATAACTTGCTTGAT
ATGCTAAACGATAATAATGTTATTGATTGCATTTATTCACTCATGACTTT
ATCGGTGAAAACGTACATGCAAAACCAGGTGCTATTTTCTGAAGAAGAGG
TTCGTCAATTGAACTGTCCCGTACATCTTGAGCAAACGGGTCTTATCGTC
AATTACAATCGTGGCGAAATGAGAGAACCGATTTACCAATACAAGCACCT
AGTTCTTCAGGAATTCCTGACAGGACTTTATTTGTGCGTTACGAAAGGGA
TGTCCCCGTATTTAACAAACCGCGAACTTTCAAGTTGTGCACCAGTTATA
TTTGGCATTGGACGTCTTCTGAAAGAGAATGACTTCTTCATTAAATTCTT
CCAACGACTCTCTAATTTACATACAACAAAGTCGACCTTTTTCAGAAGAA
TATTCCAGCCCTATAGAACATGGGTATTCAATAAGTATCTCACCAGGAAC
ACCCTTGAAATCCCTGATTGTATGGTCGGTCCAAACAGCTTGCTGATTGA
TTCAACAATCCCAGAATGCCAAGAGTTTATGACATCACTCTATGAAGGAC
GATTGAAGATAGAATGTCCTTTTTCTACAGTTACGATCGAAAGTGATCTC
AACGAAATTGATGTGAGGAACGCCATTTTTCTCATAGATCATTTGAACCT
GAAATTGAAAGTACCTGAACGGATGTTGGGTACGAACCATCTCATTATCG
ACACTACGCTTAAAGAATGTGAGCAATGGACCAAAGTTTTAATGAAGTCA
AATTCAATAATAGTGGATTGCCCTTTTACCAGAACTTATATTCATTGTGA
AACAGCTGACATAGAATCAGTCCTATTTCTTGTTCAACGTTTAAATCTGA
CATTGAAATTACCAAATTTAATGAGTGATCATGATACTTTGATCATTTAT
GGATTAGATGTCGAATGTGCTCGATTCATGGAAATTGTCTATAGAACGGA
GGCTAAAGTTGAATGCCCATTTTCTGAAGTGGAAATATATGAAATGGCTG
ATGAAAGTCAATTGGTTGATCAGATATCGTTTTTTATTGAACATTTGCAT
TTAATATTAAAAGTTCCTAATTGTATGATTGGCTCTGACACTATAATCAT
CAACACTGATTTTCCAGAATGCAAAGCTTATATAAAGGCTATTTTTGAGC
TGAAATTACAACCTGTTTATCAAGCAGCATCGTCAATTGAAATTCACTGT
GATGTGAGCTATGAATATGTTGGATTAGTAACATATATCATCAAATCCtc
caatctagagctcaaaatCCCGAATTGTATGCTCGGTTTTAAATCGTTAA
TTATCGACAGCAATGTGGATTCCTGCAGAAGTTTTGTAGACTTTATTgcc
aaatcaaaatgtccagttGAATGCTCGTATTCAACAGCAGAGGTTAAAGC
CCTTATCAAGGGCGGTAAACCATTAGATGTGATTAACTTTCTTGAAGCTA
TGAACCTTAAACTCAAAATACCGATCCCAATGCTTGGTAACAAGTCACTA
ATTGTAGACTCCAATGTGGGCTTTTACAGAGATTTCAATGATAAAGAATG
TCATCCTTTTTCAACAGCAGAAAATTATATCCGTTATTGGGACTACTATT
TATCAGAAGTGGCCACTTTTCTTGAAAGTATGGACCTCAAACTCAAACTC
AAAATCCCGAGTTGTATGAAAGATCAACGTACACTGATTATTGATGCAGA
GATTCcagaatttaaattaatttctaACGTAAAGCTAAGAGAAAGGCTTA
CAGGCCCAAAAACacaatttgaaaaagttgagaTAAAGTCTGATTTACAG
CCTGATGATTTAGATACCGTTATTTTCTTGCTTGAACAAAACAGTGTAAA
AGTTATTAAACTACCTCATTGCATGATTGGGGCTACTTCGTTAATCATCA
ACAGTCACCTAAAAGAATGCAGAgggtttttgaaacttttcaccGCCATG
AATTTATGGTTTGACAACTTACCGTTCGATGTGGTCGAGATTCGCAGTGA
CTTAAGTGGTGAAGATATGTTACGTGTAGAGTCATTATTTACGCATATCA
AAACAGTCTCTCAGTCTGAAAGAGTCGAGTTAAAGCTGAAAATACCGTCT
CAAATGCTCGGTCCTCGTTCATTCATTATCGATATTGACAAACGGCAATG
CAGACGGTTTTTATGGTTCTTCCATCAGTCAAAAACAAAACCGATGTGCC
GATGTGATTTACCTTTCAACGGAGTTGAGATTCAAAGCGAGCCATTGGAT
TCAATATCGTCGTTTCTTCCTGAAAGGCGGAAAGAACTCATCGATCAAAT
CAAATTATTTATAACGCGTTTCGCTTTAAAGTTGCGGATCCCTGACTGTA
TGTTAGGAACCAAAGGTTTGGTTATTGACAGGAGCAACCGAGAATGTACG
AACTTTATTAGACATGTCAATTCGTTACAATTAAAAGTGAACTGTCCGTT
CTCTACAGTTGAGCAAATTTATGGTAAGAATGATGACCTCAACATGCAAC
AAGTACAATCATTTACTGATCGTTCAAATTTGGAACTTGATTTATAAATC
GCTCTCAGAGTAAGTGATGGAAAGGGACCAAATGACTGAGAGTTTGGAAG
CAAATTAACGAAACTAAAATTTTGACACATGGAAAAGGTTTAAACGTATG
ATAGGTACTTCAAAGTACGTTTTTGTATAAATCTTCCTGTTTTTGGCTAA
AAAATTCATTACTCGTTAAGGTTTTGCTAAAAAATACACCGAAGTAGTGA
TCTGAGcagcttttttgttttccttgcACCCCTGTGCACCCACACCGAAA
AACCCCACGCTTCTCTGCACTCTTCACTGAAAAAGGTTTACAATTCAAGt
atttttcttaataaatattacttagtattttttatattacaatatttttt
ttaaaccgttggaaagataatttgatAGTTTAGGTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00024915-protein

>TCONS_00024915-protein ID=TCONS_00024915-protein|Name=TCONS_00024915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=904bp
MSTVPVFAWVICNVYSEDLITKPLNTCTELYMYACFVFLRKHLQGVSTQG
YDNLLDMLNDNNVIDCIYSLMTLSVKTYMQNQVLFSEEEVRQLNCPVHLE
QTGLIVNYNRGEMREPIYQYKHLVLQEFLTGLYLCVTKGMSPYLTNRELS
SCAPVIFGIGRLLKENDFFIKFFQRLSNLHTTKSTFFRRIFQPYRTWVFN
KYLTRNTLEIPDCMVGPNSLLIDSTIPECQEFMTSLYEGRLKIECPFSTV
TIESDLNEIDVRNAIFLIDHLNLKLKVPERMLGTNHLIIDTTLKECEQWT
KVLMKSNSIIVDCPFTRTYIHCETADIESVLFLVQRLNLTLKLPNLMSDH
DTLIIYGLDVECARFMEIVYRTEAKVECPFSEVEIYEMADESQLVDQISF
FIEHLHLILKVPNCMIGSDTIIINTDFPECKAYIKAIFELKLQPVYQAAS
SIEIHCDVSYEYVGLVTYIIKSSNLELKIPNCMLGFKSLIIDSNVDSCRS
FVDFIAKSKCPVECSYSTAEVKALIKGGKPLDVINFLEAMNLKLKIPIPM
LGNKSLIVDSNVGFYRDFNDKECHPFSTAENYIRYWDYYLSEVATFLESM
DLKLKLKIPSCMKDQRTLIIDAEIPEFKLISNVKLRERLTGPKTQFEKVE
IKSDLQPDDLDTVIFLLEQNSVKVIKLPHCMIGATSLIINSHLKECRGFL
KLFTAMNLWFDNLPFDVVEIRSDLSGEDMLRVESLFTHIKTVSQSERVEL
KLKIPSQMLGPRSFIIDIDKRQCRRFLWFFHQSKTKPMCRCDLPFNGVEI
QSEPLDSISSFLPERRKELIDQIKLFITRFALKLRIPDCMLGTKGLVIDR
SNRECTNFIRHVNSLQLKVNCPFSTVEQIYGKNDDLNMQQVQSFTDRSNL
ELDL
Run BLAST on NCBI

transcript from alignment at sc0000513:41180..47033+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024915 ID=TCONS_00024915|Name=TCONS_00024915|organism=Clytia hemisphaerica|type=transcript|length=5854bp|location=Sequence derived from alignment at sc0000513:41180..47033+ (Clytia hemisphaerica)
AAATAAACACGACGATACCCTGACCGAACACGACAATACCCTGTACAAAC ACGACACTGCATTGAACAAACACGACTATACCCTGACCGAACACGACTAT ACCCTGACCGAACACGAGAACACTTTGGATAAACAGCAAAGTTCCATCGA CGATCACGGCGATGTCCTGGACCATCACTCAAACATTTTGACCGATCATA ACGATTTCCTGCAGGAAAATAAAGAATGTATTTTAAGACTTGACCAAGTA GTTGAGTGTTTGAAAGAGGAACATGAGTTCATAAAGAAGACTTTACCCAC TTATAAAGGTATAATTTCTTTTCTTAGCAGCAATTTGAACAGATGTTTTG TGAACAGGCCATTCAGTCGGAATAAGACTTACGAAAAACCTTTCTGCAAA ATTGACGCCAATACGGTAAATTATTacaaaagaagaaacaaaaatgatCA AGGCTGGCAAGAATTGACTAGGACTACTAGGAGGGGTGAGAGAATTCTTC TGGAATAACAATCTTAGCAAAATACAAATGCTTGAGCTGTgaagaatttt ttattcaaaagaaagTGCATccaatttattttttagaaCCTGGTACTTTC TGTAACTCTGAAGCTCTGGAAATTATTTCCAACAATATTGGCCAACAGAA AGATCAATTACTCACAAGACTTGGTTTATCTCTAAATGACGATCAAAAAA AGTTAACAGAACAACTCAAAACAGTCGAATGGGCACGGTTATCATCGGAG TTGGAAAGATTGGAACGAGTGGATTTGGTCAGCGATATCAAGAAAAAAAC ACCAGTTACTGAAGGTAAGCACGAGGTtgtttcgttcgttcgttcattca TTCGTTTGTCTGTCACCATCTTTTCTTgggattggctcgttagttttttt gttttttttgcatagtgatgcaaaatgacagtgcccaaaaagtgacggag cccgttcttcgagaattttttgggcaaatttgggtcaaaaaagGCCTGAA AAGGGGTTTTTTATGAGATTTGTGAGAAATTGCTTGTAggtttttttctg attatttgcTTTAAAGACAGAGAATAAGAATCTTTAAAAAGTAACTGAAT CTGTTGCTCTCGTAAAATATTTGTTCGACTTAAGATACGGATTTTCGGTT TTCGAggaaattcaattttatttttattaaattttaatggtttggggggg ggggggttttttcgGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttgggggggggggtgttta ttcgagggagggtgtttattcgagggagggtgtttaaaagaagggggcgt ttattgaatAATCTTTAACCAAGGTCACTTTAATAAAGTGAACGTGAACC CTGTTTTGCCGTTCcgttttctttcatttcaaaatgtcattttaGAGAGG TGAAAATGAGTCAAAATGAGTTTGAGTTCTTAAAGAATACAATTATTTTA ACACGTGTTTAAGTTTTCCTTCATATAATTTTCCCTCGCAGCTAATTGTT TCagataaacgcccctcctagagTTTATTGGAAGAAGCGTTTAATTAAGG GATgcgtttattgaaaatttttcctttagggaggggcgtttatttcaAGT AATACGGTATTCAGCATATAGCTTGTTTGACTGACTTATGGCCTTGAAAG TGTGTAGCAAAGtctttgacattgaaattgtttttacaaTCATCTTTTTA GATATCCAATTAGCATCATCAAAATTACGATGTCAATACGCTAAAGAAAA GATCACTTCACTCGCTCATGAGCCCTTGATGGGAGACCAAAATGAAGTCC ATTACCAATACGACGAAGATCTATACACCGATCTAGCAGTCCTCAAAGCA ACCGAGGTTGAAAAGGAGATCAATAATTCTGATCGTGAGGTATTAATGGA GCAGAAGCTGTTACAGAAAGAAAGCATAGAGCTCCATGACTTGTTCCAGA AGGAGGATGAAGCAGTTTTTGTTCGTGCTGTGGGCGGTATGGGAAAAACA ACCATGCTTGAAATGTACACTCGAAAGTGGGCCAGGCATCAACTGGGCTT AGATTTCCCATTGGAATTTGTCTTCTTCTTTTCCTGCCGGGAGATCAATC AAATGTATGGCAAGGTCAAATCGATCGAGGACCTTTTCAAAGACAAATAC CCTGACATTTTTGATAAAACTACTTTAAAAGATCTCGAACCAGTTGCAGA TAAGATTTTACTGGTTGTTGACGGACTTGATGAGCTACAAGACGTTTACG ATTGCTCCCaaaagaaagtaaacaaaaacggAACGCTAACTCCTTTTCAA ATCGTCTTCGATCTCATCAACACACAAGGTCGTATCTTGAAAGGTCACAA AAGCATTGCATGTGGAAGACCAAAAGCGTGTGACTTTTTAAAGAGAAAGA TAATGGATCTGAAAACTTCCAATAGAACggtgatcaaaatcaaaacagtc GAAGTTTGCGGTTTTAAGGAGGAGGACGTCGGAAAATACATCGATAAATT CTTCAACGGGAACATTGAGAAAATCAATCGAGTGAAAGAAATCATCAGCG TATCCCACAATTTGAAAGTCATGTCCANTAGTTTGCGGATTTAAGGAGGA GGACGTCGGAAAATACATCGATAAATTCTTCAACGGGAACATTGAGAAAA TCAATCGGGTGAAAGAAATCATCAGCGTATCCCACAACTTGAAAGTCATG TCCACCGTTCCCGTGTTTGCTTGGGTCATCTGTAACGTATACAGCGAGGA TCTCATAACGAAACCCTTAAACACTTGTACAGAACTTTACATGTATGCTT GTTTTGTCTTTTTGAGAAAACATTTACAAGGTGTTTCCACTCAAGGTTAT GATAACTTGCTTGATATGCTAAACGATAATAATGTTATTGATTGCATTTA TTCACTCATGACTTTATCGGTGAAAACGTACATGCAAAACCAGGTGCTAT TTTCTGAAGAAGAGGTTCGTCAATTGAACTGTCCCGTACATCTTGAGCAA ACGGGTCTTATCGTCAATTACAATCGTGGCGAAATGAGAGAACCGATTTA CCAATACAAGCACCTAGTTCTTCAGGAATTCCTGACAGGACTTTATTTGT GCGTTACGAAAGGGATGTCCCCGTATTTAACAAACCGCGAACTTTCAAGT TGTGCACCAGTTATATTTGGCATTGGACGTCTTCTGAAAGAGAATGACTT CTTCATTAAATTCTTCCAACGACTCTCTAATTTACATACAACAAAGTCGA CCTTTTTCAGAAGAATATTCCAGCCCTATAGAACATGGGTATTCAATAAG TATCTCACCAGGAACACCCTTGAAATCCCTGATTGTATGGTCGGTCCAAA CAGCTTGCTGATTGATTCAACAATCCCAGAATGCCAAGAGTTTATGACAT CACTCTATGAAGGACGATTGAAGATAGAATGTCCTTTTTCTACAGTTACG ATCGAAAGTGATCTCAACGAAATTGATGTGAGGAACGCCATTTTTCTCAT AGATCATTTGAACCTGAAATTGAAAGTACCTGAACGGATGTTGGGTACGA ACCATCTCATTATCGACACTACGCTTAAAGAATGTGAGCAATGGACCAAA GTTTTAATGAAGTCAAATTCAATAATAGTGGATTGCCCTTTTACCAGAAC TTATATTCATTGTGAAACAGCTGACATAGAATCAGTCCTATTTCTTGTTC AACGTTTAAATCTGACATTGAAATTACCAAATTTAATGAGTGATCATGAT ACTTTGATCATTTATGGATTAGATGTCGAATGTGCTCGATTCATGGAAAT TGTCTATAGAACGGAGGCTAAAGTTGAATGCCCATTTTCTGAAGTGGAAA TATATGAAATGGCTGATGAAAGTCAATTGGTTGATCAGATATCGTTTTTT ATTGAACATTTGCATTTAATATTAAAAGTTCCTAATTGTATGATTGGCTC TGACACTATAATCATCAACACTGATTTTCCAGAATGCAAAGCTTATATAA AGGCTATTTTTGAGCTGAAATTACAACCTGTTTATCAAGCAGCATCGTCA ATTGAAATTCACTGTGATGTGAGCTATGAATATGTTGGATTAGTAACATA TATCATCAAATCCtccaatctagagctcaaaatCCCGAATTGTATGCTCG GTTTTAAATCGTTAATTATCGACAGCAATGTGGATTCCTGCAGAAGTTTT GTAGACTTTATTgccaaatcaaaatgtccagttGAATGCTCGTATTCAAC AGCAGAGGTTAAAGCCCTTATCAAGGGCGGTAAACCATTAGATGTGATTA ACTTTCTTGAAGCTATGAACCTTAAACTCAAAATACCGATCCCAATGCTT GGTAACAAGTCACTAATTGTAGACTCCAATGTGGGCTTTTACAGAGATTT CAATGATAAAGAATGTCATCCTTTTTCAACAGCAGAAAATTATATCCGTT ATTGGGACTACTATTTATCAGAAGTGGCCACTTTTCTTGAAAGTATGGAC CTCAAACTCAAACTCAAAATCCCGAGTTGTATGAAAGATCAACGTACACT GATTATTGATGCAGAGATTCcagaatttaaattaatttctaACGTAAAGC TAAGAGAAAGGCTTACAGGCCCAAAAACacaatttgaaaaagttgagaTA AAGTCTGATTTACAGCCTGATGATTTAGATACCGTTATTTTCTTGCTTGA ACAAAACAGTGTAAAAGTTATTAAACTACCTCATTGCATGATTGGGGCTA CTTCGTTAATCATCAACAGTCACCTAAAAGAATGCAGAgggtttttgaaa cttttcaccGCCATGAATTTATGGTTTGACAACTTACCGTTCGATGTGGT CGAGATTCGCAGTGACTTAAGTGGTGAAGATATGTTACGTGTAGAGTCAT TATTTACGCATATCAAAACAGTCTCTCAGTCTGAAAGAGTCGAGTTAAAG CTGAAAATACCGTCTCAAATGCTCGGTCCTCGTTCATTCATTATCGATAT TGACAAACGGCAATGCAGACGGTTTTTATGGTTCTTCCATCAGTCAAAAA CAAAACCGATGTGCCGATGTGATTTACCTTTCAACGGAGTTGAGATTCAA AGCGAGCCATTGGATTCAATATCGTCGTTTCTTCCTGAAAGGCGGAAAGA ACTCATCGATCAAATCAAATTATTTATAACGCGTTTCGCTTTAAAGTTGC GGATCCCTGACTGTATGTTAGGAACCAAAGGTTTGGTTATTGACAGGAGC AACCGAGAATGTACGAACTTTATTAGACATGTCAATTCGTTACAATTAAA AGTGAACTGTCCGTTCTCTACAGTTGAGCAAATTTATGGTAAGAATGATG ACCTCAACATGCAACAAGTACAATCATTTACTGATCGTTCAAATTTGGAA CTTGATTTATAAATCGCTCTCAGAGTAAGTGATGGAAAGGGACCAAATGA CTGAGAGTTTGGAAGCAAATTAACGAAACTAAAATTTTGACACATGGAAA AGGTTTAAACGTATGATAGGTACTTCAAAGTACGTTTTTGTATAAATCTT CCTGTTTTTGGCTAAAAAATTCATTACTCGTTAAGGTTTTGCTAAAAAAT ACACCGAAGTAGTGATCTGAGcagcttttttgttttccttgcACCCCTGT GCACCCACACCGAAAAACCCCACGCTTCTCTGCACTCTTCACTGAAAAAG GTTTACAATTCAAGtatttttcttaataaatattacttagtattttttat attacaatattttttttaaaccgttggaaagataatttgatAGTTTAGGT TTTT

Coding sequence (CDS) from alignment at sc0000513:41180..47033+

>TCONS_00024915 ID=TCONS_00024915|Name=TCONS_00024915|organism=Clytia hemisphaerica|type=CDS|length=2715bp|location=Sequence derived from alignment at sc0000513:41180..47033+ (Clytia hemisphaerica)
ATGTCCACCGTTCCCGTGTTTGCTTGGGTCATCTGTAACGTATACAGCGA
GGATCTCATAACGAAACCCTTAAACACTTGTACAGAACTTTACATGTATG
CTTGTTTTGTCTTTTTGAGAAAACATTTACAAGGTGTTTCCACTCAAGGT
TATGATAACTTGCTTGATATGCTAAACGATAATAATGTTATTGATTGCAT
TTATTCACTCATGACTTTATCGGTGAAAACGTACATGCAAAACCAGGTGC
TATTTTCTGAAGAAGAGGTTCGTCAATTGAACTGTCCCGTACATCTTGAG
CAAACGGGTCTTATCGTCAATTACAATCGTGGCGAAATGAGAGAACCGAT
TTACCAATACAAGCACCTAGTTCTTCAGGAATTCCTGACAGGACTTTATT
TGTGCGTTACGAAAGGGATGTCCCCGTATTTAACAAACCGCGAACTTTCA
AGTTGTGCACCAGTTATATTTGGCATTGGACGTCTTCTGAAAGAGAATGA
CTTCTTCATTAAATTCTTCCAACGACTCTCTAATTTACATACAACAAAGT
CGACCTTTTTCAGAAGAATATTCCAGCCCTATAGAACATGGGTATTCAAT
AAGTATCTCACCAGGAACACCCTTGAAATCCCTGATTGTATGGTCGGTCC
AAACAGCTTGCTGATTGATTCAACAATCCCAGAATGCCAAGAGTTTATGA
CATCACTCTATGAAGGACGATTGAAGATAGAATGTCCTTTTTCTACAGTT
ACGATCGAAAGTGATCTCAACGAAATTGATGTGAGGAACGCCATTTTTCT
CATAGATCATTTGAACCTGAAATTGAAAGTACCTGAACGGATGTTGGGTA
CGAACCATCTCATTATCGACACTACGCTTAAAGAATGTGAGCAATGGACC
AAAGTTTTAATGAAGTCAAATTCAATAATAGTGGATTGCCCTTTTACCAG
AACTTATATTCATTGTGAAACAGCTGACATAGAATCAGTCCTATTTCTTG
TTCAACGTTTAAATCTGACATTGAAATTACCAAATTTAATGAGTGATCAT
GATACTTTGATCATTTATGGATTAGATGTCGAATGTGCTCGATTCATGGA
AATTGTCTATAGAACGGAGGCTAAAGTTGAATGCCCATTTTCTGAAGTGG
AAATATATGAAATGGCTGATGAAAGTCAATTGGTTGATCAGATATCGTTT
TTTATTGAACATTTGCATTTAATATTAAAAGTTCCTAATTGTATGATTGG
CTCTGACACTATAATCATCAACACTGATTTTCCAGAATGCAAAGCTTATA
TAAAGGCTATTTTTGAGCTGAAATTACAACCTGTTTATCAAGCAGCATCG
TCAATTGAAATTCACTGTGATGTGAGCTATGAATATGTTGGATTAGTAAC
ATATATCATCAAATCCtccaatctagagctcaaaatCCCGAATTGTATGC
TCGGTTTTAAATCGTTAATTATCGACAGCAATGTGGATTCCTGCAGAAGT
TTTGTAGACTTTATTgccaaatcaaaatgtccagttGAATGCTCGTATTC
AACAGCAGAGGTTAAAGCCCTTATCAAGGGCGGTAAACCATTAGATGTGA
TTAACTTTCTTGAAGCTATGAACCTTAAACTCAAAATACCGATCCCAATG
CTTGGTAACAAGTCACTAATTGTAGACTCCAATGTGGGCTTTTACAGAGA
TTTCAATGATAAAGAATGTCATCCTTTTTCAACAGCAGAAAATTATATCC
GTTATTGGGACTACTATTTATCAGAAGTGGCCACTTTTCTTGAAAGTATG
GACCTCAAACTCAAACTCAAAATCCCGAGTTGTATGAAAGATCAACGTAC
ACTGATTATTGATGCAGAGATTCcagaatttaaattaatttctaACGTAA
AGCTAAGAGAAAGGCTTACAGGCCCAAAAACacaatttgaaaaagttgag
aTAAAGTCTGATTTACAGCCTGATGATTTAGATACCGTTATTTTCTTGCT
TGAACAAAACAGTGTAAAAGTTATTAAACTACCTCATTGCATGATTGGGG
CTACTTCGTTAATCATCAACAGTCACCTAAAAGAATGCAGAgggtttttg
aaacttttcaccGCCATGAATTTATGGTTTGACAACTTACCGTTCGATGT
GGTCGAGATTCGCAGTGACTTAAGTGGTGAAGATATGTTACGTGTAGAGT
CATTATTTACGCATATCAAAACAGTCTCTCAGTCTGAAAGAGTCGAGTTA
AAGCTGAAAATACCGTCTCAAATGCTCGGTCCTCGTTCATTCATTATCGA
TATTGACAAACGGCAATGCAGACGGTTTTTATGGTTCTTCCATCAGTCAA
AAACAAAACCGATGTGCCGATGTGATTTACCTTTCAACGGAGTTGAGATT
CAAAGCGAGCCATTGGATTCAATATCGTCGTTTCTTCCTGAAAGGCGGAA
AGAACTCATCGATCAAATCAAATTATTTATAACGCGTTTCGCTTTAAAGT
TGCGGATCCCTGACTGTATGTTAGGAACCAAAGGTTTGGTTATTGACAGG
AGCAACCGAGAATGTACGAACTTTATTAGACATGTCAATTCGTTACAATT
AAAAGTGAACTGTCCGTTCTCTACAGTTGAGCAAATTTATGGTAAGAATG
ATGACCTCAACATGCAACAAGTACAATCATTTACTGATCGTTCAAATTTG
GAACTTGATTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014004XLOC_014004Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024915-exon-sc0000513-1491911889:41180..41487TCONS_00024915-exon-sc0000513-1491911889:41180..41487Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1510915933:41180..41487TCONS_00024915-exon-sc0000513-1510915933:41180..41487Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1575043694:41180..41487TCONS_00024915-exon-sc0000513-1575043694:41180..41487Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1491911889:41766..41993TCONS_00024915-exon-sc0000513-1491911889:41766..41993Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1510915933:41766..41993TCONS_00024915-exon-sc0000513-1510915933:41766..41993Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1575043694:41766..41993TCONS_00024915-exon-sc0000513-1575043694:41766..41993Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1491911889:42931..47033TCONS_00024915-exon-sc0000513-1491911889:42931..47033Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1510915933:42931..47033TCONS_00024915-exon-sc0000513-1510915933:42931..47033Clytia hemisphaericaexon
TCONS_00024915-exon-sc0000513-1575043694:42931..47033TCONS_00024915-exon-sc0000513-1575043694:42931..47033Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024915-proteinTCONS_00024915-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000513supercontigsc0000513:41180..47033 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21623 0.242097 0.290165 0.461307 1.01519 0.80222 1.25614 1.29165 0.913576 2.33223 3.12378 0.698705 8.04637 5.67597 4.12641 8.23284 1.92334 2.87153 9.19429 11.4365 1.20792 1.20103 1.15283 1.89144 5.09885 6.2542 11.5303 10.1597 3.94664 3.10632
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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