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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024518 ID=TCONS_00024518|Name=TCONS_00024518|organism=Clytia hemisphaerica|type=transcript|length=3302bp
atttttttatttgacgctagatttcgaccaatcaaaagctttcaaaataa
aaacattggatGAGATGTTGAGttcagaaaatattgaaaaagccGGTATA
CAGACACAGGAGTACATTTGTTGTCGAGATACTCGAGAAGACGCTAGAAG
TGtctgaagaaaatttttaaagtatattcttGTTTAGAAATATACTGTAT
CATCACAATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCA
GTTCAAAGTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTT
GTACTGTCAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAA
AGATGGATCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGAC
ATTGCCGTGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCAC
GAAAACGTCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAAT
TGACGATCCAacccttgaaaattttaaagatttagaTTCTGTTTATGTTG
TTGAAGAATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGA
AAACTTTCACTGGACActacaaaattgtttttatatcaACTTTTAAGAGG
ATTGAAATATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAG
GAAATTTATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTAC
GGACTTGCAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAAC
TGCTGTTGTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATT
TGGGTGACTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTT
GCTGAAATGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGA
TCAACTCAATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCC
TCACAGAAACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCA
GAAGCAATCGATTTGCTCTCTCGAATGTTATGTCTCGACCCTGATGAACG
AATTACAATTACTGAAGCATTACAACACCCCTTCTTATCCGAATTACACG
ATCCAATCGATGAACCAATTTGCGAATACCCGTTTCAAATCGAACACGAA
ATCGATAATCTACCCGTCAAAATCTTAAAACGTAAAATTCTTCGAAATTC
CTGCGTCAGCTCTTACGAAAAGAAATCGTACCATTCGTCAGAGGAAAACC
TTTTTAAAGACTTTGACGAGACCTTCTCATGTTATTGTCCAACTGAATCA
GTTAGCCGTAGGAACAGTAAAAATACACGCAATCGTTTGAGTGTCGTTAC
AAAGTTCAATTCACATGGTGAAGAGATGTGGAGTTCGAACACAAATTCAT
CGGTCGAATCTCCTACTCATGATTATAAAAGATACCAAGAAGATCTCCCA
AAAATTACATCTGAAAGCGAAGTCTTTTTACCATCCTTACAAGACGCGAT
GAGTTCTTGTCAAGTCCTGATCGACGAACCGTTCCGTGATCCAGGAGTCT
GTTCCCGTATGTACCACGAGGATGATTCGGCTCCCGTGAAAAGCAACCAA
TTTTTATCCGCGGACACTTCAAACGACTTTTCATATTTCTCAGACTTATC
ACCTGTGATTGATCTGAGTGAACCGTGTTACAATTTAAACGAAAAGAAGA
AAGACTTGAATAATAATAATGGTAGCAATAACACCAAAGTTAGCAATAAT
AATAAAATGGAAACGGCTCCTTTTTTAGGGGACCATGGACGCTCCAGCGC
CATCAGTATCGAAAGTAAAAAATCTCCGTCCTTGAAAAAGGTACGTGAGA
CCACTGTTAAAAATGGTCACACTTCAACTTTCACTGAAATTAAATTTGAA
AGTTCAACACCGACAAACTGTAAAAGTATTGACGAATTACGGGATTTGAA
TAGTGAGATTTTGCGCACGCTCAATGAACGTCACACGGCCTCGAAATGTA
ATTTTCAAGCCATGATTACGGACAGATTGTCAAATTCCTCGAAACATTTT
TCGCATTGGGATTCTTTGAAATTATGGATTTGAGATTAATGGATGGATAT
GTTACTGTAGTGGCTtcataaaatgattttttagataAATTTAGTACCTA
TTTTTGTTTGACCTTTTTtggattaaaatttttttaaatcgtttagtttt
ttctgaaattgttttttttataagagaatTGTTATATTGTACATGTACAG
AGATGTTTGCTTATGTTTTTTTGTACAGAAATCTCTAGAATTACGTTCTC
AGCTGAAATCTTaatttaaatatataaaaaatatctatttatttattatt
tgtaTCATATTGTATATCTTTTTTCCTTCGCCCCAAAGTTTTGACAAATC
TATGTAAATATAAACAttgatgaaatttaatttatacAAGATAtaaagaa
taacaaaaaaatattgaattgttatatttttcaatgttGACAACTTTTGA
TAATACTTTATCGCTTTGAccaaagatttttttctatATAGTTATTTTGc
agttgtttttgtttatcctgcctagttcttttgtttattttttatgactg
tttGATTTAACCTTTTCTtgttttcagcaaaaattttagccACTAAGTGG
GACCATATAGCCCACACCGAAATTCGTACAAAACTGTCAAAATGCACTGT
TACAAAAATCTAATCCTTCAAAAAATCACGATTTCTAAGTctccttattt
ttattttcttttgtgcCAAAGTCCAAAGTCCACATTATGTTTTTACAAAA
CATGTCCAAAACCGGTTAGCTTGAGATTGTACTTTCAATATTGAATTACG
CTATCAAAATACAACTGGGTCATTTAACCCAACCTTTGCAATTTTTTCCT
TCTACATTATGTCAAAGATTAAGGTTGTCAAacttagaaactttttttta
ttatattttaaaaacgttttgaactttaaaaaaagtatattataataatt
tatgaaactacaaaaaaagtttgttagaACTTTGAAAcagaattttatta
aattattacaGTACCTctttaaaataataatattttataagTTTTCAAAC
TTTAGCAACAGAATTTTAATAATATCATAGGAGATAATGTTATAAGATAC
CTTTTTAGTGGAATTGAGATCTTTTTTCggcaaataaaattttattaaat
tgccGCTGgttataaaataatatttaaaggaaagaaaatagtgaaaaagt
ac Run BLAST on NCBI protein sequence of TCONS_00024518-protein >TCONS_00024518-protein ID=TCONS_00024518-protein|Name=TCONS_00024518-protein|organism=Clytia hemisphaerica|type=polypeptide|length=641bp
MPGNCEQFNTLSSLSSKFSDLKVIAGGGSGVVLSGVDKSLSESSLPDKDG
SQVALKRLSLVGKGHCRVALRELRLLNRFVHENVVKTYKITDSNGSTIDD
PTLENFKDLDSVYVVEELLDTDLHKVIERNGKLSLDTTKLFLYQLLRGLK
YIHSANVIHRDIKPGNLFVNLDDLTLKIGDYGLARVFDNRYEHKGYLTAV
VSTRYYRAPEVMKNLGDYSYPIDMWSCGCVFAEMLSGKILFSGENDLDQL
NVICSAYGVTPDNLLTETSSFPEHLFVGLPPEAIDLLSRMLCLDPDERIT
ITEALQHPFLSELHDPIDEPICEYPFQIEHEIDNLPVKILKRKILRNSCV
SSYEKKSYHSSEENLFKDFDETFSCYCPTESVSRRNSKNTRNRLSVVTKF
NSHGEEMWSSNTNSSVESPTHDYKRYQEDLPKITSESEVFLPSLQDAMSS
CQVLIDEPFRDPGVCSRMYHEDDSAPVKSNQFLSADTSNDFSYFSDLSPV
IDLSEPCYNLNEKKKDLNNNNGSNNTKVSNNNKMETAPFLGDHGRSSAIS
IESKKSPSLKKVRETTVKNGHTSTFTEIKFESSTPTNCKSIDELRDLNSE
ILRTLNERHTASKCNFQAMITDRLSNSSKHFSHWDSLKLWI Run BLAST on NCBI transcript from alignment at sc0000501:177831..182351- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024518 ID=TCONS_00024518|Name=TCONS_00024518|organism=Clytia hemisphaerica|type=transcript|length=4521bp|location=Sequence derived from alignment at sc0000501:177831..182351- (Clytia hemisphaerica)
ATTTTTTTATTTGACGCTAGATTTCGACCAATCAAAAGCTTTCAAAATAA
AAACATTGGATGAGATGTTGAGTTCAGAAAATATTGAAAAAGCCGGTATA
CAGACACAGGAGTACATTTGTTGTCGAGATACTCGAGAAGACGCTAGAAG
TGTCTGAAGAAAATTTTTAAAGTATATTCTTGTTTAGAAATATACTGTAT
CATCACAATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCA
GTTCAAAGTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTT
GTACTGTCAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAA
AGATGGATCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGAC
ATTGCCGTGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCAC
GAAAACGTCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAAT
TGACGATCCAACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTG
TTGAAGAATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGA
AAACTTTCACTGGACACTACAAAATTGTTTTTATATCAACTTTTAAGAGG
ATTGAAATATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAG
GAAATTTATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTAC
GGACTTGCAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAAC
TGCTGTTGTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATT
TGGGTGACTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTT
GCTGAAATGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGA
TCAACTCAATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCC
TCACAGAAACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCA
GAAGGTAATAAATTATTTTACTTTAGTTGATTTTAATTCATTGCACAATG
TGTGTAGCCGGTTTCAAATGCATTTATTATGGACATTTCGAAATTCTGAA
AATGTCGTGATTAAATTTTTAAACACAGCCATATTTTCTTTTCTCAACTT
TTTTCAGCGTTCATTCATTTTGTTTGTATAGCATTTCAATAAAATTTTGA
AAGTTATTGTTTCTCTGAACCCAAAAATATCTCATCCTCTGAATTTTTTA
AGAGTTTGTGCTGAATGTTTTATAAAAAGCTCATTCATGAAAAATCCATT
AATTTAGAAATCCAGATGAGTAAAAATAATTTTTTTCTAAATTTGAACTG
AAACATTTCTAAATCTCGTAAAAAGTTATACAAAATTTATCAATACGTAG
GTATTGATCCCCTCCTATGAAACTGTTTTTATTTGACACAGATCAAGATA
TGAAAAAATCTTTTTTCTCTCTTTCTCTCAAAAAAAAAATTGAGAAAAAT
TCTCTCGTCTGGTCAAGGTCCAGTTGAGAGGGTGATTCCCTGACTTTTAA
TTATTATCATCCTGTCGCGTTTTTTATCTTTCTTTGTTCCTTCAATGTTT
AAATTACAGAACAACCGAACAGAATCTAGAAAGGATATGAAATTATTAAA
AAACCAGCTGTTTAGGCTTATCAATGTTCGAGTTTTCTAGAAAAGAATAT
ACACCTGGAAATACATGAGAAAAAAAGGAAAAAAAAGAGAAAAATTTTCA
GCCTTCCGAAGATGGGATGAAAAAGAAAAAAAAAGTTTGATAAAGTAAAG
AAAAAATGTTTTCATTATACAAAAAGAAAAAATGATGAGAAAAGAAACCA
TGACTCAGACTTAGTAAGTGAAAACCACTGTTTTGGAGAGAGAGCTTAGT
CATAACTTTCATAACCTAGTTTCTAAGCCGCCTTTCTCACTCTATCTGTT
TGAGATGATATCAATATATCTTTATAGCTTAGAAGAAAAGCTTTAATTTC
CTTGACATCCGGCTACACAAATTCATACATTGTTGTTTGGTCAACTCAGT
AATTGAATCCTTTTCGAAAAAAAACGTTATTAACCCGTTAGTAATCCGTT
TTTGTTTAGAGACAAAAACAGATAAGGATTTTCACAAGCCCACCACCCAA
GACATAACATAAGAAATTTTAATAAAGCTGTTATATTTTGACTCATCATT
TTCTCATTTTTTTATCTTTACAGCAATCGATTTGCTCTCTCGAATGTTAT
GTCTCGACCCTGATGAACGAATTACAATTACTGAAGCATTACAACACCCC
TTCTTATCCGAATTACACGATCCAATCGATGAACCAATTTGCGAATACCC
GTTTCAAATCGAACACGAAATCGATAATCTACCCGTCAAAATCTTAAAAC
GTAAAATTCTTCGAAATTCCTGCGTCAGCTCTTACGAAAAGAAATCGTAC
CATTCGTCAGAGGAAAACCTTTTTAAAGACTTTGACGAGACCTTCTCATG
TTATTGTCCAACTGAATCAGTTAGCCGTAGGAACAGTAAAAATACACGCA
ATCGTTTGAGTGTCGTTACAAAGTTCAATTCACATGGTGAAGAGATGTGG
AGTTCGAACACAAATTCATCGGTCGAATCTCCTACTCATGATTATAAAAG
ATACCAAGAAGATCTCCCAAAAATTACATCTGAAAGCGAAGTCTTTTTAC
CATCCTTACAAGACGCGATGAGTTCTTGTCAAGTCCTGATCGACGAACCG
TTCCGTGATCCAGGAGTCTGTTCCCGTATGTACCACGAGGATGATTCGGC
TCCCGTGAAAAGCAACCAATTTTTATCCGCGGACACTTCAAACGACTTTT
CATATTTCTCAGACTTATCACCTGTGATTGATCTGAGTGAACCGTGTTAC
AATTTAAACGAAAAGAAGAAAGACTTGAATAATAATAATGGTAGCAATAA
CACCAAAGTTAGCAATAATAATAAAATGGAAACGGCTCCTTTTTTAGGGG
ACCATGGACGCTCCAGCGCCATCAGTATCGAAAGTAAAAAATCTCCGTCC
TTGAAAAAGGTACGTGAGACCACTGTTAAAAATGGTCACACTTCAACTTT
CACTGAAATTAAATTTGAAAGTTCAACACCGACAAACTGTAAAAGTATTG
ACGAATTACGGGATTTGAATAGTGAGATTTTGCGCACGCTCAATGAACGT
CACACGGCCTCGAAATGTAATTTTCAAGCCATGATTACGGACAGATTGTC
AAATTCCTCGAAACATTTTTCGCATTGGGATTCTTTGAAATTATGGATTT
GAGATTAATGGATGGATATGTTACTGTAGTGGCTTCATAAAATGATTTTT
TAGATAAATTTAGTACCTATTTTTGTTTGACCTTTTTTGGATTAAAATTT
TTTTAAATCGTTTAGTTTTTTCTGAAATTGTTTTTTTTATAAGAGAATTG
TTATATTGTACATGTACAGAGATGTTTGCTTATGTTTTTTTGTACAGAAA
TCTCTAGAATTACGTTCTCAGCTGAAATCTTAATTTAAATATATAAAAAA
TATCTATTTATTTATTATTTGTATCATATTGTATATCTTTTTTCCTTCGC
CCCAAAGTTTTGACAAATCTATGTAAATATAAACATTGATGAAATTTAAT
TTATACAAGATATAAAGAATAACAAAAAAATATTGAATTGTTATATTTTT
CAATGTTGACAACTTTTGATAATACTTTATCGCTTTGACCAAAGATTTTT
TTCTATATAGTTATTTTGCAGTTGTTTTTGTTTATCCTGCCTAGTTCTTT
TGTTTATTTTTTATGACTGTTTGATTTAACCTTTTCTTGTTTTCAGCAAA
AATTTTAGCCACTAAGTGGGACCATATAGCCCACACCGAAATTCGTACAA
AACTGTCAAAATGCACTGTTACAAAAATCTAATCCTTCAAAAAATCACGA
TTTCTAAGTCTCCTTATTTTTATTTTCTTTTGTGCCAAAGTCCAAAGTCC
ACATTATGTTTTTACAAAACATGTCCAAAACCGGTTAGCTTGAGATTGTA
CTTTCAATATTGAATTACGCTATCAAAATACAACTGGGTCATTTAACCCA
ACCTTTGCAATTTTTTCCTTCTACATTATGTCAAAGATTAAGGTTGTCAA
ACTTAGAAACTTTTTTTTATTATATTTTAAAAACGTTTTGAACTTTAAAA
AAAGTATATTATAATAATTTATGAAACTACAAAAAAAGTTTGTTAGAACT
TTGAAACAGAATTTTATTAAATTATTACAGTACCTCTTTAAAATAATAAT
ATTTTATAAGTTTTCAAACTTTAGCAACAGAATTTTAATAATATCATAGG
AGATAATGTTATAAGATACCTTTTTAGTGGAATTGAGATCTTTTTTCGGC
AAATAAAATTTTATTAAATTGCCGCTGGTTATAAAATAATATTTAAAGGA
AAGAAAATAGTGAAAAAGTAC Coding sequence (CDS) from alignment at sc0000501:177831..182351- >TCONS_00024518 ID=TCONS_00024518|Name=TCONS_00024518|organism=Clytia hemisphaerica|type=CDS|length=3852bp|location=Sequence derived from alignment at sc0000501:177831..182351- (Clytia hemisphaerica)
CAATCGATTTGCTCTCTCGAATGTTATGTCTCGACCCTGATGAACGAATT
ACAATTACTGAAGCATTACAACACCCCTTCTTATCCGAATTACACGATCC
AATCGATGAACCAATTTGCGAATACCCGTTTCAAATCGAACACGAAATCG
ATAATCTACCCGTCAAAATCTTAAAACGTAAAATTCTTCGAAATTCCTGC
GTCAGCTCTTACGAAAAGAAATCGTACCATTCGTCAGAGGAAAACCTTTT
TAAAGACTTTGACGAGACCTTCTCATGTTATTGTCCAACTGAATCAGTTA
GCCGTAGGAACAGTAAAAATACACGCAATCGTTTGAGTGTCGTTACAAAG
TTCAATTCACATGGTGAAGAGATGTGGAGTTCGAACACAAATTCATCGGT
CGAATCTCCTACTCATGATTATAAAAGATACCAAGAAGATCTCCCAAAAA
TTACATCTGAAAGCGAAGTCTTTTTACCATCCTTACAAGACGCGATGAGT
TCTTGTCAAGTCCTGATCGACGAACCGTTCCGTGATCCAGGAGTCTGTTC
CCGTATGTACCACGAGGATGATTCGGCTCCCGTGAAAAGCAACCAATTTT
TATCCGCGGACACTTCAAACGACTTTTCATATTTCTCAGACTTATCACCT
GTGATTGATCTGAGTGAACCGTGTTACAATTTAAACGAAAAGAAGAAAGA
CTTGAATAATAATAATGGTAGCAATAACACCAAAGTTAGCAATAATAATA
AAATGGAAACGGCTCCTTTTTTAGGGGACCATGGACGCTCCAGCGCCATC
AGTATCGAAAGTAAAAAATCTCCGTCCTTGAAAAAGGTACGTGAGACCAC
TGTTAAAAATGGTCACACTTCAACTTTCACTGAAATTAAATTTGAAAGTT
CAACACCGACAAACTGTAAAAGTATTGACGAATTACGGGATTTGAATAGT
GAGATTTTGCGCACGCTCAATGAACGTCACACGGCCTCGAAATGTAATTT
TCAAGCCATGATTACGGACAGATTGTCAAATTCCTCGAAACATTTTTCGC
ATTGGGATTCTTTGAAATTATGGATTTGAATGCCTGGAAATTGTGAGCAG
TTTAATACTTTGAGCTCTCTCAGTTCAAAGTTTTCAGATTTAAAAGTTAT
TGCTGGTGGTGGCAGTGGAGTTGTACTGTCAGGAGTTGATAAATCACTTT
CAGAAAGCTCGTTACCCGACAAAGATGGATCACAAGTTGCATTAAAAAGA
CTTTCCTTGGTTGGCAAAGGACATTGCCGTGTCGCCTTACGAGAACTACG
TTTATTAAATCGATTCGTTCACGAAAACGTCGTAAAAACATACAAAATTA
CAGACTCAAACGGATCAACAATTGACGATCCAACCCTTGAAAATTTTAAA
GATTTAGATTCTGTTTATGTTGTTGAAGAATTACTCGATACAGACTTGCA
TAAAGTTATCGAAAGAAATGGAAAACTTTCACTGGACACTACAAAATTGT
TTTTATATCAACTTTTAAGAGGATTGAAATATATTCACTCTGCAAATGTT
ATCCACAGAGACATTAAACCAGGAAATTTATTCGTAAACTTGGACGATTT
AACTTTAAAAATTGGCGATTACGGACTTGCAAGAGTTTTTGATAATCGAT
ACGAACACAAAGGATATTTAACTGCTGTTGTTTCTACGAGGTATTACAGA
GCACCAGAAGTAATGAAAAATTTGGGTGACTACAGCTATCCTATTGATAT
GTGGAGCTGTGGCTGTGTATTTGCTGAAATGTTATCAGGAAAGATTTTGT
TCTCTGGTGAAAATGACTTGGATCAACTCAATGTTATATGTTCAGCATAT
GGAGTTACACCCGACAATCTCCTCACAGAAACTAGCTCCTTTCCTGAACA
TCTATTTGTTGGACTTCCTCCAGAAGCAATCGATTTGCTCTCTCGAATGT
TATGTCTCGACCCTGATGAACGAATTACAATTACTGAAGCATTACAACAC
CCCTTCTTATCCGAATTACACGATCCAATCGATGAACCAATTTGCGAATA
CCCGTTTCAAATCGAACACGAAATCGATAATCTACCCGTCAAAATCTTAA
AACGTAAAATTCTTCGAAATTCCTGCGTCAGCTCTTACGAAAAGAAATCG
TACCATTCGTCAGAGGAAAACCTTTTTAAAGACTTTGACGAGACCTTCTC
ATGTTATTGTCCAACTGAATCAGTTAGCCGTAGGAACAGTAAAAATACAC
GCAATCGTTTGAGTGTCGTTACAAAGTTCAATTCACATGGTGAAGAGATG
TGGAGTTCGAACACAAATTCATCGGTCGAATCTCCTACTCATGATTATAA
AAGATACCAAGAAGATCTCCCAAAAATTACATCTGAAAGCGAAGTCTTTT
TACCATCCTTACAAGACGCGATGAGTTCTTGTCAAGTCCTGATCGACGAA
CCGTTCCGTGATCCAGGAGTCTGTTCCCGTATGTACCACGAGGATGATTC
GGCTCCCGTGAAAAGCAACCAATTTTTATCCGCGGACACTTCAAACGACT
TTTCATATTTCTCAGACTTATCACCTGTGATTGATCTGAGTGAACCGTGT
TACAATTTAAACGAAAAGAAGAAAGACTTGAATAATAATAATGGTAGCAA
TAACACCAAAGTTAGCAATAATAATAAAATGGAAACGGCTCCTTTTTTAG
GGGACCATGGACGCTCCAGCGCCATCAGTATCGAAAGTAAAAAATCTCCG
TCCTTGAAAAAGGTACGTGAGACCACTGTTAAAAATGGTCACACTTCAAC
TTTCACTGAAATTAAATTTGAAAGTTCAACACCGACAAACTGTAAAAGTA
TTGACGAATTACGGGATTTGAATAGTGAGATTTTGCGCACGCTCAATGAA
CGTCACACGGCCTCGAAATGTAATTTTCAAGCCATGATTACGGACAGATT
GTCAAATTCCTCGAAACATTTTTCGCATTGGGATTCTTTGAAATTATGGA
TTTGAATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCAGT
TCAAAGTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTTGT
ACTGTCAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAAAG
ATGGATCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGACAT
TGCCGTGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCACGA
AAACGTCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAATTG
ACGATCCAACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTGTT
GAAGAATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGAAA
ACTTTCACTGGACACTACAAAATTGTTTTTATATCAACTTTTAAGAGGAT
TGAAATATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAGGA
AATTTATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTACGG
ACTTGCAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAACTG
CTGTTGTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATTTG
GGTGACTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTTGC
TGAAATGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGATC
AACTCAATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCCTC
ACAGAAACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCAGA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024518-exon-sc0000501-1575043694:181298..182351 | TCONS_00024518-exon-sc0000501-1575043694:181298..182351 | Clytia hemisphaerica | exon |
| TCONS_00024518-exon-sc0000501-1575043694:177831..180078 | TCONS_00024518-exon-sc0000501-1575043694:177831..180078 | Clytia hemisphaerica | exon |
| TCONS_00024518-exon-sc0000501-1510915933:181298..182351 | TCONS_00024518-exon-sc0000501-1510915933:181298..182351 | Clytia hemisphaerica | exon |
| TCONS_00024518-exon-sc0000501-1510915933:177831..180078 | TCONS_00024518-exon-sc0000501-1510915933:177831..180078 | Clytia hemisphaerica | exon |
| TCONS_00024518-exon-sc0000501-1491911889:181298..182351 | TCONS_00024518-exon-sc0000501-1491911889:181298..182351 | Clytia hemisphaerica | exon |
| TCONS_00024518-exon-sc0000501-1491911889:177831..180078 | TCONS_00024518-exon-sc0000501-1491911889:177831..180078 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000501 | supercontig | sc0000501:177831..182351 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004707 | MAP kinase activity |
| GO:0005524 | ATP binding |
| GO:0004672 | protein kinase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004707 |
MAP kinase activity |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
BLAST of TCONS_00024518 vs. Swiss-Prot (Human)
Match: MK06 (Mitogen-activated protein kinase 6 OS=Homo sapiens GN=MAPK6 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.909e-74 Identity = 128/299 (42.81%), Postives = 198/299 (66.22%), Query Frame = 1
Query: 361 QVALKRLSLVGKGHCRVALRELRLLNRFVHENVVKTYKITDSNGSTIDDPTLENFKDLDSVYVVEELLDTDLHKVIERNGKLSLDTTKLFLYQLLRGLKYIHSANVIHRDIKPGNLFVNLDDLTLKIGDYGLARVFDNRYEHKGYLTAVVSTRYYRAPEVMKNLGDYSYPIDMWSCGCVFAEMLSGKILFSGENDLDQLNVICSAYGVTPD---------------NLLTETSSFPEHLFVGLPPEAIDLLSRMLCLDPDERITITEALQHPFLSELHDPIDEPICEYPFQIEHEIDNL 1212
+VA+K++ L + ALRE++++ R H+N+VK ++I +GS + D + + +L+SVY+V+E ++TDL V+E+ G L + +LF+YQLLRGLKYIHSANV+HRD+KP NLF+N +DL LKIGD+GLAR+ D Y HKG+L+ + T++YR+P ++ + +Y+ IDMW+ GC+FAEML+GK LF+G ++L+Q+ +I + V + N +TE L G+ EA+D L ++L P +R+T EAL HP++S P+DEPI +PF IE E+D++
Sbjct: 45 RVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD-DVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIEDEVDDI 341
The following BLAST results are available for this feature:
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