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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024063 ID=TCONS_00024063|Name=TCONS_00024063|organism=Clytia hemisphaerica|type=transcript|length=1653bp
TTCGGTTGTAGCTGTAATTGGCCTGCCAGAACCAGGTCTTCTATCCATTG
AACCcgtttcatgaatttttttgacaagGTTCTGGACAGTACAATGATGG
TAGACAACACGTCTGACAAGAATAGGGTTAAAAACTTCAGTgtaaattat
attaatattaatactgtatatgaaattcttttttttttcagttcttGAAT
TAAAAATACTATTTAAGGTGGTAGTCTACTGAGAAATGGAAAAAGTCATT
TTTTTACTTTTTTTGtaataacttttgaaatatttaagatatctcaatga
aactttccacaatggTAGTAAAACTATTAACCatgcaaaatatgaaaaaa
aaatTCTAAAAATAGCACAGACGGGGGTGATACCGACCAGGGGGTTACGT
ACTATAGTTTTCTCCATACAGGTTTTTAAAGACTTCTAAAACGTTTTAGC
AAAAGATTTTTGGTATGGTGGTTGGTAATCATCAAAGGCAGAGGATGAGT
GAAAAAAAAATTCATAATTATTTTCCAGGGGGTCTGGAACCTAAAAAACG
tgatttttgagatttagaaCCAATGAcagatttttctgaattttttcttc
ACTCATCCTCTGCCAAATGGTACAAGAAGcaatccctgaaaatttcatgg
aGCTAGCACttttcaatcccgagaaaaaccTGCATAGGCGTtagcaaacc
cccggaaacgcgTTTTTAGAAAATCAAAGAAAAAGACAAAAGTCTGCAAA
AATGGGTATTATTTTAAgctggaaagctcttttcaaaaaatttcttcact
gaatACTCATCCAACCAGTCAGGTttcaaaagttaaagtaaaacatttca
caaaaattgataaaatattcaaaaatcaacaaaaacatgttgAGCTAAAG
TCATGTACATACATAGCAAAGTTTGCGGTAATCTTGCGATAACATtaaat
ttgggtgaaaaaagCCATATAAGTGTGTCAAAATGTTCATTGAAAGTCCA
GCATGACTCTCTGTAGGCATTTAAACTTTTTGTgtgcatatttttattca
catagACTAGATGACAATGAGCAATGAGCTGGCTTGACCGCCGAAAGAAG
GCTGTTATGAGTGGCGGGTGTCAGATGAGAATGTGCGTCTCCAGAAGTTA
AgtccagttcattataatgcaCGTTTCTATctctgttacatcatgttgtg
ctAGGAAATATCTCAGTTACATTTAAATCCACTACAAAACATTATGTGAG
CCACCAAAAGCACACCGCCTGGCCTGCTCAATCCAAGAGCAAGACAAAAT
GGCGGCAACTGTTTTTCGTAGAAATCCAGCAACATAACCAATGTACAGCA
ACTTTATGGCTTCTTTAGAGTCTATTCTTCATTTAAACAaatcatttcca
tcaaagaaattaagttttgatctaaaacttgccaagaaatctgcagaatc
atgcttacagcttgcttttcagctttttttgatgtgttacactactgaag
ctaccatctttaatttcaaggatgacgtaatgccacggaaaataatattt
tgacgctcgaaaagggcgtaaaaagagctttcttaTGGCGTATCACATTG
CTATGTTTCGGCCGAGATTGAAGAAATAAGTCCTTAGCAACGGGATTTTT
TCC Run BLAST on NCBI transcript from alignment at sc0000471:14362..16014 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024063 ID=TCONS_00024063|Name=TCONS_00024063|organism=Clytia hemisphaerica|type=transcript|length=1653bp|location=Sequence derived from alignment at sc0000471:14362..16014 (Clytia hemisphaerica)
GGAAAAAATCCCGTTGCTAAGGACTTATTTCTTCAATCTCGGCCGAAACA
TAGCAATGTGATACGCCAtaagaaagctctttttacgcccttttcgagcg
tcaaaatattattttccgtggcattacgtcatccttgaaattaaagatgg
tagcttcagtagtgtaacacatcaaaaaaagctgaaaagcaagctgtaag
catgattctgcagatttcttggcaagttttagatcaaaacttaatttctt
tgatggaaatgattTGTTTAAATGAAGAATAGACTCTAAAGAAGCCATAA
AGTTGCTGTACATTGGTTATGTTGCTGGATTTCTACGAAAAACAGTTGCC
GCCATTTTGTCTTGCTCTTGGATTGAGCAGGCCAGGCGGTGTGCTTTTGG
TGGCTCACATAATGTTTTGTAGTGGATTTAAATGTAACTGAGATATTTCC
TagcacaacatgatgtaacagagATAGAAACGtgcattataatgaactgg
acTTAACTTCTGGAGACGCACATTCTCATCTGACACCCGCCACTCATAAC
AGCCTTCTTTCGGCGGTCAAGCCAGCTCATTGCTCATTGTCATCTAGTct
atgtgaataaaaatatgcacACAAAAAGTTTAAATGCCTACAGAGAGTCA
TGCTGGACTTTCAATGAACATTTTGACACACTTATATGGcttttttcacc
caaatttaATGTTATCGCAAGATTACCGCAAACTTTGCTATGTATGTACA
TGACTTTAGCTcaacatgtttttgttgatttttgaatattttatcaattt
ttgtgaaatgttttactttaacttttgaaACCTGACTGGTTGGATGAGTa
ttcagtgaagaaattttttgaaaagagctttccagcTTAAAATAATACCC
ATTTTTGCAGACTTTTGTCTTTTTCTTTGATTTTCTAAAAAcgcgtttcc
gggggtttgctaACGCCTATGCAggtttttctcgggattgaaaaGTGCTA
GCtccatgaaattttcagggattgCTTCTTGTACCATTTGGCAGAGGATG
AGTgaagaaaaaattcagaaaaatctgTCATTGGttctaaatctcaaaaa
tcaCGTTTTTTAGGTTCCAGACCCCCTGGAAAATAATTATGAATTTTTTT
TTCACTCATCCTCTGCCTTTGATGATTACCAACCACCATACCAAAAATCT
TTTGCTAAAACGTTTTAGAAGTCTTTAAAAACCTGTATGGAGAAAACTAT
AGTACGTAACCCCCTGGTCGGTATCACCCCCGTCTGTGCTATTTTTAGAa
tttttttttcatattttgcatGGTTAATAGTTTTACTAccattgtggaaa
gtttcattgagatatcttaaatatttcaaaagttattaCAAAAAAAGTAA
AAAAATGACTTTTTCCATTTCTCAGTAGACTACCACCTTAAATAGTATTT
TTAATTCaagaactgaaaaaaaaaagaatttcatatacagtattaatatt
aatataatttacACTGAAGTTTTTAACCCTATTCTTGTCAGACGTGTTGT
CTACCATCATTGTACTGTCCAGAACcttgtcaaaaaaattcatgaaacgG
GTTCAATGGATAGAAGACCTGGTTCTGGCAGGCCAATTACAGCTACAACC
GAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024063-exon-sc0000471-1491911889:14362..16014 | TCONS_00024063-exon-sc0000471-1491911889:14362..16014 | Clytia hemisphaerica | exon |
| TCONS_00024063-exon-sc0000471-1510915933:14362..16014 | TCONS_00024063-exon-sc0000471-1510915933:14362..16014 | Clytia hemisphaerica | exon |
| TCONS_00024063-exon-sc0000471-1575043694:14362..16014 | TCONS_00024063-exon-sc0000471-1575043694:14362..16014 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000471 | supercontig | sc0000471:14362..16014 . |
Blast
The following BLAST results are available for this feature:
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