TCONS_00024388 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024388
Unique NameTCONS_00024388
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024388 ID=TCONS_00024388|Name=TCONS_00024388|organism=Clytia hemisphaerica|type=transcript|length=2448bp
GCCAGATTTCGATATTACACCTTTTCTAAAAAATGTACCCTAAAACAGGT
GCAAGTTTTCACCAGGTGTTCAATCCTCCATGTGAAATGTAGTAAAACCA
AAGAAATGCTTTTTGTACAGTCTTTGTCAACAAAGTTGTCAGCAAGGTAA
GAAAAATAGTGCACCATTCTTATTTTTCGGATCATAAATTAAGGGCACAA
TATTGACGGATTAGTTATTTTGGTTACAGACTCATTACTGGACAGACGTG
TATAATCGAGAAAGATGTTGCTTAAAGCGTCTTTTCTCACCGTTGGCATT
CTTTTTCTGAGTGGAATCAAAGCTGGACAAGATGGTGTTTACAATCATGT
CACGTGCGCGCATGATCATGTCAAAATGGGATGTTTCAACAACCAAAGAC
ACATTTTCAAAGATGTATTAGCCACTACTCTTCAAGATTACCCTGAAGGT
TATATCGGCCAAAAAGCCGACTGGAACAACTTCTCAAAGCATTTACAAAC
CCTCGTTTGCAAATGTAAAGATATCGCAGTGAAAAAAGGATACAAATATT
TCGCCATTGGAAATTATGAAATCTGCTATGGAGCAAAGGACGCTGCTGCT
TTCGAAGACTTTTTAAAGAAATCTAAAGGTCACGTGTCAAAACAATGTTT
AATGGGACAATGGTACGAAGAATGCAAAACAAGCGATACTGATTTATGTG
CAGGTGAAGTTGAGAGCATGTATATCTACGAAATGAGACGTGCAATGCCT
ACACAACCCACTCCTGTAAACGGAGGATACAGTCAATGGACAGATTGGTC
GTCATGTGACGCCACCTGCGGGGAAGGTCAACAAGTGAGAGAGAGAACAT
GTACCAACCCTCCTCCTTCCAGGGGAGGAAGAGATTGTGAACAACTTGGA
GCTTCAAGTGAAATCAAGAAATGCAATTTGAAACCATGTGGTGATGTGGT
CTCGAAGAACAAGCTTTTCAAGAAGATTGAGAAGATTCATAAATCGTATT
CTTTCACTTTTGAAATTATGCCTACTGGTACGATCAGTGGATGGTCCAAT
ATTGTTCATGCTTATGATAAAAGTGGTAACTGCTGTGGATACGGACAACG
AATCCCTGCTTTATTTATGTTCTCAAAATCCACTCGTCTTCACATTACCA
ACAGTGTGAACGGTAATGGAAACCATATTGTAAATGAGCATATTCCTATG
GGAAAATTCACTAATGTGACTGTTCAACAAGTTGAAAGATCCGATGGCTC
ATATTTGTATTCTGTTTACTTCAACGAGCGAAGAATAGCATCTACTGTCA
ACAACAAGCCTCAGGAATTTAATAACGTTCAGTTATATGCGTCTGACAAA
TGGTACAatccttcaaaagttattttgagatatttcaacTTCCAAAGTCC
CCTCCCGAAACAATTTTTCAAGCCACAACAAGGGTACGTGCGTCAGTCGA
TCCCCGTCATCGACAAGTCTTATGAAGTCTCTTTCAAAGTCAAACCCAAC
AAACAATATTACGGAAACTACAAAGGAATTTTATCAATCAGCAATACCAa
gGTCAAAGATGGAGTTTCAGGGTTCAGAATTCCCGGTGTTTTCATTAAAG
ATAAAGCAGTGTTACATATCTTCAATGACGTCAATGGTGATCCCAACCGA
GCTGTTTCAAAATCCATTCCTTACAATGAAATGACTTACGTAAAAATCAA
ACAAGTCTTGACTGAATTTGGGCTATACAAGTATACAGTATCCTTGGATG
ACCATGTCATTTATGAGACATTTAATACCAAACCAAAGAGATTTGAAGGA
AACGTTTTGTTGACTTGTGATAAGATACATCAAGGAGCAGATGTCTTGAT
CGAAGATTTTCATTTGGCTACACCAGTCGTCGAACACGATGTTTATGAGA
TCGCACGAAACCAATACATCAAGACAATCCCTATCATCCAAAAAGCTTAT
CGTTTCACCATGGAAATCAAACCTTTGGGCGTCAGACATGGGTGGACAAA
CATTTTTCACGCCACCTCCAATGCCGGTAACTGCTGTGGCTATGGCAGCA
GAATTCCTGCTTTTTTCTTGTTTAGCGGATCCACAAGACTTCATATGTGT
AATGCAGTTAATGGTCGTGGTAATTTCTATATTGATCGCACAATTCCGAT
GAACAAATTCACCAAAGTCGACTTACAACAGgTGTTGGAAAGTGGTGAAT
ATCGATACTCCATTTTCTTCAACAATGTTGAAGTGTACACTATTGTTAAC
AAGAAACCCCAAGTCTTCAAACATGTCAATGTTTACTTCGGAGATCGTTT
CTATACTCCAAGCAATGCTTTGATCAGAAATTTCCATTTCGAAAATCTTT
CCGCTTAAATGATTACTGATACATGGTTgcctatttttgtaatttttcat
ttaaattgataatttttttgcaaagatATAATATACCTGATTTAATCA
Run BLAST on NCBI

transcript from alignment at sc0000491:171650..181971+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024388 ID=TCONS_00024388|Name=TCONS_00024388|organism=Clytia hemisphaerica|type=transcript|length=10322bp|location=Sequence derived from alignment at sc0000491:171650..181971+ (Clytia hemisphaerica)
GCCAGATTTCGATATTACACCTTTTCTAAAAAATGTACCCTAAAACAGGT
GCAAGTTTTCACCAGGTGTTCAATCCTCCATGTGAAATGTAGTAAAACCA
AAGAAATGCTTTTTGTACAGTCTTTGTCAACAAAGTTGTCAGCAAGGTAA
GAAAAATAGTGCACCATTCTTATTTTTCGGATCATAAATTAAGGGCACAA
TATTGACGGATTAGTTATTTTGGTTACAGACTCATTACTGGACAGACGTG
GTGAgatttttcattatttaaaCCATTTTCTGGTGGATAACATTTATCTG
GACTTAAACAAATTTCAGtgcaatttttgaaagtttattatAGCAAAAGA
CTAGTTTTTTTACTGGCTTCTAGTTCCCAGGTTTTGGATGAAAGCCTCGC
TTTTGCGTACTTTAATTTCTTCATTGTACTTCTCTTTCAGTATAATCGAG
AAAGATGTTGCTTAAAGCGTCTTTTCTCACCGTTGGCATTCTTTTTCTGA
GTGGAATCAAAGCTGGACAAGATGGTAAGCAGTATATTTGCTTTTAGGGG
TTTAGAATGACCCAATTTTATGAATGGGAAGAGAATAACACACCCTCGCa
gcccggtagaactttttcccacatcgGCGTTAAtgatttctatcgaaatc
ccagattaatattgtaatttttatcaTATATTCGTTGTCGATGTCAACTA
AGCTGACAGTTTCGATGTTTTTCTGCTTGACAGCTTCcttgtttttggaa
aaattttgaaacttatttttcttatggaTGTTGGAAGCCCTAAATCTGCA
TGACTGATTGGCTAGAATATAAATTTTCATCCGTAACATATTTTATACAA
ATTGAACTTAAAAACTTGCAACCAAAcaacactgtaagggtcagaaagat
ccagtaaaatgcactgtaagggtgtaagaGTCCCTTTTCACTGCTTAAGA
ActgtaattgtttttttttcgaaagccaattttttggcggcacatggCGT
CTATTTTCACTTaatcttatttaaaaaacacaGTCCATGTATTATCGATC
CTTTTTTACGCCGGCTGTTATTTAGAGCTGGTTTCTTCTACACCGGCTCT
TATTACGACAAggctgaatttttttcaatctcTACCCTGCCCTAATTTAA
TTCCGATCCTTACGCCGGTCCTCATTACGTCATTGACGACTCATGACGCC
ATAAGGGTCAGCGTAAAAAGGTTCGATAAAGTAACATCGTTTTTGTTATT
CAGGTGTTTACAATCATGTCACGTGCGCGCATGATCATGTCAAAATGGGA
TGTTTCAACAACCAAAGACACATTTTCAAAGATGTATTAGCCACTACTCT
TCAAGATTACCCTGAAGGTTATATCGGCCAAAAAGCCGACTGGAACAACT
TCTCAAAGCATTTACAAACGTAAGTTACAGCTCTTTTTAAGTTGAAATGA
ACATACCTGGAACCATAGATGCTGGAACCTTTTAAAACtcactctaattc
gaaccttttttattcgaatcactctaatttgaattaaaatattggtcccc
ttaGCTTAAAAGTGTTGAATTAATTACTgttatttttctctaattcgaac
aaaatattTGGTCCCCATGAAGATCGAATCAGGGAGAGCCAACCTAGATT
TattgtcaaattttgaaagctcttgaATCTGAGCTCTAAGGCCTGCTATG
CCGACTAAACTAGATTAAATTTTGCCTTCCAGCCTCGTTTGCAAATGTAA
AGATATCGCAGTGAAAAAAGGATACAAATATTTCGCCATTGGAAATTATG
AAATCTGCTATGGAGCAAAGGACGCTGCTGCTTTCGAAGACTTTTTAAAG
AAATCTAAAGGTCACGTGTCAAAACAATGTTTAATGGGACAATGGTAAGA
ATATCGTgtatactttttaaaaacaatgaacATAGACTGTTTTATTTCTG
TCCTTATACTCTGTATCAAAGACTCGTAAGGATTTCATCCCTTTTGGCCT
AAAACCGCCTCCGGTGAGCTGACTTTTTCTCGCACtgtaaatgacaaaat
ttgaaatctccAATCGCTAAAAAAATTCATCCCTATGCTATTTAACTCTT
TTGTTTTATCTACACTGGGCTAATGAATCGTCGCccggtcactgagacag
gggtgttaccCCTGATTTAAGATTCATCTTTCGCCTGTATATTTAGACTt
tgcaaattttgacaaaagtgCTAAACGCTGTGCTTAAAGCAGTGCCATAT
AAAATTAGGACGCTTATCTTATCTAGATATTCTTATTTCCTCATTCTTAT
GTTAATTTTAGGTACGAAGAATGCAAAACAAGCGATACTGATTTATGTGC
AGGTGAAGTTGAGAGCATGTATATCTACGAAATGAGACGTGCAATGCCTA
CACAACCCACTCGTAAGTGTTGAGACTCCTCATTCAATGTCAAGGATCGA
AACGAGCACCTTaccaaaaaccgaaaatttttatcttgtttcttagtgag
ttccactttgacgattttctgaagaaatttgatttttctcttccctagct
tcaaaagtttaaagtgacgtaaGCCCGAAAAACTGGGCTGACGCGGATGA
CGGCTAGTATAGGCTAAGAACCTAAGCACCTTCGAATTATTAGAAGGATG
AGCGAAATCGACAAAAATACAACTTCAGAAATAGTCAAAATAAGCTATTT
AAGGTTTTAGAAAAGACAAAATTATTGTTTAGAAGAAATTCAAGATCAGC
AGAACTTTTTTAGCCATTTATGAAATCTGAGGCTGAAATCATGACTCCTG
ATCTTATAGAAATtgtttctaaaaagaaaaacagccCGAAACATATACCC
ATTACTTTTGGCCCATCATCGGGTCTCTCATTAGCATTTCGTTGTCTGTG
GTGCTGTATGACCGTTTTTGAAGAAGCAGCGTTTTGTTAATTCAAGtttc
tttttgaagaaaatttgccTTGTAGCCTTGCAAACAAACATTCGACTATT
GATATATGTCATTGGGCCTTCTTGACGCTTAAGCTTTTTTCTTCTGCACA
GCTGTGAACAGAGAGTTCCgtaatttcaaattgtgatatctCGACATTGG
AAAATAGTTAAACCAAAATACTTGAAGGTTTTACTCAGGACCGTAGATGG
TTCCCAGCTGacactagtctgaatcgcagacctctacaaaaccccaggta
gtatataaggagcacgaatccgttagtggatgtcaGCAGCCTAAGCTGAC
ACAcaaagttgtttcaacgttcatttaacgttatgaatattagaaaaacg
ttgaaaagacgttgtgtaccagctagGTTACTCCAGGGCATATCTCAAAC
TATCTGATTATTCCTTTAAGACACCAGATCAAATACATTCCTTTTCTTTC
AATACAGCTGTAAACGGAGGATACAGTCAATGGACAGATTGGTCGTCATG
TGACGCCACCTGCGGGGAAGGTCAACAAGTGAGAGAGAGAACATGTACCA
ACCCTCCTCCTTCCAGGGGAGGAAGAGATTGTGAACAACTTGGAGCTTCA
AGTGAAATCAAGAAATGCAATTTGAAACCATGTGGTAAGTCTTTATAGGG
CTTTTCCAATCAAAGTGCGTACTCCACATGTTGAGgttcattttggaatt
tcattCTCTTAAATTTGAGCTACCCCTTTGGAATTCTTAAGTTTAAttta
tgatggtgatattcttaccctattcttatttttttggcccaTTCCAACAA
AATTGAGAAGAGATCTTCATTTCTTGTTCCAGGTGATGTGGTCTCGAAGA
ACAAGCTTTTCAAGAAGATTGAGAAGATTCATAAATCGTATTCTTTCACT
TTTGAAATTATGCCTACTGGTACGATCAGTGGATGGTCCAATATTGTTCA
TGCTTATGATAAAAGTGGTATGAAAGAttctatttttattcaaaactgTT
TCACatgttactgttccgtttcgctccgatataactttcgttacggatcg
agagtgttcgTATTGAATTCGGAACGTTTcagagcaagaaaacggagttG
TTCCGTTattcgatgaaaaaagtggaacgaaaccgtttcgatctgttttg
ctttgtaacgtcttcttttttgacgttcacacttgtttcggaactgtttc
ggaacggaacggaaccggGTCACATATATAGTTTGATTGACTGGTAAAAG
TGAGAAATTCAGCTGGAAGATCTGTTTATACCTGAACCCTTGACATAAAA
TTTACCCACAGAGcaaaaacaacacaaaactATGCACATGTCCAAACAGG
ACTTTGAGCTACTATATAGGTTTTTCTAAGACGTCCTGTACATAttattt
ctgacatttttctgattcaattttaaatttttatgacgtcatcgttatGA
CGTCAAAAACCATGTAACCCGCCTGAGGACGTCTTGCAGTATCAGCCGAT
TCAGGATACAAGAGTAACATACCACCTCCAAACATTAATTAAAATTTCCT
TTTGTACCAGGTAACTGCTGTGGATACGGACAACGAATCCCTGCTTTATT
TATGTTCTCAAAATCCACTCGTCTTCACATTACCAACAGTGTGAACGGTA
ATGGAAACCATATTGTAAATGAGCATATTCCTATGGGAAAATTCACTAAT
GTGACTGTTCAACAAGTTGAAAGATCCGATGGCTCATATTTGTATTCTGT
TTACTTCAACGAGCGAAGAATAGCATCTACTGTCAACAACAAGCCTCAGG
AATTTAATAACGTTCAGTTATATGCGTCTGACAAATGGTACAatccttca
aaagttattttgagatatttcaacTTCCAAAGTCCCCTCCCGAAACAATG
TAAgtataaaagttaaaaaggttttgtttttaaataagagtgatatcgtt
tgttgactcatcaattttaatttagctttttcacattgaattgacacgga
tgtggagcaagattggtcagaaagaggaaaagaaaaacatttttatgctt
atatcagcataatataacaataggaagacactgccccgatatgaaatatg
tgtctgatacgaaacagaaacacttatgtaaaaataaaacctttaaagac
ggcaaattaattaaaaagaataaggTTTTATTGTTACTATGAGTAAAGAG
GTTGCCGCCTTTATCTTACTTTGagaaaatttcttattttgtcACTCAAA
TATTTGATCCTTTAATTCAAAGACTTCACTAATCGCATATCGCCAAAAAA
CAACGTTCAGCTAACATCTGCATTACGTCCATAttctagagccttagtta
agtcaAAGCCTTTGGTTGTAACTTTAGCCTTTTAACCTTATAGaccaaaa
tttttgctgtgaaattAATTAGCCatcgattaattttttaaacgaggact
ctaaaacacccgacttattaggaaaatggacaaaaatactcacaaaatgg
ggaaaataaggatattttaaaaacattttgaggtttaaaactcaaaaaat
taagaacatccgaaggattcaaaaattttggatgttcttataaaaaaaga
cttaTAATTAAAATCAACAGTTCTTATCTTTTCTAACTTTAGTTTTCAAG
CCACAACAAGGGTACGTGCGTCAGTCGATCCCCGTCATCGACAAGTCTTA
TGAAGTCTCTTTCAAAGTCAAACCCAACAAACAATATTACGGAAACTACA
AAGGAATTTTATCAATCAGCAATACCAaggttcaaaacttttttatatac
acctttttgaccgtagccaccaattgccgtgcgggcattgttttgtccgc
tttatcccactaaaaccgtcccagtccttttttcgcacataTAGACATTA
gaaaaatgcttcaaaaaaggattgggacggttttagtgggatacgGTCGA
AAATATATATTCGTGATATCCATGACATAATGTTTTAAAAGGAAGCACCT
AACAAGGACAGGGTTTTTGCCTTTAATTATAAATTCATATAAACGCCTGG
ACTTTTTTGGGTTATTCCGtataattttttagaatttacgACCCTTAAAA
TACTTTTGCTAGAACCTCAaaaagctcttccaagcaaaaaaaaagtgaat
tacgCAAAagatattgctgctattgttttcgaaaacccgcgaagcttttT
ATTGGTCAAccgctgaaattctattttaatgtcacgtgacctaggtaggt
aGGTAGGAATTCCTACCTAACCTTGGCACACTTTttagccaaagcacgac
atctatcTCTTATAGACTACTTACATGTTACTGTTACTGTTTTCTTTACC
AGGTCAAAGATGGAGTTTCAGGGTTCAGAATTCCCGGTGTTTTCATTAAA
GATAAAGCAGTGTTACATATCTTCAATGACGTCAATGGTGATCCCAACCG
AGCTGTTTCAAAATCCATTCCTTACAATGAAATGACTTACGTAAAAATCA
AACAAGTCTTGACTGAATTTGGGCTATACAAGTAAGTTCTAGTTTCGACG
GCCCACTTTTCACCCCGCCTATTCCTATTCCCCTGTTCATTAATTTGGGA
AGATAGTTGGCTGTCAAGAGTCAATGCactgccctcttttgacgtcaatg
caatgttttcttttaatcttttccaagcaaacattttaactgccaacttt
gcgCCCACTTTTCGTCCATTTAAAAACAATTAGAATATGCAGGGTAGAAA
GTCGACCGttcaggcggctgcaatgcaattaGCGTTGCGTTGCAAGCGCG
cgagaaattgcaaaatgtagcacgtcaattttttctgcaATTGCTCTGCA
ACGCAATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAATggaatgttttgtaattcgaatattttgtaa
ttcgaatgttttgtatttcgaatgttttgtaattcgaatgtttttttgac
gtttttcctgGTTCCTTTTCTTAGATGGCTAGACAGCAACAAttttcagg
cggctgcaatgcaacaattgcattgcagccgcctgaaaaaactatcagtg
tagccttagcttaaACTAGAGCTAAGTATTAAAACTCTGCTTCACCTTAA
AAAACTGGAATAAAAGCTTGTACTTTGAGAGTTAAACAATGGATTTTGGT
ACCATCAGAAAGGTATTTTCATATTCGTTCAAGGTTTACACTCTTTCAAA
TCAAGATGTTAAAAAGTTATGGCCCTTAGTCTTGGACGCGGTATATTGGC
GGTAATTTTGAATTGGATTCCTAGCCTGGATACTTTTGAGCTTGACTAGA
CTCAGCGTCGTCAAATATTAATCTGAAAAATTAACTTCAAGTAGTAGACT
CAAGCTCTCTACAGGTAagtacagttgacactctctaattcgagcttCTA
TTATTCTATACGCTGTAGTAATTCGTAAATGTTCTACTTTGCAGGTATAC
AGTATCCTTGGATGACCATGTCATTTATGAGACATTTAATACCAAACCAA
AGAGATTTGAAGGAAACGTTTTGTTGACTTGTGATAAGATACATCAAGGA
GCAGATGTCTTGATCGAAGATTTTCATTTGGCTACACCAGTCGTCGAACA
CGATGGTAAAAAATAATGTCTATGTTTTGACTAGAATTTTCTTCCTCTCT
AAAAATTGTCCGTCAACTAGCCAAAAGAAGCGAGGCCTTTCCAATGCAAC
TATTTAAACAAGGTCTTTTTCTATGAAATCGGTTCGGACATATTTAAGAA
GCCTTCCCTTTTCTAGCAAGGCCGGCGCTTAGAGCTTATTAGCCATTGTG
ACACGAGAGAAAAACTGTTGTTTTACAATCATTTCTTCATATTTCCAGTT
TATGAGATCGCACGAAACCAATACATCAAGACAATCCCTATCATCCAAAA
AGCTTATCGTTTCACCATGGAAATCAAACCTTTGGGCGTCAGACATGGGT
GGACAAACATTTTTCACGCCACCTCCAATGCCGGTAACTGCTGTGGCTAT
GGCAGCAGAATTCCTGCTTTTTTCTTGTTTAGCGGATCCACAAGACTTCA
TATGTGTAATGCAGTTAATGGTCGTGGTAATTTCTATATTGATCGCACAA
TTCCGATGAACAAATTCACCAAAGTCGACTTACAACAGGTATatgattca
tgatattcatgacgcaatgttttctacggaaataccccggtttttgccag
tagtggcaaattttatacaacttttgtctagtctCTAGTTTAATCTAGTT
TTGAATTTTACTTTAAAACGCGTCATGAATAAATGGAGTAGAAATTTTCG
AAGTTGTCTAAAATAACGTAGCTAACGCTATTATGAGAGCAAAGGTTTTG
AATAAGAATAAGTCACCTCTACAAATTAAACGTTtgtttccataatggca
gattttTCTTGaatactctttttttttttttctttattgaaacaaagaca
cgtgtacactacgaacatatattacaaaacattacttaaacataaaatat
agtccctccccccgctaggaactaacgttatatcgccagaggtactagac
tatgtaaaaaaaaaaataagtaaatacaatgtatagcaatgtgccctccc
ggttattaccataatggctttatggcaactcctgaacttgggcacaggat
gtacggttacacattttatggattgcattgtggagtcacaagagtgctca
aactgcgAGCAGCGAGCAATGCATAATGCAAATAGTGAGCTAAATaagta
aatagaaaaaaaaaatcttggagaaggaagctacagttgttaggtaaaag
tctaaaataaagcaccgctaaaccttccagtttcgttaagaaattcaaca
acagaacaaagaatagatttatttagatttgaagtcaaactttcatcccc
atataataaaagccgacagaaaaaaggagggttaagtggcggatgaaaaa
taatgcctagggtctgaagtttgtcgaacaaagatttcttgcatgggaat
atatagagcagcgcagaagaaagtgttgagtgttttcaacagagttagtt
cggcaaccacagaaagggtcttGAATACTTAACTTTTGCAAAATCTGAAA
AGCCTCTGTTAACTTTAGTTTTGTTCCAGTTTGGAATTTTCGGGGTCTCT
TTTTGATAACGGATATATGGCCACTCACTTTTTGTCTCTAAGCAATagct
ttgaaaataattgaaaggTTTTTGGCAGATACTACCAGGATTAATCTCCT
CatcaatacacaggttgcaaaattaaagtcagACGTCAAATCACGCTTTT
AAACTTAAAATCTTTATGtgttgttacatgacatttatttctgattcaGG
TTCAATTTTATGGACACTAATAAAATTATCAGTAAGTTGTAAAGTatgga
ataaaatcacgtgaactttttcgagtaatcacatgttttgactgcattga
tataattttgcagccCGTAAATTATACAAAGAGATTAGGCCTGGGACGAG
GTTGAGTGTCCACCAATCAAAATAGATGAATTAttcttattttccttttt
tataggTGTTGGAAAGTGGTGAATATCGATACTCCATTTTCTTCAACAAT
GTTGAAGTGTACACTATTGTTAACAAGAAACCCCAAGTCTTCAAACATGT
CAATGTTTACTTCGGAGATCGTTTCTATACTCCAAGCAATGCTTTGATCA
GAAATTTCCATTTCGAAAATCTTTCCGCTTAAATGATTACTGATACATGG
TTgcctatttttgtaatttttcatttaaattgataatttttttgcaaaga
tATAATATACCTGATTTAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013688XLOC_013688Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024388-exon-sc0000491-1491911889:171650..171899TCONS_00024388-exon-sc0000491-1491911889:171650..171899Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:171650..171899TCONS_00024388-exon-sc0000491-1510915933:171650..171899Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:171650..171899TCONS_00024388-exon-sc0000491-1575043694:171650..171899Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:172090..172173TCONS_00024388-exon-sc0000491-1491911889:172090..172173Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:172090..172173TCONS_00024388-exon-sc0000491-1510915933:172090..172173Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:172090..172173TCONS_00024388-exon-sc0000491-1575043694:172090..172173Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:172903..173068TCONS_00024388-exon-sc0000491-1491911889:172903..173068Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:172903..173068TCONS_00024388-exon-sc0000491-1510915933:172903..173068Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:172903..173068TCONS_00024388-exon-sc0000491-1575043694:172903..173068Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:173382..173543TCONS_00024388-exon-sc0000491-1491911889:173382..173543Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:173382..173543TCONS_00024388-exon-sc0000491-1510915933:173382..173543Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:173382..173543TCONS_00024388-exon-sc0000491-1575043694:173382..173543Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:173961..174061TCONS_00024388-exon-sc0000491-1491911889:173961..174061Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:173961..174061TCONS_00024388-exon-sc0000491-1510915933:173961..174061Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:173961..174061TCONS_00024388-exon-sc0000491-1575043694:173961..174061Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:175057..175233TCONS_00024388-exon-sc0000491-1491911889:175057..175233Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:175057..175233TCONS_00024388-exon-sc0000491-1510915933:175057..175233Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:175057..175233TCONS_00024388-exon-sc0000491-1575043694:175057..175233Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:175432..175566TCONS_00024388-exon-sc0000491-1491911889:175432..175566Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:175432..175566TCONS_00024388-exon-sc0000491-1510915933:175432..175566Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:175432..175566TCONS_00024388-exon-sc0000491-1575043694:175432..175566Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:176160..176498TCONS_00024388-exon-sc0000491-1491911889:176160..176498Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:176160..176498TCONS_00024388-exon-sc0000491-1510915933:176160..176498Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:176160..176498TCONS_00024388-exon-sc0000491-1575043694:176160..176498Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:177242..177378TCONS_00024388-exon-sc0000491-1491911889:177242..177378Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:177242..177378TCONS_00024388-exon-sc0000491-1510915933:177242..177378Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:177242..177378TCONS_00024388-exon-sc0000491-1575043694:177242..177378Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:177952..178130TCONS_00024388-exon-sc0000491-1491911889:177952..178130Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:177952..178130TCONS_00024388-exon-sc0000491-1510915933:177952..178130Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:177952..178130TCONS_00024388-exon-sc0000491-1575043694:177952..178130Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:179594..179754TCONS_00024388-exon-sc0000491-1491911889:179594..179754Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:179594..179754TCONS_00024388-exon-sc0000491-1510915933:179594..179754Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:179594..179754TCONS_00024388-exon-sc0000491-1575043694:179594..179754Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:179998..180287TCONS_00024388-exon-sc0000491-1491911889:179998..180287Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:179998..180287TCONS_00024388-exon-sc0000491-1510915933:179998..180287Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:179998..180287TCONS_00024388-exon-sc0000491-1575043694:179998..180287Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1491911889:181705..181971TCONS_00024388-exon-sc0000491-1491911889:181705..181971Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1510915933:181705..181971TCONS_00024388-exon-sc0000491-1510915933:181705..181971Clytia hemisphaericaexon
TCONS_00024388-exon-sc0000491-1575043694:181705..181971TCONS_00024388-exon-sc0000491-1575043694:181705..181971Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:171650..181971 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.134333	0.135278	0	0	0.428336	26.8113	22.2964	0	0.0948091	5.06707	6.77097	171.688	192.193	46.7197	55.7133	13.989	20.8488	63.872	50.0713	2.42508	1.86261	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top