TCONS_00024587 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024587
Unique NameTCONS_00024587
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2690

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024587 ID=TCONS_00024587|Name=TCONS_00024587|organism=Clytia hemisphaerica|type=transcript|length=2690bp
TTCCACTAAAGAGAAATCTATTAGGTCAGCATTAAGAGCTGCAGTTGAGC
GGGATATCACACGAGATACAGTCACCATTGTTGATGGGTTGAATTACTTG
AAAAGTTTGAGATACGAAATGCATTGTATCGTTAAAGCAGAGAAAACTCT
GCATTGTGTCATCTATTGTGGAATAACCAAAGAAAAATGTAAAGAATGGA
ACGAAAGtcgaaatgaaaatgaaaaatatagagATGAAGTACTTGATGGA
TTGTTTATGCGGTTTGAACCACCTGATAGTAACAAAAGATGGGATTCTCC
ACTCTTCACTATAACACAAGAAACTCCATTGAGTTTTGATGATGTTTATG
ACTCTTTATACAAACGCAGTGCCCCACCTCCAAACCAATCAACAATACCT
ACTCCACTGAGTAGCGGGAATTTCATGCATGATTTAGATCAAGTTACTCA
GTCTATTATCAAAGAGATTTTGGACATGCAGAAAACTGCTATGATAGGTG
ATAGTATCAAGATAACAGATTCAACCGAGAAACTTGTTCTGTTAAAGCAA
CTGAATATGCCAGAGTTGAGAAGAATTAAACGCCAGTTTATCTCATACGC
AAAAATGCATCCAGTTGAGGACATGACTAAGCTTAGAAATATGTTTGTAC
AATTTTTGAATAATACCATACGATGAGTTACTATTATTTTTTAtaatcat
ttttagattttacacTACTTTAGTATTATTtaataaacttttgttttttc
gcTTTTACTACCGGCTACCTATGCCAAAGATTTTGTCTTGTTATTGGGAT
ACTTCTAGATAATCCCATCGACACAACTGCCAGGACTTTTCCTTCATATT
AAAcaaattattcaaatattttacACTGATTTGCAACTTTTTTGAGAAGA
TTTCTATACCGGGACTTTAAGATTATGTGTACTCATTATAATAATATGCT
TTATTCTAGTTTAAATACAAAGTATGTctataaatgaaataataacATTA
CAATTTGGAAATTATTCCAATTTTGTTGGGACCCATTATTGGAATTCTCA
TCAAAAACGATTATTAGAAAGAGAAAACTCTACAGAAGATAATCGAAATT
ACATCACTAAACTTTTCAGAGAAAGTCAGTCAAGTCGCACACGTTTTGTG
CCTCGGgcaatttgttttgatctgaaaaccAAGCTGCAAACATTAAAACA
AGATGGTACCTTTGCTGATGAGGATGATATTAGTGATGGATTCACAACTG
GAGCACAAGATGTAGGTGACATTGTCACTTACAATGAGCCTAAAATTGAG
CAAAACGATTTCGTAAAACAGGTACAATCAGGAGAATTCGATCAAAATGG
CaaagtaaaatttgaatttgaatcagAAGTTAAAACATGGAGTGATTATA
TGACGTATGAGTTGGATAACCACTCCATACAACTTTTATCAGAGAACTAT
AATGATGGggatgatttcaaattttttggtaaGGGACAAGATGAgtataa
aaatattgaagatgACTTTGAGGATTACCTTCATTACTGGGCTGAAGAAT
GTGATTATTTAGAAGGATTTCAGCTTATGAGTGACCTCCATAACGGTTAC
ACTGGTTTACAATCTAAAGTATTGGAATATCTTGCGGACGATTACAACAA
GAAAAGTAGACTCAGTTTTATGAACTGGTCAACCAGCACCACCTCCAAAG
ATGAAAAAGACGATTTTGACGTCATTTACCAATACCTGAATGTGGCTTTA
TCACTTCAAACAATGAAGAATTATAATTCATTGTCAGTGTTTCAAGGAAT
GCAATCAGATTATTTTAAAAGCTGTGATGGTGGAATACAAATCCCGTATG
TGGAATACCAGAATGACTTGGCATACCATACCAGTGCTATACTTGCAGCA
GCTCTAGACAGCACTACCATTCCACTCTACCAAACCCAGGGAACAATGAC
TATGTCTGAGTTATGCCACCACGTTTCACATGGAAAATGGAAACTGGCTG
GTACATCATTCGGTCTGCCTCTACAAGGTAGTCTCAGTGATGGCAACACT
CTATTTGATACCATGTTATCAGCTAAAGGATTCTACAACGGAATGTCAAC
TTGCTTATTCCCGAATCTGAAAGATGTTGCTTTGAAACCGAATTCTCAAC
TCGTTGTTCTTCAGAATTTATCATCAGATTTGGTATGTCCTGATCAAATT
GATAGCAAGATTCTCCAAGGGCTTGGATTGAATCGTAACGTTTTTAACAG
GCACCCAATGTCAGTTTTGGAGTATTTTAGTGAGAGATTCTACCCGTGTA
AAACAACATTGACCAAATTGTATTACAGCACTGACAAATTGAGACAAGAT
CAACCTTTCCCTGATTTGATCAAAGGTGAAAAAAATCCAACTACGTTTTC
TTCGCTGTACACATCACCatgtttttatgattttttacatggAATCGTGA
TGGCTTTGAGGAGAATGAATTTACACAAAGTTCACGCTATACAAGAGTTT
GGCTTGGATCGGGACATTATTACTGAGCTCACTGAAGATTTAGTACAGAT
TGCTCAAACGTATAATTATGAGAAAGCATTCCATGAACTGGAAGaatgaa
aatcattttttgtgaaatcagCAATCTTTAGTTCTTCCTTGGTGGGATGA
TCTACTTAATTATACGTATTATTACATACTTAATTATTAN
Run BLAST on NCBI

protein sequence of TCONS_00024587-protein

>TCONS_00024587-protein ID=TCONS_00024587-protein|Name=TCONS_00024587-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MSINEIITLQFGNYSNFVGTHYWNSHQKRLLERENSTEDNRNYITKLFRE
SQSSRTRFVPRAICFDLKTKLQTLKQDGTFADEDDISDGFTTGAQDVGDI
VTYNEPKIEQNDFVKQVQSGEFDQNGKVKFEFESEVKTWSDYMTYELDNH
SIQLLSENYNDGDDFKFFGKGQDEYKNIEDDFEDYLHYWAEECDYLEGFQ
LMSDLHNGYTGLQSKVLEYLADDYNKKSRLSFMNWSTSTTSKDEKDDFDV
IYQYLNVALSLQTMKNYNSLSVFQGMQSDYFKSCDGGIQIPYVEYQNDLA
YHTSAILAAALDSTTIPLYQTQGTMTMSELCHHVSHGKWKLAGTSFGLPL
QGSLSDGNTLFDTMLSAKGFYNGMSTCLFPNLKDVALKPNSQLVVLQNLS
SDLVCPDQIDSKILQGLGLNRNVFNRHPMSVLEYFSERFYPCKTTLTKLY
YSTDKLRQDQPFPDLIKGEKNPTTFSSLYTSPCFYDFLHGIVMALRRMNL
HKVHAIQEFGLDRDIITELTEDLVQIAQTYNYEKAFHELEE
Run BLAST on NCBI

transcript from alignment at sc0000504:95737..101410+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024587 ID=TCONS_00024587|Name=TCONS_00024587|organism=Clytia hemisphaerica|type=transcript|length=5674bp|location=Sequence derived from alignment at sc0000504:95737..101410+ (Clytia hemisphaerica)
TATAGtagatattttgatatttttaaatgttATAGCAGGGTCTTTCTACA
AAATCAAATTGATTCTTAGCAAATAGGTACCGTgaagtggagggaaactt
gcatagccctcaaattaaatgaatgacctggctggtcattaaatagaaag
ttaaatcaaaacaaaaatggtagagtagagctgcgggTGAGCCgaatagt
tcatttgttttgaaattttactgctttgattggtcagtcatttgatggct
atgcaagtttccctccactgatgcaagttacacGACTTCACAGTAGGATA
TACATTTCTGATTTCATCTTTCAAGGAAATAGTGCAAAAGCAACTTCTCA
TAAAAGAAATGTCTTGATATTGGatcattattttgattttaaagtgATTT
TTACCAAAACAAGAGCAGCAAATTTGaatcttatttttgttttcttttag
aCTCCACTAAAGAGAAATCTATTAGGTCAGCATTAAGAGCTGCAGTTGAG
CGGGATATCACACGAGATACAGTCACCATTGTTGATGGGTTGAATTACTT
GAAAAGTTTGAGATACGAAATGCATTGTATCGTTAAAGCAGAGAAAACTC
TGCATTGTGTCATCTATTGTGGAATAACCAAAGAAAAATGTAAAGAATGG
AACGAAAGtcgaaatgaaaatgaaaaatatagagATGAAGTACTTGATGG
ATTGTTTATGCGGTTTGAACCACCTGATAGTAACAAAAGATGGGATTCTC
CACTCTTCACTATAACACAAGAAACTCCATTGAGTTTTGATGATGTTTAT
GACTCTTTATACAAACGCAGTGCCCCACCTCCAAACCAATCAACAATACC
TACTCCACTGAGTAGCGGGAATTTCATGCATGATTTAGATCAAGTTACTC
AGTCTATTATCAAAGAGATTTTGGACATGCAGAAAACTGCTATGATAGGT
GATAGTATCAAGATAACAGATTCAACCGAGAAACTTGTTCTGTTAAAGCA
ACTGAATATGCCAGAGTTGAGAAGAATTAAACGCCAGTTTATCTCATACG
CAAAAATGCATCCAGTTGAGGACATGACTAAGCTTAGAAATATGTTTGTA
CAATTTTTGAATAATACCATACGATGAGTTACTATTATTTTTTAtaatca
tttttagattttacacTACTTTAGTATTATTtaataaacttttgtttttt
cgcTTTTACTACCGGCTACCTATGCCAAAGATTTTGTCTTGTTATTGGGA
TACTTCTAGATAATCCCATCGACACAACTGCCAGGACTTTTCCTTCATAT
TAAAcaaattattcaaatattttacACTGATTTGCAACTTTTTTGAGAAG
ATTTCTATACCGGGACTTTAAGATTATGTGTACTCATTATAATAATATGC
TTTATTCTAGTTTAAATACAAAGTATGTctataaatgaaataataacATT
ACAATTTGGAAATTATTCCAATTTTGTTGGGACCCATTATTGGAATTCTC
ATCAAAAACGATTATTAGAAAGAGAAAACTCTACAGAAGATAATCGAAAT
TACATCACTAAACTTTTCAGAGAAAGTCAGTCAAGTCGCACACGTTTTGT
GCCTCGGgcaatttgttttgatctgaaaaccAAGCTGCAAACATTAAAAC
AAGATGGTACCTTTGCTGATGAGGATGATATTAGTGATGGATTCACAACT
GGAGCACAAGATGTAGGTGACATTGTCACTTACAATGAGCCTAAAATTGA
GCAAAACGATTTCGTAAAACAGGTACAATCAGGAGAATTCGATCAAAATG
GCaaagtaaaatttgaatttgaatcagAAGTTAAAACATGGAGTGATTAT
ATGACGTATGAGTTGGATAACCACTCCATACAACTTTTATCAGAGAACTA
TAATGATGGggatgatttcaaattttttggtaaGGGACAAGATGAgtata
aaaatattgaagatgACTTTGAGGATTACCTTCATTACTGGGCTGAAGAA
TGTGATTATTTAGAAGGATTTCAGGTAAGGTTTCACATATTTATCTTAAA
ATGGAAatcttaaattgattttgaaagaaGACTAGAATGCTGAAAGCATA
GACTATTTGGTTATGAATCCTTTTCTCGCCAACACTTGTAACAAAGATAT
TATAAAGATGCATCTTGAGTCTCTTCGAAATCCAAAGTTTGTCAAAGTTT
GTCAAGAATAACATTGTGAtgttaaaagtcaaatttcaaagaaaaaaaaa
tgaaatttaattttaaagggCCTCCAAATTCATCTGTTTTTGAGTAACTT
TCTTGTTATTCTGGTTATTAATTCTTCTGTCATTTTCTAAATTCTGTATC
AATATTATGTTCAAGATCATTCAAAAAGTAAAgtctgaattgaaattgaa
ccAGATCATGGTTTTGGTGTCTTTCATCAAGGATTTTTCgtttctctttc
tttttttaatgtGTATTCGACATCTATTTCTGTACTTTGTTAATAGCTTA
TGAGTGACCTCCATAACGGTTACACTGGTTTACAATCTAAAGTATTGGAA
TATCTTGCGGACGATTACAACAAGAAAAGTAGACTCAGTTTTATGAACTG
GTCAACCAGCACCACCTCTAAAGATGAAAAAGACGATTTTGACGTCATTT
ACCAATACCTGAATGTGGCTTTATCACTTCAAACAATGAAGAATTATAAT
TCATTGTCAGTGTTTCAAGGAATGCAATCAGATTATTTTAAAAGCTGTGA
TGGTGGAATACAAATCCCGTATGTGGAATACCAGGTAGCTTTTTTATGTG
AAATTATGATAAATCCACAGTCGCAATGAATCATATATCAGGTATCAGGG
TTGATCGCATTCCAATAGCAGGTTAAGGCCTATAAGTCTAAACTTTCCTT
TTTTATGCAGAGTTTCGAAAGTGTTGAATAGAACTTTTCAGTCAGACAAA
AGATTACCATAAGTCAAAAATGCTTACTTTCAAGAGGCAAAGTTAGTTTC
TAATCAGTCTTGATGCAAATTTAATCAGATATTATCGATCAGTTAATTAA
CTTCAGTAAGTTCAGGTAATTATAAGACAATTTATTAATCTAATACCACG
ATAGTGTCTATGTTGCTGCATTGATTGTTGATTAAACCTGGGTGATTTTG
CATTTGAAAACGATTTAAAACCTTTTCTATAATAAATTTATTTGGTATTT
GTATCTTGATTGAGTTTGAGGAACTATGTCTATACACAGAGTTGTTATGT
TATTTATCAGGCCGAGTCTATTATTCAGAAAAGAAGTGACGTGTTTTTGA
TAgagagaaaatcagacttttcactaaaagaacaccccccttctcacaga
cccactggcaATCCTTCCCACggtaaaattgtccaaaatatcatccccgg
tggaaaataattatcaatttttgtccccactgataataaccaaataaacc
aatcctcactgcaaaatattatgctattttcccatCCCCGCTGACTTTtc
tagtttgaaaataaaataattgaaTCCCCAGCCATAACGAGTTTCAGTCA
ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATTTTTCgtttctct
ttctttttttaatgtGTATTCGACATCTATTTCTGTACTTTGTTAATAGC
TTATGAGTGACCTCCATAACGGTTACACTGGTTTACAATCTAAAGTATTG
GAATATCTTGCGGACGATTACAACAAGAAAAGTAGACTCAGTTTTATGAA
CTGGTCAACCAGCACCACCTCCAAAGATGAAAAAGACGATTTTGACGTCA
TTTACCAATACCTGAATGTGGCTTTATCACTTCAAACAATGAAGAATTAT
AATTCATTGTCAGTGTTTCAAGGAATGCAATCAGATTATTTTAAAAGCTG
TGATGGTGGAATACAAATCCCGTATGTGGAATACCAGGTAGCTTTTTTAT
GTGAAATTATGATAAATCCACAGTCGCAATGAATCATGGGGTATCAGGGT
TGATCGCATTCCAATAGCAGGTTAAGGCCTATAAGtctaaacttttcttt
tttatccaGAGTTTTGAAAGTGTTGAATAGAACTTTTCAGTCAGACAAAA
GATTACCATAAGTCAAAAATGCTTACTTTTAAGAGGCAAAGTTAGTTTCT
AATCAGTCTTGATGCAAATTTAATCAGATATTATCGATCAGTTAATTAAC
TTCAGTAAGTTCAGGTAGTTATAAGACAATTTATTAATCTAATACCACGA
TAGTGTCTATGTTGCTGCATTGATTGTTGATAGTCCTAGTGATTTAAACC
TGGGTGATTCGGATTTGAAAACGATTTAAAACCTTTTCTATAATAAATTT
ATTTGGTATTTGTATCTTGATTGAGTTTGAGGAACTATGTTTACACACAG
AGTTGTTATGTTATTTATCAGGCCAAGTCTATTATTCAGAAAAGAAGTGA
CGTGTTTTTGCTAgagagaaaatcagacttttcactaaaagaacaccccc
ttctcatagacccactgggaatccttcccactgaaaaattgtccaaaata
tcatccccggtggaaaataattatcaatttttgtccccactgataataac
caaataaaccaatcctaaCTGCAAAAattatgctattttcccatCCCCGC
TGACTTTtctagtttgaaaataaaagaattgaatCCCCAGCCATAACGAG
TTTCAGTcaattatttttatccccaaaaaatcctactgggtctgtgagaa
gagggtgtaaaAGAGTTACCATGATATAATTTTTATCGACTTTAGAATGA
CTTGGCATACCATACCAGTGCTATACTTGCAGCAGCTCTAGACAGCACTA
CCATTCCACTCTACCAAACCCAGGGAACAATGACTATGTCTGAGTTATGC
CACCACGTTTCACATGGAAAATGGAAACTGGCTGGTACATCATTCGGTCT
GCCTCTACAAGGTAGTCTCAGTGATGGCAACACTCTATTTGATACCATGT
TATCAGCTAAAGGATTCTACAACGGAATGTCAACTTGCTTATTCCCGAAT
CTGAAAGATGTTGCTTTGAAACCGAATTCTCAACTCGTTGTTCTTCAGAA
TTTATCATCAGATTTGGTATGTCCTGATCAAATTGATAGCAAGATTCTCC
AAGGGCTTGGATTGAATCGTAACGTTTTTAACAGGCACCCAATGTCAGTT
TTGGAGTATTTTAGTGAGAGATTCTACCCGTGTAAAACAACATTGACCAA
ATTGTATTACAGCACTGACAAATTGAGACAAGATCAACCTTTCCCTGATT
TGATCAAAGGTGAAAAAAATCCAACTACGTTTTCTTCGCTGTACACATCA
CCatgtttttatgattttttacatggAATCGTGATGGCTTTGAGGAGAAT
GAATTTACACAAAGTTCACGCTATACAAGAGTTTGGCTTGGATCGGGACA
TTATTACTGAGCTCACTGAAGATTTAGTACAGATTGCTCAAACGTATAAT
TATGAGAAAGCATTCCATGAACTGGAAGaatgaaaatcattttttgtgaa
atcagCAATCTTTAGTTCTTCCTTGGTGGGATGATCTACTTAATTATACG
TATTATTACATACTTAATTATTAN

Coding sequence (CDS) from alignment at sc0000504:95737..101410+

>TCONS_00024587 ID=TCONS_00024587|Name=TCONS_00024587|organism=Clytia hemisphaerica|type=CDS|length=4878bp|location=Sequence derived from alignment at sc0000504:95737..101410+ (Clytia hemisphaerica)
ATGTctataaatgaaataataacATTACAATTTGGAAATTATTCCAATTT
TGTTGGGACCCATTATTGGAATTCTCATCAAAAACGATTATTAGAAAGAG
AAAACTCTACAGAAGATAATCGAAATTACATCACTAAACTTTTCAGAGAA
AGTCAGTCAAGTCGCACACGTTTTGTGCCTCGGgcaatttgttttgatct
gaaaaccAAGCTGCAAACATTAAAACAAGATGGTACCTTTGCTGATGAGG
ATGATATTAGTGATGGATTCACAACTGGAGCACAAGATGTAGGTGACATT
GTCACTTACAATGAGCCTAAAATTGAGCAAAACGATTTCGTAAAACAGGT
ACAATCAGGAGAATTCGATCAAAATGGCaaagtaaaatttgaatttgaat
cagAAGTTAAAACATGGAGTGATTATATGACGTATGAGTTGGATAACCAC
TCCATACAACTTTTATCAGAGAACTATAATGATGGggatgatttcaaatt
ttttggtaaGGGACAAGATGAgtataaaaatattgaagatgACTTTGAGG
ATTACCTTCATTACTGGGCTGAAGAATGTGATTATTTAGAAGGATTTCAG
CTTATGAGTGACCTCCATAACGGTTACACTGGTTTACAATCTAAAGTATT
GGAATATCTTGCGGACGATTACAACAAGAAAAGTAGACTCAGTTTTATGA
ACTGGTCAACCAGCACCACCTCCAAAGATGAAAAAGACGATTTTGACGTC
ATTTACCAATACCTGAATGTGGCTTTATCACTTCAAACAATGAAGAATTA
TAATTCATTGTCAGTGTTTCAAGGAATGCAATCAGATTATTTTAAAAGCT
GTGATGGTGGAATACAAATCCCGTATGTGGAATACCAGAATGACTTGGCA
TACCATACCAGTGCTATACTTGCAGCAGCTCTAGACAGCACTACCATTCC
ACTCTACCAAACCCAGGGAACAATGACTATGTCTGAGTTATGCCACCACG
TTTCACATGGAAAATGGAAACTGGCTGGTACATCATTCGGTCTGCCTCTA
CAAGGTAGTCTCAGTGATGGCAACACTCTATTTGATACCATGTTATCAGC
TAAAGGATTCTACAACGGAATGTCAACTTGCTTATTCCCGAATCTGAAAG
ATGTTGCTTTGAAACCGAATTCTCAACTCGTTGTTCTTCAGAATTTATCA
TCAGATTTGGTATGTCCTGATCAAATTGATAGCAAGATTCTCCAAGGGCT
TGGATTGAATCGTAACGTTTTTAACAGGCACCCAATGTCAGTTTTGGAGT
ATTTTAGTGAGAGATTCTACCCGTGTAAAACAACATTGACCAAATTGTAT
TACAGCACTGACAAATTGAGACAAGATCAACCTTTCCCTGATTTGATCAA
AGGTGAAAAAAATCCAACTACGTTTTCTTCGCTGTACACATCACCatgtt
tttatgattttttacatggAATCGTGATGGCTTTGAGGAGAATGAATTTA
CACAAAGTTCACGCTATACAAGAGTTTGGCTTGGATCGGGACATTATTAC
TGAGCTCACTGAAGATTTAGTACAGATTGCTCAAACGTATAATTATGAGA
AAGCATTCCATGAACTGGAAGaatgaATGTctataaatgaaataataacA
TTACAATTTGGAAATTATTCCAATTTTGTTGGGACCCATTATTGGAATTC
TCATCAAAAACGATTATTAGAAAGAGAAAACTCTACAGAAGATAATCGAA
ATTACATCACTAAACTTTTCAGAGAAAGTCAGTCAAGTCGCACACGTTTT
GTGCCTCGGgcaatttgttttgatctgaaaaccAAGCTGCAAACATTAAA
ACAAGATGGTACCTTTGCTGATGAGGATGATATTAGTGATGGATTCACAA
CTGGAGCACAAGATGTAGGTGACATTGTCACTTACAATGAGCCTAAAATT
GAGCAAAACGATTTCGTAAAACAGGTACAATCAGGAGAATTCGATCAAAA
TGGCaaagtaaaatttgaatttgaatcagAAGTTAAAACATGGAGTGATT
ATATGACGTATGAGTTGGATAACCACTCCATACAACTTTTATCAGAGAAC
TATAATGATGGggatgatttcaaattttttggtaaGGGACAAGATGAgta
taaaaatattgaagatgACTTTGAGGATTACCTTCATTACTGGGCTGAAG
AATGTGATTATTTAGAAGGATTTCAGCTTATGAGTGACCTCCATAACGGT
TACACTGGTTTACAATCTAAAGTATTGGAATATCTTGCGGACGATTACAA
CAAGAAAAGTAGACTCAGTTTTATGAACTGGTCAACCAGCACCACCTCCA
AAGATGAAAAAGACGATTTTGACGTCATTTACCAATACCTGAATGTGGCT
TTATCACTTCAAACAATGAAGAATTATAATTCATTGTCAGTGTTTCAAGG
AATGCAATCAGATTATTTTAAAAGCTGTGATGGTGGAATACAAATCCCGT
ATGTGGAATACCAGAATGACTTGGCATACCATACCAGTGCTATACTTGCA
GCAGCTCTAGACAGCACTACCATTCCACTCTACCAAACCCAGGGAACAAT
GACTATGTCTGAGTTATGCCACCACGTTTCACATGGAAAATGGAAACTGG
CTGGTACATCATTCGGTCTGCCTCTACAAGGTAGTCTCAGTGATGGCAAC
ACTCTATTTGATACCATGTTATCAGCTAAAGGATTCTACAACGGAATGTC
AACTTGCTTATTCCCGAATCTGAAAGATGTTGCTTTGAAACCGAATTCTC
AACTCGTTGTTCTTCAGAATTTATCATCAGATTTGGTATGTCCTGATCAA
ATTGATAGCAAGATTCTCCAAGGGCTTGGATTGAATCGTAACGTTTTTAA
CAGGCACCCAATGTCAGTTTTGGAGTATTTTAGTGAGAGATTCTACCCGT
GTAAAACAACATTGACCAAATTGTATTACAGCACTGACAAATTGAGACAA
GATCAACCTTTCCCTGATTTGATCAAAGGTGAAAAAAATCCAACTACGTT
TTCTTCGCTGTACACATCACCatgtttttatgattttttacatggAATCG
TGATGGCTTTGAGGAGAATGAATTTACACAAAGTTCACGCTATACAAGAG
TTTGGCTTGGATCGGGACATTATTACTGAGCTCACTGAAGATTTAGTACA
GATTGCTCAAACGTATAATTATGAGAAAGCATTCCATGAACTGGAAGaat
gaATGTctataaatgaaataataacATTACAATTTGGAAATTATTCCAAT
TTTGTTGGGACCCATTATTGGAATTCTCATCAAAAACGATTATTAGAAAG
AGAAAACTCTACAGAAGATAATCGAAATTACATCACTAAACTTTTCAGAG
AAAGTCAGTCAAGTCGCACACGTTTTGTGCCTCGGgcaatttgttttgat
ctgaaaaccAAGCTGCAAACATTAAAACAAGATGGTACCTTTGCTGATGA
GGATGATATTAGTGATGGATTCACAACTGGAGCACAAGATGTAGGTGACA
TTGTCACTTACAATGAGCCTAAAATTGAGCAAAACGATTTCGTAAAACAG
GTACAATCAGGAGAATTCGATCAAAATGGCaaagtaaaatttgaatttga
atcagAAGTTAAAACATGGAGTGATTATATGACGTATGAGTTGGATAACC
ACTCCATACAACTTTTATCAGAGAACTATAATGATGGggatgatttcaaa
ttttttggtaaGGGACAAGATGAgtataaaaatattgaagatgACTTTGA
GGATTACCTTCATTACTGGGCTGAAGAATGTGATTATTTAGAAGGATTTC
AGCTTATGAGTGACCTCCATAACGGTTACACTGGTTTACAATCTAAAGTA
TTGGAATATCTTGCGGACGATTACAACAAGAAAAGTAGACTCAGTTTTAT
GAACTGGTCAACCAGCACCACCTCCAAAGATGAAAAAGACGATTTTGACG
TCATTTACCAATACCTGAATGTGGCTTTATCACTTCAAACAATGAAGAAT
TATAATTCATTGTCAGTGTTTCAAGGAATGCAATCAGATTATTTTAAAAG
CTGTGATGGTGGAATACAAATCCCGTATGTGGAATACCAGAATGACTTGG
CATACCATACCAGTGCTATACTTGCAGCAGCTCTAGACAGCACTACCATT
CCACTCTACCAAACCCAGGGAACAATGACTATGTCTGAGTTATGCCACCA
CGTTTCACATGGAAAATGGAAACTGGCTGGTACATCATTCGGTCTGCCTC
TACAAGGTAGTCTCAGTGATGGCAACACTCTATTTGATACCATGTTATCA
GCTAAAGGATTCTACAACGGAATGTCAACTTGCTTATTCCCGAATCTGAA
AGATGTTGCTTTGAAACCGAATTCTCAACTCGTTGTTCTTCAGAATTTAT
CATCAGATTTGGTATGTCCTGATCAAATTGATAGCAAGATTCTCCAAGGG
CTTGGATTGAATCGTAACGTTTTTAACAGGCACCCAATGTCAGTTTTGGA
GTATTTTAGTGAGAGATTCTACCCGTGTAAAACAACATTGACCAAATTGT
ATTACAGCACTGACAAATTGAGACAAGATCAACCTTTCCCTGATTTGATC
AAAGGTGAAAAAAATCCAACTACGTTTTCTTCGCTGTACACATCACCatg
tttttatgattttttacatggAATCGTGATGGCTTTGAGGAGAATGAATT
TACACAAAGTTCACGCTATACAAGAGTTTGGCTTGGATCGGGACATTATT
ACTGAGCTCACTGAAGATTTAGTACAGATTGCTCAAACGTATAATTATGA
GAAAGCATTCCATGAACTGGAAGaatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013809XLOC_013809Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024587-proteinTCONS_00024587-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024587-exon-sc0000504-1491911889:95737..95737TCONS_00024587-exon-sc0000504-1491911889:95737..95737Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1510915933:95737..95737TCONS_00024587-exon-sc0000504-1510915933:95737..95737Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1575043694:95737..95737TCONS_00024587-exon-sc0000504-1575043694:95737..95737Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1491911889:96189..97760TCONS_00024587-exon-sc0000504-1491911889:96189..97760Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1510915933:96189..97760TCONS_00024587-exon-sc0000504-1510915933:96189..97760Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1575043694:96189..97760TCONS_00024587-exon-sc0000504-1575043694:96189..97760Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1491911889:99436..99723TCONS_00024587-exon-sc0000504-1491911889:99436..99723Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1510915933:99436..99723TCONS_00024587-exon-sc0000504-1510915933:99436..99723Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1575043694:99436..99723TCONS_00024587-exon-sc0000504-1575043694:99436..99723Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1491911889:100582..101410TCONS_00024587-exon-sc0000504-1491911889:100582..101410Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1510915933:100582..101410TCONS_00024587-exon-sc0000504-1510915933:100582..101410Clytia hemisphaericaexon
TCONS_00024587-exon-sc0000504-1575043694:100582..101410TCONS_00024587-exon-sc0000504-1575043694:100582..101410Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000504supercontigsc0000504:95737..101410 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	9.66006e-05	0.387066	0	1.18386	0.159807	1.07007	6.36841e-05	0	0.0103786	1.92389	0.294212	0.66237	0.447235	0.0416532	1.4218	0.0470615	2.01841	0	0	2.45377	0	6.87626e-06	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003008Tubulin_FtsZ_GTPase
IPR019605Misato_II_tubulin-like
IPR029209DML1/Misato_tubulin
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
Blast
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BLAST of TCONS_00024587 vs. Swiss-Prot (Human)
Match: MSTO1 (Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.438e-46
Identity = 137/578 (23.70%), Postives = 246/578 (42.56%), Query Frame = 2 
Query:  983 NEIITLQFGNYSNFVGTHYWNSHQKRLLERENSTEDNRNYITK-LFRESQS--SRTRFVPRAICFDLKTKLQTLKQDGTFADEDDISDGFTTGAQDVGDIVTYNEPKIEQNDF------------------VKQVQSGEFDQ------NGKVKFEFESEVKTWSDYMTYELDNHSIQLLSENYNDGDDFKF--FGKGQDEYKNI--EDDFEDYLHYWAEECDYLEGFQLMSDLHNGYTGLQSKVLEYLADDYNKKSRLSFMNWSTSTTSKDEKDDFDVIYQYLNVALSLQTMKNYNSLSVFQGMQSDYFKSCDGGIQIPYVEYQNDLAYHTSAILAAALDSTTIPLYQTQGTMTMSELCHHVSHGKWKLAGTSFGLPLQGSLSDGNTLFDTMLSAKGF--YNGMSTCLFPNLKDVALKPNSQLVVLQNLSSDLVC-PDQIDSKILQGLGLNRNVFNRHPMSVLEYFSERFYPCKTTLTKLYYSTDKLRQDQPFPDLIKGEKNP----------------TTFSSLYTSPCFYDFLHGIVMALRRMNLHKVHAIQEFGLDRDIITELTEDLVQIAQTYN 2566
             E++TLQ G+++ FVG H+WN     L    +S E         L+R  ++   +  + PR I  DLK  L +LK++G    +  +           G + T+ E    +N +                  VK + +G+           K     E+ ++ WSD++   L   SI ++ +  +DG+  +   FG+G+   K    +++ ED LH++ EECDYL+GFQ++ DLH+G++G+ +K  E L D+Y+ +     + W          +    IY+ LN A  L  +  ++SL     +        +  +  PY+ Y   L +H SAILA ALD+ T+P       ++M  L   +S    K+      +P    L+ G +L D+++   G   +  +S C  P+      +  +Q VVL+ +  D  C   Q+         L+          +L  + ++  P   + + L  +    R   P+P L      P                  F +L +S   +  L  +   L +++L +  +  + G++ D + EL ++L  +AQ Y 
Sbjct:    6 REVLTLQLGHFAGFVGAHWWNQQDAALGRATDSKEPPGELCPDVLYRTGRTLHGQETYTPRLILMDLKGSLSSLKEEGGLYRDKQLDAAIAW----QGKLTTHKEELYPKNPYLQDFLSAEGVLSSDGVWRVKSIPNGKGSSPLPTATTPKPLIPTEASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHFYVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGR---GIITWGLLPGPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVSFPYLHYDATLPFHCSAILATALDTVTVPYRLCSSPVSMVHLADMLSFCGKKVVTAGAIIPF--PLAPGQSLPDSLMQFGGATPWTPLSACGEPS----GTRCFAQSVVLRGI--DRACHTSQLTPGTPPPSALHACTTGEE---ILAQYLQQQQPGVMSSSHLLLT--PCRVAPPYPHLFSSCSPPGMVLDGSPKGAAVESIPVFGALCSSSSLHQTLEALARDLTKLDLRRWASFMDAGVEHDDVAELLQELQSLAQCYQ 563
The following BLAST results are available for this feature:
BLAST of TCONS_00024587 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSTO17.438e-4623.70Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 ... [more]
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