TCONS_00024579 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024579
Unique NameTCONS_00024579
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2416

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024579 ID=TCONS_00024579|Name=TCONS_00024579|organism=Clytia hemisphaerica|type=transcript|length=2416bp
CCTCTGAAGAGAGGGAAGGAAACACAAGAAGAGGGAAAACAAGCAGAGTG
GAACCATGGAGTTCACGAAAATGGTCGGGCTCGTTGCTTTGGTGTTTCTT
ATTggagtgacgtcatcaagtgAAATTGTGGAAGAATTCGTTCCAAGTGA
CGAACATGTTGAACAGGTTCAAGATGTGTTGGCAAAAACTGGCTGTCCTG
GAGTTCGTCTTGAGAGAGTGGGATGCTTTAATGAACTAACATCGGATGAT
GGCATACATAGAACAATGAAAGAACAAATTTTGAATGGTCGTGACAAAGG
ATCAGCCGTATATGAAGGACCATTCTTGTCATGGCAAAACTACCACGATT
GGCTTATCAACTTTGCATGCAGATGTGGTCAAAAGGTTGCTGCCCGTGGA
GGATCCATCTTTTCACTACAATTTTTCGGTGAATGTTGGACAGACTTCCC
AAAGGGAAAAGGCAAAGTTGAATACGCCAAACATGGATTATCTAACGGAT
GTTATGCCAGTAACTTCGATAAATACACTGGATCTCCAGTACAAACCAAA
TGGTATACCGGTGATCAGAAAACAAACTTCGTCTACAGAGCTATCCCTAT
CGTCAAATCAACTACCCCACCACCAACAGAAGCGGTTCCAACACCCGCTA
ACGCACAAACAAAGCCAGCACCAACCGCTAAAACTCTACCACCACCTCCA
CCAACCGCTGAAACTCCACCACCTACACCACCAACAGCTAAAACTCCACC
ACCACCTACACCACCAACCGCTAAAACTCTACCACCACCCACACTACCAA
CTGAACCAAAAACAGTAAAACCACCCACCAAACCAGCTACTTGCAAGCCA
GCTCATGTTCTCAAAATGTTTCATGCTTACACAAAGAAAACTCTACAAAA
GACATGGTTTATGCGATTCCAAATCATGCCTACAGGAATCGTTAGCAGAA
AATACGCCAGTATTGTCCACGTGACAACTAATCACAACATCAAACACTAC
GGTAGCCGAGTTCCAGGAATCTGGTTCCGACCAAACAGCAACAGCCTTCA
TATCTGTTCTGCAGTCAACGGCAACAAAAACTTTTGCTATAACAGTAAAC
CCCTTGCACAAGGAAAATACACCACCGTTTTGGTTCGACAGGTGAAACAA
GTAAAAGGAAACAAATATCTTTATCAAATCTACATCAACGGACGCAGAGT
TATgaataaaatcaacaaagacCCAAGAGTCTTTAAAAACGTTAAACTTT
ACCGAAGTGACCCGTGGTACCCAGCCACTAAAGCTTGCgtcaaaagtttc
atttttggTAACATCCGCAATAGAAACCcacaagCATGCCAAAACgttaa
aaaccaaattttgaaaggaCGAAAACTTCGTGTGTTACCAAAACTTCTCA
GAGGATACACCCTCAAATTCAATATCAAACCATATGGATTCATCACCAAG
AAATATGCAAGCATCTTCCATGCAACAACCGGTGGTAACGTCAGAGTTTA
CGGTGACCGTACGCCTGGAATCTGGTTCCTACCAAACACAACTCGTTTAC
ACATCTGTTCAGCTATTGgtggaaacaaaaataaatgtttcaACACAGCT
CAACTGGACGAAGATAAATCTTACAATATTGTCGTTCGACAAGTCCAAAA
gtggaatttgaaatattatttccAAGTGTTCTTGAATGGAAGGAAGATTG
TAGATAAATTGAACACCAaaccaaaagttttcaagaATGTACAACTATGG
AATGGCGACAAATGGTACAGACCAGCCCAAGCTTGTATCTCAAAAATCTC
GTTCAGAAATATCAAGCACAGAGCTTTCAGGAGACCAATCAAAAACAAAG
CAGTGTTGAGAAAGAAGACTTTACTACGCGGATGGACATTAACAATGCAT
ATCAAACCAAACGGTACAATCCCTGGATGGTCTAACATCTTACATGCTAC
TATTGGCCAGAACGGCAAAAGATATGGCGATCGTACCCCAGGTGTCTGGT
TCATCTCAAAAACCAATAAACTTCACATCTGTTCTGCAGTCAATGGACAA
AGCAACCATTGCTTCAACAGCAAACCTTTACCAaaaaacaaatacaacaa
aGTGATCATTCGGCAAGTACAAAAGAAAGTACCAAACAATTTCCTTAAAT
ATTTCTACGAAATATTCATTAATGGCAAGAGAGTTAAAAGTATTATCAAC
AATAAGCCAAAAGTCTTCAAGAATGTCACCTACTACATCAGTGATCCATG
GTATAACCCAGCCAAAGCCATCCTGAGAAGCTTGGATCTGAAAATGCACA
AACACAAAGAATCGTACGCGGTTAGAAAGAAGCGCGTTATCATGCgaaga
aagaaattattgaGAGGGTGGACTTTGTCAATGAGCATTAAACCAACTGG
TACAGTTAGTGGGTGG
Run BLAST on NCBI

transcript from alignment at sc0000504:45906..59030+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024579 ID=TCONS_00024579|Name=TCONS_00024579|organism=Clytia hemisphaerica|type=transcript|length=13125bp|location=Sequence derived from alignment at sc0000504:45906..59030+ (Clytia hemisphaerica)
CCTCTGAAGAGAGGGAAGGAAACACAAGAAGAGGGAAAACAAGCAGAGTG
GAACCATGGAGTTCACGAAAATGTAAGTCACTCAAAATCAAGAATTTCTg
ggataaaatttattttctttcattttacttTTGTCTATCTTCAAATNtat
tttctttcattttactttttgtCATTATCATCTTCCTTTTGTCTatcttc
aaatcttcaaaaaCTCAATTAAAATTGTTTTAAGACTTCACAGTAACATG
GGCcctcttttaaaaaaaactggcTTAAAGTTCCCTAAATTTGACTGGAG
ATTTGCAAAACCGGTATAGAACATGTTTTAGTGGGTGCAATTTTATAAGT
CCGTTTCTACTACGATTGACGTCCCTTTAAAGGGTGGTCGGGGTCAAGTT
TTTACCATGCTTACTCCATTTAATTTGGACACTTTCACTAACAAAGTTAT
AGTATTTACAGGTTCCGAAATCAACTAAAGTAGAGATAAAGTTGACGCGC
TCTAATTTGACGTTCTGCTATTTGATAATCTTCATTTTTCGATATCATTG
AAACTTAACGTCAACAAAAAAATCTCATTAACGATGCTCTACTTCGATAC
GCTctattaggcgagaccaatttgattagttgttttacgggcttGACCGG
CCTTGAaatgccaaaaatcaaaatcaaaataaaattgattttgctgGTAC
ATTTACATTTTCATTGCTATACAGACTgccagattttcaaaattttggta
ttttttccaaggttttgagagtGTTATGTtcagttttttcattttatccg
tGAAATCGTAATTTCGGTGtcttttcattttctatttcgcatttttgtaa
agatgtagtagtttttgctgcctttttaggataaattctacttttatttt
tatttttttaccggCCGACCGACCGCGACCGACAGACAGACCCTCTTTTT
GGGTAGCTCGGCCCGTAAAACagcaaattaaattggcctcgccttattcg
ataatatcaagtccccgtcaacaagaaactcctatacaacgctctactat
tcgatgaaaatccaattcttcttgaaaatcgaattagagagcgtcaactg
tagctTGCTAACATTATATCCAAAATCACAGGTCggccaaaatagaaaaa
acataCAAACTGCATGTACTACCACTTTCCTAAATTGTGGCAATCTTAAT
CTAAAATTAGGAAGAAATTATATACAAATATTTTGTTTCTATTTCAGGGT
CGGGCTCGTTGCTTTGGTGTTTCTTATTggagtgacgtcatcaagtgAAA
TTGTGGAAGAATTCGTTCCAAGTGACGAACATGTTGAACAGGTTCAAGAT
GTGTTGGCAAAAACTGGTAAGGCAAAAGTGTGAAATGCGGATTAAAATCT
TATACAAGCGTTTTGGGGAGATTCCACTTGTTGGACAGTACATTTGTTCa
acaaatctttaaaattgTCGAACTGATGCACCAGTTGTTCAACAGTTATT
AGTTTGACATCTATTTGTTCGACTGCTTGATTGTACGACAACCCACTTGT
TTTTTTTAcgaatttgtcgaacaagtgATTTGTCGAACAAATGGGTTGTC
GAACATGTGACATATCACCAGCGTTTTTCGAAACGACTTAATAGCTCAAC
ACAGCTTTTATGTTTTAACAATAATTAGAATCTTTATGTAAaattgatat
ataaaaattgtcatggaaaaaagtttgcagcgaaaaaaaaattatattca
attCGGAAGAAATTTTTCCCTTGATTGgacaaaaagataaaagagagttg
cctctctctaattcgatctttctgggactatattttttattcgaaaTATA
GAGAGCGTTTATCATTTCTTCCCATCTGAGAAGACAAAGATTTTAACTCG
AATTACACAGACCTACAGgaaggttcgaattatagagacttGGCTGTAAC
TACAATATTTTCTTTCCCCTTCAGATTATAGAGATTTTCACTGTAGTTCA
AAATCTTACAATATTTTCTTTCCCCTTTAGGCTGTCCTGGAGTTCGTCTT
GAGAGAGTGGGATGCTTTAATGAACTAACATCGGATGATGGCATACATAG
AACAATGAAAGAACAAGTAAGCATTGTTTGAAACCTTAAAACCTTGAAGC
TACTTTACTCAGCCGTTACTTAACAGTCTAGTCAAATtccgaaaagaaaa
cttttttcatccTTTTTGATCAAGGAAAAACGGGTCAAAGCTATAAAAAA
GTTCCCTTTTCGGAACTAAAAAACAGTTCCGTTTTTGGAATTCGACTAAA
CTGctcgacgttgtttcaacgttcatgtaACATCCCTAACGTCTCGTTAA
AGTTTGATGAGCTTTGAAACAATGCTGTGTGCTAAGTGGGTAAAATTCTA
AATTTCACCAAATTCCCATTGACCTCTCTTATTTAAATCTTTttagtctt
caaaaaaaaaattagagtacCAAAAGTGACTATGACTGGCACTTTTCTAC
CGCAACTATTCTAAAAACGACACCCCTACTTAGGGTAATCGAAAAGCGAA
AGGAAAAATATACCttaacaattttaaaatttatacaTTTTCTAAGGCAG
GAGGCATGTTTGGACGATAAGCGTCGTTTTCTTACCTTCCCAAGTCTATT
CAAGGGTtacaaaatcagaaaattttaaagtagtctatatttttttgttt
ccagAAAAAAAGGGTCAGGAATCTTTCGGAAATCGAAggaaattgttcaa
aaatgtcttattttttcatgaaaatctctctaagggttggttttGAGAGA
CCTTGTCAACGCATAACTCTCTCCCGGGTTTAAGAGTTGTAATCTTGACT
CTCTAACTTAAACTCCTTAGATTTTGAATGGTCGTGACAAAGGATCAGCC
GTATATGAAGGACCATTCTTGTCATGGCAAAACTACCACGATTGGCTTAT
CAACTTTGCATGCAGATGTGGTCAAAAGGTTGCTGCCCGTGGAGGATCCA
TCTTTTCACTACAATTTTTCGGTTAGTATtacaaaaatatgtacttaAAA
TCGTACCAATCGTACCAATTTGACACAAAAATGTCATATTCcctaatacc
ttatcggccaaaacttagtcggccctaagtgactaaattttggcttggtg
actgaaatttgggcCGACCAAAAATTTGGgacaaattaaaagtttataat
taagctttccttaaccAACTTTTTTGAATACCACATCATTACGTCCGCTA
CAATTCATTATTTCGTCCGCTATTATTCATTATATATTAGTCGTCCCTTA
GTGACTAAATTTTGACGAGGTGACTAAAATTAGGGCCGactaataattaa
ggccgactaaaattaagaccgactaagttttggccgataaggtatttaga
GTTCAGTGCAGAACTTATGGTTTTCCTTGGTATTTTCAACTTGCTGTCTT
AGATGGAATTTTGAGTCTGTTTAAAAGAACTATGACGTTCTCAAACAAAC
TAGGCTAAATATTTTCCTTAGTTGACCTGTATTATCAGCTTCATAGTTCG
AATCACAATCTACTCGTCTAAATAAATGTTTATACAACTATTGGTTTGAG
CCATAAatctgaaatgaaatttttacaccgctattgacaACAAATTTCCA
CAAATTTTCAGGTGAATGTTGGACAGACTTCCCAAAGGGAAAAGGCAAAG
TTGAATACGCCAAACATGGATTATCTAACGGATGTTATGCCAGTAACTTC
GATAAATACACTGGATCTCCAGTACAAACCAAATGGTATACCGGTGATCA
GAAAACAAACTTCGTCTACAGAGCTATCCCTATCGTCAAATGTAAGTTCT
TGACAATATGTTATTTCCAGTTagaacacaacgttgttttaacgttattt
gaacgttaaggATGTCATGACGTTtctgacacccctgtgtcacagaccca
ctgggaccccagccacactggaaaatttggcaataaTTTCGTCCACgctg
ggaaaataccctggaatttcagccccacttggaaaatgattttgatttca
tccccatttgaaattcactgtttaaaaattgcactccaataCCATCCCCA
ttgggttttttaaccttggaacaatagaatttctatccctatCGGCATTT
TAATAGGAACTTTTATCCCCAccgaggaaaaaagttccagtggggctgtg
agaTAGGGGTACTTTCTGTGGTAGCTGGGTTGGAATAAAAGTTACAGCCT
ACACGATTTCCAACAGTAACACAACTCAATTACACAAACCAACATCAACT
AAGAGACAGCTGAATTCCTGGAGTCCTGCCAATTTTGATAGTGAATTAAA
GTCGGCAGCAAGCTAGCTGTCTAAAGTAAAGTAAAGAATCGTAGGGGGCA
AGCCTGGGGTTCcatgacatcttttttacgacctaaccatttttagtctg
tttcaaagaacagtatattacaagatatttttgagagggaggacgcagAT
TAGGCCCggtaaaactttttatgaccaaaatagtaaAGCCATAGGCAAAA
ccgcaagggaaaataaggggtaggaataaatagctgattttcaaaattca
aaataaacgaaaatgtttggtaccatctgaaagagcatgaaattctgagc
aaaaaaatgtattacaacaactctgactaaaacacacaaagaaatacagc
cgcttgaagttcaaaaacataccgacgtcagtaagatcaagacaagattt
gacgtcaaatcagtagagctgacagttaggtggtcttaaagcggctgtat
ttctttgtgtgttttagtcagagagttgttgtaatacattttttgctcag
aattccatgctctttcagatggtaccaatcattttctaGAATAGAACTAA
TAAATTTCTGACTCTAACTATTAGAATAGGTCTTCTGAAGTgaccatgaa
aatattttttgcttgtcATGCGTGCATTCGTGTTTtgcgtgcctttgaaa
aaaaattcgtgtctttcgaaaaaaaatcacactcgTCTAAACTAGAACTA
AAATCAAACTCTCAGTACTTTTCGAGAGAATTATGGAGACTTTAGCCATC
TCTATAAAGATGTTGAGTTCAATCTAAAATATCATCTTTTTCCATAATCG
TAGCAACTACCCCACCACCAACAGAAGCGGTTCCAACACCCGCTAACGCA
CAAACAAAGCCAGCACCAACCGCTAAAACTCTACCACCACCTCCACCAAC
CGCTGAAACTCCACCACCTACACCACCAACAGCTAAAACTCCACCACCAC
CTACACCACCAACCGCTAAAACTCTACCACCACCCACACTACCAACTGAA
CCAAAAACAGTAAAACCACCCACCAAACCAGCTACTTGCAAGCCAGCTCA
TGTTCTCAAAATGTTTCATGCTTACACAAAGAAAACTCTACAAAAGACAT
GGTTTATGCGATTCCAAATCATGCCTACAGGAATCGTTAGCAGAAAATAC
GCCAGTATTGTCCACGTGACAACTAATCACAACATCAAACACTACGGTAG
CCGAGTTCCAGGAATCTGGTTCCGACCAAACAGCAACAGCCTTCATATCT
GTTCTGCAGTCAACGGCAACAAAAACTTTTGCTATAACAGTAAACCCCTT
GCACAAGGAAAATACACCACCGTTTTGGTTCGACAGGTAAAGCTAGTTTT
ATattattacacgcttttttataagagtacaCGTGGCTCAATTTCGGccg
aaaacgttaaaacaaaTAAAGCAAGATTTCCACTTCTGATATCTGAGATG
GCTTACGTTTAGGCCCTTTTAAATCAATGAGTGAACAAATTaagcatatt
aagaacattttcagaacattttagcttgaaatCACGAAAATTAAGATGAG
TCGACTAAACTAAAACTTACTAACGTTCTAATATTATAAAAATCATGTAA
AATAACTTTCAACTTCAATCACTAGTAGATTTTTCGAATTTGGTCGTGAT
GGTAATTctcttcaaaaaaacttttctcaaaGGCTTTTTTACGGTTTGac
attcaaatttaaagttttgataTCGGTATCTTTTATAATCAGGTGAAACA
AGTAAAAGGAAACAAATATCTTTATCAAATCTACATCAACGGACGCAGAG
TTATgaataaaatcaacaaagacCCAAGAGTCTTTAAAAACGTTAAACTT
TACCGAAGTGACCCGTGGTACCCAGCCACTAAAGCTTGCgtcaaaagttt
catttttggTAACATCCGCAATAGAAACCcacaaggtaaatacaaattct
GAATTGGCCTTTGGTAAAATTAGGGtcgtttaaagggacataaaagtagt
aaaatgtaaacatttcgggaaccacgtgtcattaaagagaacaattaaaa
tcacgtgtccaaacaaacttgtaaaacaattgaaacaaacaaaattagcc
atgtttgtgtttgtttttttcaattttgacatgtgacatttgttttgatt
ttgtatcccgctgcatacggtttgtttacaaattacatcagtacttttat
gtccctcaTCTAAATAGTACATTCCATAGACCAAATGTTTGGTAACTTCC
TATAGATGTTACCGAGAATGACAATACCTTTTGAACACATGAGATAACAA
TGAAAGTATTTTTAATGAGTAGTATTTTTAATGAGTATTcatttccaagg
aaaatcaaataGCTAGAAAAAAATGGTTTGGCATATAACGGGGGAGGTAA
TTTATCATTTAGTGTATCTCCTGCCATtcctttttaaacaaaagaaagaa
cgaTATTTTTCCCTTTGGGGATTCTTTTGTTTATCCTTTTTTGTCAGCAT
AGAGACTTTCTCTATCTTCAATCTTTCTTTCTATCAGCATGCCAAAACgt
taaaaaccaaattttgaaaggaCGAAAACTTCGTGTGTTACCAAAACTTC
TCAGAGGATACACCCTCAAATTCAATATCAAACCATATGGATTCATCACC
AAGAAATATGCAAGCATCTTCCATGCAACAACCGGTGGTAACGTCAGAGT
TTACGGTGACCGTACGCCTGGAATCTGGTTCCTACCAAACACAACTCGTT
TACACATCTGTTCAGCTATTGgtggaaacaaaaataaatgtttcaACACA
GCTCAACTGGACGAAGATAAATCTTACAATATTGTCGTTCGACAAGTCCA
AAAgtggaatttgaaatattatttccAAGTGTTCTTGAATGGAAGGAAGA
TTGTAGATAAATTGAACACCAaaccaaaagttttcaagaATGTACAACTA
TGGAATGGCGACAAATGGTACAGACCAGCCCAAGCTTGTATCTCAAAAAT
CTCGTTCAGAAATATCAAGCACAGAGGTATATAATGATTCTGctcatatt
tttttccaaagacAAAAAGAGGTATCACTGTatctcactaacattctgcc
gattggtagtgtgaaggtttcgatcacagacttgcaccgcaatggactgt
gttcgaatcccaagctcttccaggcagggtgttaggtAAATATGgtgact
ctctaccttcactcacaAAGACAGGTTTTAGATTAAAATTAGACACCGAG
TACATACGTACACGTTCATGTAAAAGTTCCCTTTTTGTACTTTGAGAATA
ATGTTTATATAAACACTTTTCAAGCCAAAACTCATATAACATCAGGATAA
CCAAAAAtctacttgttttttttttcaaacaaatacattataaaaatctt
aaaattaaaattgcAATGGAAATTAACTATACAGTTGACGAAGCAATATT
GATAAAGACTAACTCTCTATGAAaattgaatacaccttttcaaccgtagc
cgccaattgccgcacgGACatgttttaccaccctaaaactgtccctgtct
ttttttcgcacctaaagacaatataaaaaagtttaaaaaaagaattggat
cgagtttagggtggtaaattaaataataaggTGGCACGCGCCTGGTCGCA
CGGCTACGGTCAAAATAGGTGTATAAAATTAATATAAAAGTCAGTCTTAT
CAATGATTTATAATTTCAGCTTTCAGGAGACCAATCAAAAACAAAGCAGT
GTTGAGAAAGAAGACTTTACTACGCGGATGGACATTAACAATGCATATCA
AACCAAACGGTACAATCCCTGGATGGTCTAACATCTTACATGCTACTATT
GGCCAGAACGGCAAAAGATATGGCGATCGTACCCCAGGTGTCTGGTTCAT
CTCAAAAACCAATAAACTTCACATCTGTTCTGCAGTCAATGGACAAAGCA
ACCATTGCTTCAACAGCAAACCTTTACCAaaaaacaaatacaacaaaGTG
ATCATTCGGCAAGTACAAAAGAAAGTACCAAACAATTTCCTTAAATATTT
CTACGAAATATTCATTAATGGCAAGAGAGTTAAAAGTATTATCAACAATA
AGCCAAAAGTCTTCAAGAATGTCACCTACTACATCAGTGATCCATGGTAT
AACCCAGCCAAAGCCATCCTGAGAAGCTTGGATCTGAAAATGCACAAACA
CAAAGGTTTGGTATATTCTTTTGTTCAAAATTTAACCAGCTTTCAAACTC
ACAAAACTTTACAATAACCCTAAGTCTCCATAGACAGATAGATAGAGTCT
AGATATTCTAAAaatggatagcccagtaatctaggactgtTNAAATCACT
TTCTAGAATTCGATGGTTTGAGACCGCTTACGCCTTtaaccacttggcca
tcgctacatcacttcttgttttatttttaaaactttgaaggTACGTACGA
TTTCGAGGTACACACAAAATAATATTTCTGATCTGTATACATTCCTAACG
GCAAGTAGACTCTTCATTGTTGTTTTGGGTGAAAACGAATTTAGGTGGAA
GTGTTATAAAACATAAGACAAGTAAGATTATACTACAATGATAATAAATT
AAGAAATTACAGTTTATTTTGACCTTATTTCTTAATCCTTTAGAATCGTA
CGCGGTTAGAAAGAAGCGCGTTATCATGCgaagaaagaaattattgaGAG
GGTGGACTTTGTCAATGAGCATTAAACCAACTGGTACAGTCAGTGGAtgg
tcaaacattttccacgCCACAATCGGGCAGAATGTCAAGCGTTATGGCGA
CAGAGTCCCTGGCATCTGGTTCAAATCAAAGACAAACCAGCTCCATATCT
GTTNACCAACTGGTACAGTTAGTGGGtggtcaaacattttccacgCCACA
ATCGGGCAGAATGTCAAGCGTTATGGCGACAGAGTCCCTGGCATCTGGTT
CAAATCAAAGACAAACCAGCTCCATATCTGTTCAGCAGTCAGCGGAAAAG
TTAACCACTGTTTTGACAGCAAAGCTTTACCAAAGAACAAATTCACACAA
TTGATGGTTCGGCAAATACAAAAGGATAACAATAAATATTATTACCAAAT
TTTCATCAACAACAAAAGAGTTCATAGTGTTGTGAACACAAAACCACAAG
TTTTCAAGAATGTCATATTTTACGCAGCTGATCCTTGGTACAACCCCGCA
AAAGCTCAACTCCGAAAAGTTAATTTCGTCATGCACAAACATCACAGTAA
GTTTTGTAATatttcttttgaagaaaaaaaaaacaaatacctCTAATCTT
AACTTTTATTCTCAGTTATTTTTcgaatacacgtcttttttatataagaa
caaactatataagaacataaggcttcgatgaccaaaatatccATAACAGG
TTAAGAATATTGGAAGGTTTTTCAAGGTCTAAAAcaatcaatttcatttt
aggaaaatggataaCAATCCTcccaaaatagtgaaaataagggtctttta
ggcttaaaaatcaaagGATTAGatcatccgaaggcttcaaaattaaaaaa
aattcttataaaagcaaacgTGTATCAAGAACTCTAAATCCGAAACGAGT
TtctaaattgaattttttatttcctcAACTGCAGATCACCGAGGtatcaa
gaaaaacactttaTTGAGGACAGAGAAAAATTTAAAGAGAGGATGGACAC
TGAGCTTCGGACTCAAACCAACCGGAGTTAGCAATGGATGGGCTAATATC
TTGCATGCAACAATTGGTAAAAACCTTGGACGCCACGGAGACCGAGTTCC
AGGAGTTTGGTTCAGATCAAAAACCAACAAACTTCACATCTGTTCAACCA
TCAATTCAAATAAAAACCATTGTTACGATAGCGTTAATTTGCCAAGACAC
AAATACTCCAGAATTATCATCCGACAGGTACAATTGAAAAGACCAAACAa
cttcttgaaatatttctatcaaattttcatcaatggtaaaaaagtgaaag
aagTTTTGAACAAGAAGCCGAAGATTTTCAAACAGGTCAAATATTATGGC
AGTAATCCTTTCGGACAAGCTGCAAAGGGAATACTAAGAAATGTCAAATT
AGTCCAACACAAACACCAAGGTGAGAATCTTCTTTATGTAGCTAATTTGA
TTTTGTGCGAATACAGTTGactttcgctaattcgaacttctattatagga
atctttctataattcaaactcgttctcagtccccgtcaagggaAAACCCT
TGTAAATCACTTTCTAGAATTCGATGGTTTGAGACCGCTTACGCCTTtaa
ccacttggccatcgctacatcacttcttgttttatttttaaaactttgaa
ggTACGTACGATTTCGAGGTACACACAAAATAATATTTCTGATCTGTATA
CATTCCTAACGGCAAGTAGACTCTTCATTGTTGTTTTGGGTGAAAACGAA
TTTAGGTGGAAGTGTTATAAAACATAAGACAAGTAAGATTATACTACAAT
GATAATAAATTAAGAAATTACAGTTTATTTTGACCTTATTTCTTAATCCT
TTAGAATCGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAAAGGTTCTTATCAAAGCAAACGTGTATCAACTCTA
AATCCGATTCGAGTTTCTagaatgaattttttatttacttaactGCAGGT
CACCGAGCtatcaagaaaaacactttaTTGAGGACAGAGAAAACTTTAAA
GAGAGGATGGACACTGAGCTTCGGACTCAAACCAACCGGAGTTAGCAATG
GATGGGCTAACATCTTGCATGCAACAATTGGTAAAAACCTTGGACGCCAC
GGAGACCGAGTTCCAGGAGTTTGGTTCAGATCAAAAACCAACAAACTTCA
CATCTGTTCAACCATCAATTCAAATAAAAACCATTGTTACGACAGCGGTA
ATTTGCCAAGACACAAATACTCCAGAATTATCATCCGACAGGTACAATTG
AAAAGACCAAACAacttcttgaaatatttctatcaaattttcatcaatgg
taaaaaagtgaaagaagTTTTGAACAAGAAGCCGAAGATTTTCAAACAGG
TCAAATATTATGGCAGTAATCCTTTCGGACAAGCTGCAAAGGGAATACTA
AGAAATGTCAAATTAGTCCAACACAAACACCAAGGTGAGAATCTTCTTTA
TGTAGCTAATTTGATTTTGTGCGAATACAGTTGactttcgctaattcgaa
cttctattataggaatctttctataattcaaactcgttctcagtccccgt
caagggaAAACCCTTGTAAATCACTTTCTAGAATTCGATGGTTTGAGACC
GCTTACGCCTTtaaccacttggccatcgctacatcacttcttgttttatt
tttaaaactttgaaggTACGTACGATTTCGAGGTACACACAAAATAATAT
TTCTGATCTGTATACATTCCTAACGGCAAGTAGACTCTTCATTGTTGTTT
TGGGTGAAAACGAATTTAGGTGGAAGTGTTATAAAACATAAGACAAGTAA
GATTATACTACAATGATAATAAATTAAGAAATTACAGTTTATTTTGACCT
TATTTCTTAATCCTTTAGAATCGTACGCGGTTAGAAAGAAGCGCGTTATC
ATGCgaagaaagaaattattgaGAGGGTGGACTTTGTCAATGAGCATTAA
ACCAACTGGTACAGTTAGTGGGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013806XLOC_013806Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024579-exon-sc0000504-1491911889:45906..45977TCONS_00024579-exon-sc0000504-1491911889:45906..45977Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:45906..45977TCONS_00024579-exon-sc0000504-1510915933:45906..45977Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:45906..45977TCONS_00024579-exon-sc0000504-1575043694:45906..45977Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:47153..47271TCONS_00024579-exon-sc0000504-1491911889:47153..47271Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:47153..47271TCONS_00024579-exon-sc0000504-1510915933:47153..47271Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:47153..47271TCONS_00024579-exon-sc0000504-1575043694:47153..47271Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:47936..48021TCONS_00024579-exon-sc0000504-1491911889:47936..48021Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:47936..48021TCONS_00024579-exon-sc0000504-1510915933:47936..48021Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:47936..48021TCONS_00024579-exon-sc0000504-1575043694:47936..48021Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:48776..48926TCONS_00024579-exon-sc0000504-1491911889:48776..48926Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:48776..48926TCONS_00024579-exon-sc0000504-1510915933:48776..48926Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:48776..48926TCONS_00024579-exon-sc0000504-1575043694:48776..48926Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:49567..49746TCONS_00024579-exon-sc0000504-1491911889:49567..49746Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:49567..49746TCONS_00024579-exon-sc0000504-1510915933:49567..49746Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:49567..49746TCONS_00024579-exon-sc0000504-1575043694:49567..49746Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:51059..51591TCONS_00024579-exon-sc0000504-1491911889:51059..51591Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:51059..51591TCONS_00024579-exon-sc0000504-1510915933:51059..51591Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:51059..51591TCONS_00024579-exon-sc0000504-1575043694:51059..51591Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:51998..52190TCONS_00024579-exon-sc0000504-1491911889:51998..52190Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:51998..52190TCONS_00024579-exon-sc0000504-1510915933:51998..52190Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:51998..52190TCONS_00024579-exon-sc0000504-1575043694:51998..52190Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:52793..53281TCONS_00024579-exon-sc0000504-1491911889:52793..53281Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:52793..53281TCONS_00024579-exon-sc0000504-1510915933:52793..53281Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:52793..53281TCONS_00024579-exon-sc0000504-1575043694:52793..53281Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:53975..54460TCONS_00024579-exon-sc0000504-1491911889:53975..54460Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:53975..54460TCONS_00024579-exon-sc0000504-1510915933:53975..54460Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:53975..54460TCONS_00024579-exon-sc0000504-1575043694:53975..54460Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1491911889:58924..59030TCONS_00024579-exon-sc0000504-1491911889:58924..59030Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1510915933:58924..59030TCONS_00024579-exon-sc0000504-1510915933:58924..59030Clytia hemisphaericaexon
TCONS_00024579-exon-sc0000504-1575043694:58924..59030TCONS_00024579-exon-sc0000504-1575043694:58924..59030Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000504supercontigsc0000504:45906..59030 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0629147	0	0	0.249053	0	0	0	0	0	0	0	0	0.0120071	0.00912797	0	0.0314808	0	0	0.107289	0.0155423	0.0355551	0	0	0.000491413	0	1.89874e-06	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024579 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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