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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024239 ID=TCONS_00024239|Name=TCONS_00024239|organism=Clytia hemisphaerica|type=transcript|length=588bp
ccattaaagatgctacattactgatttcttgatcaacaaatagtcatcaa
atacgacagagatagaataacagaaattcagatgttatcattccagccgc
ggctttcttatactatggtacGAATTAGACTTCCCGTTCGAGTTTGCAAG
TATTAAAAGTGTACAAGTCTCTATCCAAGATAATTAAcattatttaactt
tttttttaaggaGTCAAAGAAGAGAACTCGATGAAAAGATCTGATTGGAG
TAAATATCAAGTGGACTATGTTTTATCCGATCTTACTGGAAGAACTCTTG
GTGGTTTTACAAATAACATGTTTACCGGCGACCAGTTCACATTGACGAGT
AAAATCGGTGTCTGGAGTAGTATTAATAGTACCACCATGGAATTTATTAT
GGCGATGGAACTGAAAGAAATGAACAGCGAAGTGATATTTTGTTCgcatt
tgaaaatgaagagcGTTAAACTCGAAATACAATACAAGGGACAGAAAAAA
CAAGGAGAGCTCATCAAGTCATTGCAGGGAGAGCTCAAGTCATTTAAACT
GGATGGCTCAGTACAGATTAAAGGCGTTTGGAGAAagg Run BLAST on NCBI transcript from alignment at sc0000482:249401..251091+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024239 ID=TCONS_00024239|Name=TCONS_00024239|organism=Clytia hemisphaerica|type=transcript|length=1691bp|location=Sequence derived from alignment at sc0000482:249401..251091+ (Clytia hemisphaerica)
ccattaaagatgctacattactgatttcttgatcaacaaatagtcatcaa
atacgacagagatagaataacagaaattcagatgttatcattccagccgc
ggctttcttatactatggtacGAATTAGACTTCCCGTTCGAGTTTGCAAG
TATTAAAAGTGTACAAGTCTCTATCCAAGATAATTAAcattatttaactt
tttttttaaggaGTCAAAGAAGAGAACTCGATGAAAAGATCTGATTGGAG
TAAATATCAAGTGGACTATGTTTTATCCGATCTTACTGGAAGAACTCTTG
GTGGTTTTACAAATAACATGTTTACCGGCGACCAGTTCACATTGACGGta
attgatattttcatcagattacacgtttttttataagaacattcaaaatt
tttgaagcctttcgatgttcttaactttttcagtttcaagcctaaaaatg
ttcttattttgacaatcttttggatatttttcaccattttcctaagaaat
atggtgtttttgagtccacaaagcattaaaacgttcttaacttattctta
acattttcgctgtcaaagccttatgttcttatataatctgttcttataaa
aaaagcgatTACATCGCTGATGTTTTTAACTTATTGAGTTTTCAGCTTAA
AAAagttgttcttaaaatattcttattttcaccattctgtgattattttt
gtgtgattacctaagaaattgagtgttttagagtccgtgaagcgttcaaa
tgttcttaatattttttatgctttatcTTCTTATATACTACGCCTtttct
cttataaaaaatatgttatttttcaagaaatcaAATTTAGCGTTTCacaa
tttacaatttttgtGTCTATTTCGTGCATATCAATGTCCAGGTAATCCCA
TGAGAAAATATAATCCACTTAATTCATGAATTCGTATTTTTGGCGAAAAC
TTTCCtttaaaattatgattttcagataaaattgaGCTAATTTTTGGTGA
ATGCTCTCGTGAAGCcattgtaaaattttcaaaacttatgACTCATGGAA
ATTAAATGCAAAAGAGTTTTGTGATTGTTTtggctcgcgaaatttaatgc
GTTCGGAGTATTTTCTTCGAGGCTCAACAACAATTATTACgaataaaaaa
ttaatgaagtAGGGTCTTTCCTTGATACACATTTTCGATCTTAGCCGCCA
ATCGCCACTCGGGCATTTTTTGGTCCATTTTACCatcctaaaaccgtccc
agtcttttttttgcacctaaagacaatagaaaaaagtgtaaagaaAAGGA
tgggatcgagtttagggtggtaaattaaataataaaatggCACGCACCTG
ACTGctcgactacggtcgaaaaggtgtattgatccttcttttattgaaaa
aaataattcacttaAAAATGTATTGAGTACTTTCTGTTGTATTCTTTTAG
AGTAAAATCGGTGTCTGGAGTAGTATTAATAGTACCACCATGGAATTTAT
TATGGCGATGGAACTGAAAGAAATGAACAGCGAAGTGATATTTTGTTCgc
atttgaaaatgaagagcGTTAAACTCGAAATACAATACAAGGGACAGAAA
AAACAAGGAGAGCTCATCAAGTCATTGCAGGGAGAGCTCAAGTCATTTAA
ACTGGATGGCTCAGTACAGATTAAAGGCGTTTGGAGAAagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024239-exon-sc0000482-1491911889:249401..249747 | TCONS_00024239-exon-sc0000482-1491911889:249401..249747 | Clytia hemisphaerica | exon |
| TCONS_00024239-exon-sc0000482-1510915933:249401..249747 | TCONS_00024239-exon-sc0000482-1510915933:249401..249747 | Clytia hemisphaerica | exon |
| TCONS_00024239-exon-sc0000482-1575043694:249401..249747 | TCONS_00024239-exon-sc0000482-1575043694:249401..249747 | Clytia hemisphaerica | exon |
| TCONS_00024239-exon-sc0000482-1491911889:250851..251091 | TCONS_00024239-exon-sc0000482-1491911889:250851..251091 | Clytia hemisphaerica | exon |
| TCONS_00024239-exon-sc0000482-1510915933:250851..251091 | TCONS_00024239-exon-sc0000482-1510915933:250851..251091 | Clytia hemisphaerica | exon |
| TCONS_00024239-exon-sc0000482-1575043694:250851..251091 | TCONS_00024239-exon-sc0000482-1575043694:250851..251091 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000482 | supercontig | sc0000482:249401..251091 + |
Blast
The following BLAST results are available for this feature:
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