TCONS_00024486 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024486
Unique NameTCONS_00024486
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024486 ID=TCONS_00024486|Name=TCONS_00024486|organism=Clytia hemisphaerica|type=transcript|length=120bp
AACCTCGTCTGTGGGAATTCTTCGCATCTTGGCAGCAGGCGTCCCAGGTC
TTGGAAAGAATTGATTGATAAACAAACTTGGGAATTGGTATTCTTCAACT
AATTTACAAGATTCTCCGAA
Run BLAST on NCBI

transcript from alignment at sc0000499:108223..108342

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024486 ID=TCONS_00024486|Name=TCONS_00024486|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at sc0000499:108223..108342 (Clytia hemisphaerica)
TTCGGAGAATCTTGTAAATTAGTTGAAGAATACCAATTCCCAAGTTTGTT
TATCAATCAATTCTTTCCAAGACCTGGGACGCCTGCTGCCAAGATGCGAA
GAATTCCCACAGACGAGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013751XLOC_013751Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024486-exon-sc0000499-1491911889:108223..108342TCONS_00024486-exon-sc0000499-1491911889:108223..108342Clytia hemisphaericaexon
TCONS_00024486-exon-sc0000499-1510915933:108223..108342TCONS_00024486-exon-sc0000499-1510915933:108223..108342Clytia hemisphaericaexon
TCONS_00024486-exon-sc0000499-1575043694:108223..108342TCONS_00024486-exon-sc0000499-1575043694:108223..108342Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000499supercontigsc0000499:108223..108342 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024486 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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