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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024836 ID=TCONS_00024836|Name=TCONS_00024836|organism=Clytia hemisphaerica|type=transcript|length=1347bp
GCATCATATGGCGGGTTAAAACTGCACGCCCGCTCCCACTCGTCCCAGTC
CTACGGACTCCGACTTGTAGCGTTTGAGTTCGGTCATTCAGTTCACTTCA
TCCTCTCATTCAGTCAACACAAATATTTTGCTTTCTTGGTTAATCAGAAA
TACATTGCTCTCATCTTCAACTTCCAACACGACGACGTCAACTGCATCTT
CAATTATCAATTCTGCGTTTCTCCTATCGAACCCCACACACCAACACTCA
AAAAGTATGTCCACCACCGTGTCCCACCGTTGTTCCAGTTACGACCTCAT
CCGACATCCTGTTGAGTCAGCATTATTACGATCCAAAATGGTATCTCTAA
CTGTGGTATTCCTTTTTCATCACAACGTCTGGACCTGAACGACTGTAAAA
TTTATATCTAACTCCACCCAAGATTATCCAGCAAATCCGCCTGGGTGAGc
ctgttgttttttattattttactgCCTGCACACTTCGGGAAGGCCCATTC
GTCGCCAGATTCGTTAATTTTCGATGGGGACATCAACTAATTGCCATAAA
GACATTGCGATTCCAGCATTTCTCTCCCCAATTCCAACTTGGCCTTGAGA
ATTACATGTCCCCTCCCCTTGATGATGGGGTGTCCTTTCTCCTGAACCTC
TATTAGGTCTCCGCCACACTTAGCCAACAAAATGTCCGATTATTACCAGA
TATTCTCGATTTTCTCATTTGTATACGTAGCATGGGGGCAAGGCACAGTA
TAAGACAAGGCATGTCATTTAGGAGAACGTACATTTGGACTGGTTTAGTT
AAAGTACCCCTCTTGTATTTGGTCCCCAAATCCTCCCCTCTCTGACAATG
GTGTGTCATACATCTCTTAAAATTCAATCAAGTCTCCCCCATCATACTGA
GCAGCCAACGAAATGCCTGATTATTATTAGATTTTTTGCCTTTCTCCTTC
TTGTACACGTCCAAAGCACATTATAACACTAGGCGTGTCATTCTAAAAGG
GCGTACATCGGGCTGGTTTTATTTGACTTTCGTCCTTGTAATATGGTCCT
CACATATCAACCCACTTAGTAGCTGTATCTCCATTTAGCggtttttgttt
atctttctGTTTGTCAACCTGAATTGTTCCCCTGCCGGAGGTTACTTAGA
ACTATCGTAGATCTCTCCTCTGACACTGTCAGTGTTTTCATACTTTTGGG
TGGGTTATCTCATGTGTAAGTCCAATTTCATGTTCCACCCTCATCTGAGT
TGCATCTAACCTAATGATTGGTCCTTATTTGGGTATTCCCGACAGGATTA
GCAAGTCAATGTCCTGCACTTTAAATAGGTTCCTCATTGTGCCTTCA Run BLAST on NCBI transcript from alignment at sc0000511:220109..221455- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024836 ID=TCONS_00024836|Name=TCONS_00024836|organism=Clytia hemisphaerica|type=transcript|length=1347bp|location=Sequence derived from alignment at sc0000511:220109..221455- (Clytia hemisphaerica)
GCATCATATGGCGGGTTAAAACTGCACGCCCGCTCCCACTCGTCCCAGTC
CTACGGACTCCGACTTGTAGCGTTTGAGTTCGGTCATTCAGTTCACTTCA
TCCTCTCATTCAGTCAACACAAATATTTTGCTTTCTTGGTTAATCAGAAA
TACATTGCTCTCATCTTCAACTTCCAACACGACGACGTCAACTGCATCTT
CAATTATCAATTCTGCGTTTCTCCTATCGAACCCCACACACCAACACTCA
AAAAGTATGTCCACCACCGTGTCCCACCGTTGTTCCAGTTACGACCTCAT
CCGACATCCTGTTGAGTCAGCATTATTACGATCCAAAATGGTATCTCTAA
CTGTGGTATTCCTTTTTCATCACAACGTCTGGACCTGAACGACTGTAAAA
TTTATATCTAACTCCACCCAAGATTATCCAGCAAATCCGCCTGGGTGAGC
CTGTTGTTTTTTATTATTTTACTGCCTGCACACTTCGGGAAGGCCCATTC
GTCGCCAGATTCGTTAATTTTCGATGGGGACATCAACTAATTGCCATAAA
GACATTGCGATTCCAGCATTTCTCTCCCCAATTCCAACTTGGCCTTGAGA
ATTACATGTCCCCTCCCCTTGATGATGGGGTGTCCTTTCTCCTGAACCTC
TATTAGGTCTCCGCCACACTTAGCCAACAAAATGTCCGATTATTACCAGA
TATTCTCGATTTTCTCATTTGTATACGTAGCATGGGGGCAAGGCACAGTA
TAAGACAAGGCATGTCATTTAGGAGAACGTACATTTGGACTGGTTTAGTT
AAAGTACCCCTCTTGTATTTGGTCCCCAAATCCTCCCCTCTCTGACAATG
GTGTGTCATACATCTCTTAAAATTCAATCAAGTCTCCCCCATCATACTGA
GCAGCCAACGAAATGCCTGATTATTATTAGATTTTTTGCCTTTCTCCTTC
TTGTACACGTCCAAAGCACATTATAACACTAGGCGTGTCATTCTAAAAGG
GCGTACATCGGGCTGGTTTTATTTGACTTTCGTCCTTGTAATATGGTCCT
CACATATCAACCCACTTAGTAGCTGTATCTCCATTTAGCGGTTTTTGTTT
ATCTTTCTGTTTGTCAACCTGAATTGTTCCCCTGCCGGAGGTTACTTAGA
ACTATCGTAGATCTCTCCTCTGACACTGTCAGTGTTTTCATACTTTTGGG
TGGGTTATCTCATGTGTAAGTCCAATTTCATGTTCCACCCTCATCTGAGT
TGCATCTAACCTAATGATTGGTCCTTATTTGGGTATTCCCGACAGGATTA
GCAAGTCAATGTCCTGCACTTTAAATAGGTTCCTCATTGTGCCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024836-exon-sc0000511-1575043694:220109..221455 | TCONS_00024836-exon-sc0000511-1575043694:220109..221455 | Clytia hemisphaerica | exon |
| TCONS_00024836-exon-sc0000511-1510915933:220109..221455 | TCONS_00024836-exon-sc0000511-1510915933:220109..221455 | Clytia hemisphaerica | exon |
| TCONS_00024836-exon-sc0000511-1491911889:220109..221455 | TCONS_00024836-exon-sc0000511-1491911889:220109..221455 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000511 | supercontig | sc0000511:220109..221455 - |
Blast
The following BLAST results are available for this feature:
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