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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024834 ID=TCONS_00024834|Name=TCONS_00024834|organism=Clytia hemisphaerica|type=transcript|length=1859bp
NNTCATTTCACAATTATACATTTGTCTCCCTTTCATTGCTTCCCCTTGTT
TATGTTTAGGGTATCTTATCACTATTTTCGGGTATTTCGACCATCATCAA
AAACGCATTTTTGGATTCCTCACTAGGCTAGGTTTATGATACTCTTCACT
CAACAGTCACACTGATAAGGAATTAATTAGAGCTAAAAGTTAGCTCATGT
TAATTCCGCAATCAGCAAATCATACACCCGGCATCATATGGCGGGTTAAA
ACTGCACGCCCGCTCCCACTCGTCCCAGTCCCACGGACTCCGACTTGTAG
CGTTTGAGTTCGGTCATTCAGTTCACTTCATCCTCTCATTCAGTCAACAC
AAATATTTTGCTTCCCACCCTCCCTGATACCCTTATTTAATCATATGCGC
CTTTTACTTGTACCTATTTCCTTTCgctgtttcttttctcttctaTTTTT
CAGATCAACCATCACCGACGACGGGAAGAGGACGCGCGCACCAAGTCATT
TCGATCAATCCTAGTCCCAGCGGTTTTTCCTGGTTTTTCCACGCTACAGG
TTTTTTAGCCCAGGGATTAGGTCGTTTGGGATGCATCTTGAGCTCGATCA
ATAGGTGTTTGTTAGTTTGCtcgttttgttttttcttttattgtttttcc
tttttgggtcgttttcttttttttccttccttttttttttcctcttttct
caTCGCTCCGTTACTCTCATAACAACGTCACACGGGAGGCTCCGGCTCTC
GTTATAGGCttaggttttatttttttttcaactttttcttgatttccAAC
GTCACGGCCTCCGGCTCTCGTTGTAggcttttgttctttttttcttttac
tcctTTCAACAACGTCACACGGGAGGCTCACACGGGAGGCTCCGGCTCTC
GTTATAGGCTAAGGtttccattttatttatttgattacgTCTCTTAGAAC
AGCGTGGAGACTCCGGCTCTCGTTGTACTCTTTGGGGTTAAACAACATCA
CGGCTCCAGCTCTCGTTATAGGCTAAGGTTTctcgtttttttttatcttt
ttttctttgattactCCTCTTAGAACAGCGTGGAGACTCCGGCTCTCGTT
GCACTCTTTGGGGTTAAACAACATCACGGCTCCGCCTCTTGTTGTAAGGC
TTAAGTTTTTTACTAGAACTAGAACCTTTAGTACTTACCATAAGGGCTAG
AATTCTTTAGTACTTACAGTTTAAGGGCTAGAACATTTTAGTACTTACAG
TTTAAGGGCTAGAACCTTTTAGTATTTACAGCTTAAGGGGGGGTGCGGGT
TACTACGTAAACCCCATCTAGTTCTATACATCAGATCAGATAGGCTCAGA
TCCACGGGAGGCTCCGGCTCTCGCTGCGATCTTCACAACCGTCCGCGGTT
ATATCAGATAGGCTCAGATCCACGGGAGGCTCCGGCTCTCGCTGCGGTCT
TCACAACCGTCCGCGGTTATAGGCTTTAAGTAGATTTATCTCTCGATGCA
TCCCCAAATGTCACGCCAAAACCAACACACTTTCTTACGTTTCATTTTAT
AGTCAAAATATCTCATTTCACAATTATACATTTGTCTCCCGTTCATTGCT
TCCCCTTGTTTATGTTTGGGGTATCTTATCACTATTTTCGGGTATTTCGA
CCATCATCAAAAACGCAGTTTTGGATTCCTCACTAGGCTAGGTTTATGAT
ACTCTTCACTCAACAGTCACACTGATAAGGAATTAACaggcaactttgtt
gtcatccccagaccttttagacgaacgcggtccttacgattttgagatag
aatattcgtcagattgtatgttttcacccatccctttagagcttcagcgt
ggtgggcag Run BLAST on NCBI transcript from alignment at sc0000511:214154..216012- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024834 ID=TCONS_00024834|Name=TCONS_00024834|organism=Clytia hemisphaerica|type=transcript|length=1859bp|location=Sequence derived from alignment at sc0000511:214154..216012- (Clytia hemisphaerica)
NNTCATTTCACAATTATACATTTGTCTCCCTTTCATTGCTTCCCCTTGTT
TATGTTTAGGGTATCTTATCACTATTTTCGGGTATTTCGACCATCATCAA
AAACGCATTTTTGGATTCCTCACTAGGCTAGGTTTATGATACTCTTCACT
CAACAGTCACACTGATAAGGAATTAATTAGAGCTAAAAGTTAGCTCATGT
TAATTCCGCAATCAGCAAATCATACACCCGGCATCATATGGCGGGTTAAA
ACTGCACGCCCGCTCCCACTCGTCCCAGTCCCACGGACTCCGACTTGTAG
CGTTTGAGTTCGGTCATTCAGTTCACTTCATCCTCTCATTCAGTCAACAC
AAATATTTTGCTTCCCACCCTCCCTGATACCCTTATTTAATCATATGCGC
CTTTTACTTGTACCTATTTCCTTTCGCTGTTTCTTTTCTCTTCTATTTTT
CAGATCAACCATCACCGACGACGGGAAGAGGACGCGCGCACCAAGTCATT
TCGATCAATCCTAGTCCCAGCGGTTTTTCCTGGTTTTTCCACGCTACAGG
TTTTTTAGCCCAGGGATTAGGTCGTTTGGGATGCATCTTGAGCTCGATCA
ATAGGTGTTTGTTAGTTTGCTCGTTTTGTTTTTTCTTTTATTGTTTTTCC
TTTTTGGGTCGTTTTCTTTTTTTTCCTTCCTTTTTTTTTTCCTCTTTTCT
CATCGCTCCGTTACTCTCATAACAACGTCACACGGGAGGCTCCGGCTCTC
GTTATAGGCTTAGGTTTTATTTTTTTTTCAACTTTTTCTTGATTTCCAAC
GTCACGGCCTCCGGCTCTCGTTGTAGGCTTTTGTTCTTTTTTTCTTTTAC
TCCTTTCAACAACGTCACACGGGAGGCTCACACGGGAGGCTCCGGCTCTC
GTTATAGGCTAAGGTTTCCATTTTATTTATTTGATTACGTCTCTTAGAAC
AGCGTGGAGACTCCGGCTCTCGTTGTACTCTTTGGGGTTAAACAACATCA
CGGCTCCAGCTCTCGTTATAGGCTAAGGTTTCTCGTTTTTTTTTATCTTT
TTTTCTTTGATTACTCCTCTTAGAACAGCGTGGAGACTCCGGCTCTCGTT
GCACTCTTTGGGGTTAAACAACATCACGGCTCCGCCTCTTGTTGTAAGGC
TTAAGTTTTTTACTAGAACTAGAACCTTTAGTACTTACCATAAGGGCTAG
AATTCTTTAGTACTTACAGTTTAAGGGCTAGAACATTTTAGTACTTACAG
TTTAAGGGCTAGAACCTTTTAGTATTTACAGCTTAAGGGGGGGTGCGGGT
TACTACGTAAACCCCATCTAGTTCTATACATCAGATCAGATAGGCTCAGA
TCCACGGGAGGCTCCGGCTCTCGCTGCGATCTTCACAACCGTCCGCGGTT
ATATCAGATAGGCTCAGATCCACGGGAGGCTCCGGCTCTCGCTGCGGTCT
TCACAACCGTCCGCGGTTATAGGCTTTAAGTAGATTTATCTCTCGATGCA
TCCCCAAATGTCACGCCAAAACCAACACACTTTCTTACGTTTCATTTTAT
AGTCAAAATATCTCATTTCACAATTATACATTTGTCTCCCGTTCATTGCT
TCCCCTTGTTTATGTTTGGGGTATCTTATCACTATTTTCGGGTATTTCGA
CCATCATCAAAAACGCAGTTTTGGATTCCTCACTAGGCTAGGTTTATGAT
ACTCTTCACTCAACAGTCACACTGATAAGGAATTAACAGGCAACTTTGTT
GTCATCCCCAGACCTTTTAGACGAACGCGGTCCTTACGATTTTGAGATAG
AATATTCGTCAGATTGTATGTTTTCACCCATCCCTTTAGAGCTTCAGCGT
GGTGGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024834-exon-sc0000511-1575043694:214154..216012 | TCONS_00024834-exon-sc0000511-1575043694:214154..216012 | Clytia hemisphaerica | exon |
| TCONS_00024834-exon-sc0000511-1510915933:214154..216012 | TCONS_00024834-exon-sc0000511-1510915933:214154..216012 | Clytia hemisphaerica | exon |
| TCONS_00024834-exon-sc0000511-1491911889:214154..216012 | TCONS_00024834-exon-sc0000511-1491911889:214154..216012 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000511 | supercontig | sc0000511:214154..216012 - |
Blast
The following BLAST results are available for this feature:
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