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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024422 ID=TCONS_00024422|Name=TCONS_00024422|organism=Clytia hemisphaerica|type=transcript|length=948bp
NNTGCTTGAAAAATCGCCCTAGCAACAGAAAAAATCCCGTTGCTAAGGAC
TTATTTCTTCAATCTTGGCCGGAACATAGCAATGTGATACGCCAAAAGAA
AGCtttttttacgcccttttcgagcgtcaaaatgttttttcacgTGGCAT
TACGTCATccttaaaattaaagatggtagcctCAGTAGTGcaatatatca
aaacaaaccgAAAAACAGAGCTGTAAGCATGATTTTACAGAATGTTTGGC
AAGTTTCTGCAAGTTTTAGATCGAAACTTAATCTCTTTGATGGAAATGTT
TCATTTAAATGAAGAATAGACTCTAAGGAAGCTAGAAAGTTGCTGTACAT
TGGTTATGTTGTAGGATTTCTgcgaaaaactttcaatttgtcgccatttt
gttttgggcATCAACATAGCGCTTTTAGTGACTGACATTATGTTTTGTAG
TGAAGTTAAATGTAAAtgagatatttccaagcacaGCATGATGTAACAAA
GATGGAAATGTGCTTTTTAAGGAACTGGAAGTAACTTCTCGAGACACGCA
TTGTCATCTGACACTTGACCACGNGATGGAAATGTGCTTTTTAATGAACT
GGAAGTAACTTCTCGAGACACGCATTGTCATCTGACACTTGACCGCTCAA
ACCGCTTTCGGTGTCAAGTCCgctcattgtcaattcaagtctatATGGAT
AAAAATATGCATCAGAAAAGTTTTATACCTACAGAGAGTCACCCTGGACT
ATTAATGAACATTTGGTCACATTTCTCTGGCAGTTTCcacccaaatttga
tgttttcgCAAGATCACCGCAAACTTTGCTAGTAATTATTATGTTAACGT
GACTTAAGCgcaacatgtttttgttgatttttggataatttatcaatttt
tatgaaattcttaTCTTTGATTTATGAAACCTGTATGGTTTGATGANN Run BLAST on NCBI transcript from alignment at sc0000491:184999..185946 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024422 ID=TCONS_00024422|Name=TCONS_00024422|organism=Clytia hemisphaerica|type=transcript|length=948bp|location=Sequence derived from alignment at sc0000491:184999..185946 (Clytia hemisphaerica)
NNTCATCAAACCATACAGGTTTCATAAATCAAAGAtaagaatttcataaa
aattgataaattatccaaaaatcaacaaaaacatgttgcGCTTAAGTCAC
GTTAACATAATAATTACTAGCAAAGTTTGCGGTGATCTTGcgaaaacatc
aaatttgggtgGAAACTGCCAGAGAAATGTGACCAAATGTTCATTAATAG
TCCAGGGTGACTCTCTGTAGGTATAAAACTTTTCTGATGCATATTTTTAT
CCATatagacttgaattgacaatgagcGGACTTGACACCGAAAGCGGTTT
GAGCGGTCAAGTGTCAGATGACAATGCGTGTCTCGAGAAGTTACTTCCAG
TTCATTAAAAAGCACATTTCCATCNCGTGGTCAAGTGTCAGATGACAATG
CGTGTCTCGAGAAGTTACTTCCAGTTCCTTAAAAAGCACATTTCCATCTT
TGTTACATCATGCtgtgcttggaaatatctcaTTTACATTTAACTTCACT
ACAAAACATAATGTCAGTCACTAAAAGCGCTATGTTGATgcccaaaacaa
aatggcgacaaattgaaagtttttcgcAGAAATCCTACAACATAACCAAT
GTACAGCAACTTTCTAGCTTCCTTAGAGTCTATTCTTCATTTAAATGAAA
CATTTCCATCAAAGAGATTAAGTTTCGATCTAAAACTTGCAGAAACTTGC
CAAACATTCTGTAAAATCATGCTTACAGCTCTGTTTTTcggtttgttttg
atatattgCACTACTGaggctaccatctttaattttaaggATGACGTAAT
GCCAcgtgaaaaaacattttgacgctcgaaaagggcgtaaaaaaaGCTTT
CTTTTGGCGTATCACATTGCTATGTTCCGGCCAAGATTGAAGAAATAAGT
CCTTAGCAACGGGATTTTTTCTGTTGCTAGGGCGATTTTTCAAGCANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024422-exon-sc0000491-1491911889:184999..185946 | TCONS_00024422-exon-sc0000491-1491911889:184999..185946 | Clytia hemisphaerica | exon |
| TCONS_00024422-exon-sc0000491-1510915933:184999..185946 | TCONS_00024422-exon-sc0000491-1510915933:184999..185946 | Clytia hemisphaerica | exon |
| TCONS_00024422-exon-sc0000491-1575043694:184999..185946 | TCONS_00024422-exon-sc0000491-1575043694:184999..185946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000491 | supercontig | sc0000491:184999..185946 . |
Blast
The following BLAST results are available for this feature:
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