TCONS_00023676 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023676
Unique NameTCONS_00023676
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1315

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023676 ID=TCONS_00023676|Name=TCONS_00023676|organism=Clytia hemisphaerica|type=transcript|length=1315bp
AGCAGAAGCAGGCAGAATAGAGGACTTTTGAAAGATATTGGACTTTGTTA
GTTCAGTTTTTTAACTATCAATAATATTTAAAAAGCCACAatatagtaaA
TCTCTGTCAAGTAAAATACACTCGATAATACACAAAGATGGCTTTACAAA
ATGGACATGCCAAGAAACAAGACTACatcaagATTGGTGATGAATTTACA
ACTTATGACCCAGACCTTTTCATTCTTCCAAAGCATTACAAAGATTCCAT
TGGAAGTGTATTACTACCCCATGGATTCATCATGAATAgGATCCAAAGAC
TTGCACAGATGATTTTACAAGACTATGGAGATGAATCAATCACATTGCTT
TGTGTACTGAAAGGTGGATTCCGATTTTGTCAAGATTTAATGACCAGTAT
TGGGGAACTCAACAGAAGTGCAGAAAAATCACTACAAATGAATATCGAAT
TTATCAAAGCTAAAAGTTACGTTAATGACCAACAAGGAAGTATTATGATC
TCATCACATGGTTCGCCGCTAAATTTAGAGGGAAAGAATGTCTTAATTGT
CGAGGATGTAGTTGACTCGGGAAGAACGAtggaaaaattgattgaaaaag
tgTCAGAAGACAAACCAAAATCATTAAAAGTTGCAACACTATTgctgaaa
agaaataaaaattcaacGGGATATAGACCAGACTATTTGGGCTTTGAGAT
TCCAGACACTATTTGGCTCATTGGATACGGTGGTTTCGATTACAACGATT
ATTTCAGAGATCTTGATCATATTGTTATTTTGAATGAATTCGGACGCAAG
AAATACACGAGATGATATTGTACATTGCTGCCCAATTGCGCAATACCTGG
GATCGCGGATTATTTGGAATTGCACTATTTTAACTTGCTTCGTATAGTAT
TAAACTTTTGAAGGAAAGGGCTTGGTGCCAGAATGACATTACGGAGTTAT
ATGTGCACGTTTACGTCTTCAAATTATGATTANGGACAGGGCTTGGTGTC
AAAAAGACATTACGGAGTTATATTACGTCTTCAAATTATGATGGCCTCCC
CATGTAAGCTGGTTTGGTAAAATCTAGCATGCAGATTTACTGTTTTTGTC
GGTTATTTTGAGTTTCGAATGATTATTTTAGAATCAAGATATTATGATAT
CgaatattttagattttaactttaaatcttttaaaagaattttttacaGT
TGATGTTATATTTTaaatgttgttgttattttctaaATTATTGCTTGTTG
tagttatattttttggaattgtCATTAAAATACACACAGTTTGTGTCATG
AAAAGCCTACGGAat
Run BLAST on NCBI

transcript from alignment at sc0000458:47480..56675+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023676 ID=TCONS_00023676|Name=TCONS_00023676|organism=Clytia hemisphaerica|type=transcript|length=9196bp|location=Sequence derived from alignment at sc0000458:47480..56675+ (Clytia hemisphaerica)
AGCAGAAGCAGGCAGAATAGAGGACTTTTGAAAGATATTGGACTTTGTTA GTTCAGTTTTTTAACTATCAATAATATTTAAAAAGCCACAatatagtaag taagtaaaaTTAGTTACTTAGGCTCCCAGGGGGGTTATTGCTTgtgcaaa aatgggtgctgggtacaCGTGCGGATGATAAGTCTCTTTTAGAACTTCAA AGtagtccctctaagggtcggaaaattcacttttttgatttcgagagaaa aaattgtaaaaaagtctcactTAAGGgtaaactattttttcaaaaaccga agaaaatttttcaaaaaactctctCTAAGGGGCACTTTTTCACTAAGAAT TAATTTGTCTCTCttagggtcggttttcggaggtcccgtccgcacatacc ccaaCCTTAGTACTCTCGGGGCACATACCATAATATTTCTGACTTGTGCT TGCAATCTCTATGTTGCTGGAGGTTAGATTCCACTTCCCGGAGTAATATT CCACTAACTTTTCCGGAGAATCTCCGCTTTTTTTCCCCGGGATAACTGAT ATGAGATTAGAAAGGGTGCCCTGGCCACTAGAGAATGAAATCGGACATAA AACCTTTATTTCGTACTGGTGTACTTCGactgtttaaattttaaactttt taatttgttttgacAATAATTACGCTGAGTGATGACTTTAAAAACTTTCG ATGTTTTTGCGTCCACTTAATTAATTGTTGTACGTGAAATGAAATGGGTG aaaacacactttttttataagatctaGTAATTTTTGAGCTtaagattgtt cttaaatttctaTTGTGCGAAACAATAGAGCTATTGTTCTGAGGGCCTAA ATCTGAGACTGGtgttcttttaaaagttttcttataaatataAAACGTCT ATTCTGATTCGAAAGTTTACTgatcgattttttttttatctgcTTATTTT TTTGATCTGCTTATTCTTTTGATCTGCTTATTTTTGGAATCATCTCCAAT AATTTTCTGATAGTATTGTTGGCTGTTTCCCATTTGATGTTTCTGATACC ATGTATCGCTATAAATAGAAAGAAAGTAGAAATTTACAATAGTCCGACCT TTATCATATCCCACTTACCATATGTGTGAGTCGGAGGCAAGATTTTTGAC AAGTTTTTTAATGGGGTTTTAGAAAGAATTTTACAGTTTGAGTActgtag tctacacaatagacagctccaggcttttaggccttgcTCTTGGTCTACAG gtaagatatgacgtagcctagagTACTGTAGTTGactcatatttttttca aaccagAAAGTCTTTATTTTACACCTGACTTCTTTTTTCAGATCTCTGTC AAGTAAAATACACTCGATAATACACAAAGATGGCTTTACAAAATGGACAT GCCAAGAAACAAGACTACatcaaggttaaaaaaatttcatgattttatgT TGTCGAAAAAGTATTAAAGAGATGAAAATTGAGGAAGTTTTTCATGAATA TATATCATCAAGTCTCTGATAACATTATTTAgctaattttcataaaaatt ggcAAAAAGTCTTTGGGTAAAACGACACAAAGTGAAACActtccttttat ttttgttcctcAAACAAGGGGTCTTATGATtttagaccttttgctagtta TGTTAAGATAGATGTCATaatgaataattaaaaaatccTACATCAAAAGC ATTGACATATTAATGCAGAGGTCTATTTCTCTAGAGCTTTTGCGGCTCTA ATGCTTTTTGCGTCCTTCTGTAAAACTCTAAAAAATGTGTCGTACCTTAT TTATTAGATTGGTGATGAATTTACAACTTATGACCCAGACCTTTTCATTC TTCCAAAGCATTACAAAGATTCCATTGGAAGTGTATTACTACCCCATGGA TTCATCATGAATAggtaagctctagtttagacggccgactttctgccctg cctattctaattgttagagaaTAGTGGGCAGAAAGAGggtgttaaaatct ttgcttggaaacgtttgaaagaaaactttgCAGTGACGGTCATAAGAGGG TtttgcattgactttagacagcccgcTTTATatccactttaattcacaat tagaataggcagggcaaaaagtgggccgtctaaaatTAGAATTAATCTCG TACTACTTGCACCACTCTTTGAATTTACTGGTGAATGTGatacaatagcg agtttatgtatgtgtgtttttcagcgacgaagacggtaaggttctaattt gactagatcatgaccaactgaggacgacggtaaatcagcacttttaccgt cctcgattttgcggggcagaattgcgggtttttccaaatcgcttcactca ctttaccgtcctcaaaagtgcaaatacataaactcgctaatctTTCGTGA GcgtatcagaatcataaaaaaacgaacaaagGGACTAGTTTCGAGTTTGC TCCAAAACATCTTCTGAAACTTTTAATGTTGTTATATTCTTCAAAACATC TCTGTCGCAACGGTGATGacacagacccggtagaatttttcagccagtgg ggttaaaaataacggactaaacacaggaaaaaatcaataaatcacaCGTG CGTGTGAAAACCAACATTCCTGCACAGAAATTTTCAGTCGGCGTgtgatt tttagaattttcagtTTGTGATTTTTTCTAAGCTTTGAGGTCTTGGGATA TACGTATTTCACATTTGGGAATTTCGGCATGGATAAACACACGcgtggtt tttccaaaatcacacgACGACTAAGTCAAACTCATTTAACCTCGAAATGA AGAACACACGTGTGTTTTCAAGAATAACGAATGTCTTTTCTCCAAGTAAC AAGCAAATCAACACACGCGTAACTTTTCTAAAATCACACGACGACTAAGT CAAACTCATTTAACCTCGAAATGAAGAACACGCgtgtgttttcaaaaata aacacaCGCGTGTGTGGttaatctaaatttttttggaTACTTGATTTCAC GCATGTGATATCCAATTTCACAGCTCAAAAGATACGTTTGAGTGTTTAGT GTTTCCCACTCGTGTGAAAGTTAGcaaaatcacatgcgtgtgattCGCAT AAGAAATAGAAATTTCACAATTTGTGATTATTGAATTTCACACGCGTgtg atttgatgattttttcctgtgaaaactcgatagggattgatatttccatg ttTTTTTATGACTGAGGATATGAATTGAATTGTTTTCGAACCAGCAATGT CAGTAgggatggaaaaaattgcaaattattTGCAGTGAGGGTTTGattat atgattatttttactgGGGAAAAAAGTTAGAGTATACTTTTTCAATAGTT ACAATatgatttccaatttttctaaTGAGAAGAGGTCCCAGTGGGTTTGT GAATAGGGGTGTGGGATGCGAAGAACCAAATTTCGATTGAGATAAAAATT CGTCTATTTAAAAAGCGTGGATTTATTCTATCATTTACAGTCGCACAAAT ACAGTGAGGCTCTTCGAAATTTCGGTTAATTTTGCAATATGGCAATGAAA TTTCTAGATGTTATTCGAACGAATCAATAATCGAACTAAATTGGCCGTAA TCGATATTATTTATTGAGACTCAATACCGTTCAACTATCAGATTATaagt ttttttatcacattCGAATTTGTTTCATTGTTTGTCGGTTCTATTCGATT TAGCGGAATTCGGAAGGGTGGTGGGTTTAATCAACGGTCAGCGCCAACTC AgcgaatgagtagcttagattagGTGATCTGATCTTGGTGGTAAGTTACT GGGTGCTGAGAGTAGGTGTAGCGCTTACTTTCTCCGACGCATTAcgtcat gatattcatgacgtaatgttttctacggaaagccagtagtggcaaatttt aaacaacttttgtctagttttaagttgccactactggctaaaaccggggt atttctgtaaaaaacattacgtcatgaatatcataaatttcttatacatt cATTCCCATTCCATAGGATCCAAAGACTTGCACAGATGATTTTACAAGAC TATGGAGATGAATCAATCACATTGCTTTGTGTACTGAAAGGTGGATTCCG ATTTTGTCAAGATTTAATGACCAGTATTGGGGAACTCAACAGAAGTGCAG GTAAATGATTTCATTCATGATATGAAGAAGTGATTTTTACTGCGATTCAG CCTACCAGAAAGAATCATCGACTACCCGAAACGAAAAGAAGCCATTCTAC TGCTTATATTCAATTATTGTATCTTAAGGCCGGCCTCCACTTAAGCGCGC TGCATTCGCACcatttggcttcaatcctttttgcttggaaaaaagattac gtcataaaaatgtagcgcgcgctggaaaaaaaagttgaatgcaTCGCGCC Aatagaattgcttcatttttcttttgaccaatagcgtggaagctttgcta gataaagtgcgatcgcagcgcgcgcaagtggagaccggtctTTAGTTATA AAACGTCCGGCAAAAGGTGGGACCGACTTTGTATAAATCAAAATCCTTAT ATGCTATATAAATGTATAATCTAATGACTCgatttcttttgcaaaaaaaa catctttaccTTTTGTTCCTTCTAGAAAAATCACTACAAATGAATATCGA ATTTATCAAAGCTAAAAGTTACGTTGTAAGTGTacttaaaaattctaaaa cttcAGTTCCTAACTAATTCAGCTGAACATATGATTATTACCATGTGTAC CCTTAAACCCACCCAGGAAACCTAACCAAGAACGCTCTTTGGTTGTGATA GGGCTATAGGACACAGACATTTCTTGACTACTAACGACCGTAAAAATTCT GAATCTTAGTTTAGAAGAAAATCTCTCGGAGATTTTCCAACTCTAGTCTG AATCTTATAAGACTTCCTATAAAAAACTCTTTTCGCtggaggatgagcag aagcctagccCAACTTTAATAACTTCTGTTTGTCAGATCATTTCCCTGCA AGCTGTAAACATTCTTTAGATAGCATTTTCTGTTATTTTACAGAATGACC AACAAGGAAGTATTATGATCTCATCACATGGTTCGCCGCTAAATTTAGAG GGAAAGAATGTCTTAATTGTCGAGGTAATTAGAAATATTACTGTTTCGAG GTTCGTTATTTTATAAGAAGCAAAGTAAAGCTGTGTCAGTTTCTCTATAG TCAAATTTCCAAAACATGTCGCTTTTCAAATCCCTCGAAACGGCAAAATT GATAAGCAAAATTCGACCATTTTTGCATAGATTCTCAAGACGTTGTAACA TTTTGTAAACTCATTCAATAAAGAGCCTTCTTAAACTTGTTTGTGACCTG TAATCAACAATTTACGCCAGACCTGTATTCTGGGGGTCACCAGCATTCTG GGGGGAGGGGTCCACAActttaatttagaaatttctCTTCAAACAATCAA TTCTTTCGGAGAATTATTTTATGAGAAGGAACTTTAATGGATACCCTGTC TTTGTGTATAAATTATACGTACACTTTTTACGGGACACACTCTAAATGAC TCACATTagagttttgatgtgtttttGAATCTTTTGTAGGATGTAGTTGA CTCGGGAAGAACGAtggaaaaattgattgaaaaagtgTCAGAAGACAAAC CAAAATCATTAAAAGTTGCAACGTAAGTGTCTTTGTCTGCTATAACTGGT TCTTGATCTCGTGCATTCGCGCAATTTTTTCCGAAATCCACGCAAACTTG GGTTAAAAAAGCAAATCCACGTATCCCCGTGAAAAAATTGCGCTATGTAC GCATTGACGGCGCTATATAAGTCGTTTTTAAGGTTCAGTTGCCTTCTTGC ATACCTATAAGGAGGGGGGCTATGGAAAGGGAACCTTCTGGTCGCCCTCA GCTGCGGTCGCGAACTTTCTTCAAAGAGTTGATTCCATTTAGCTGGTAAG TAGTGTGTGGGTAGTGTGTTTTGTAATATAATGATCTTTGTTTTAGACTA TTgctgaaaagaaataaaaattcaacGGGATATAGACCAGACTGTAAGTA AAATGACGTTTAACGCTAGTCGCTTGACTCTGTTAATGACCTGTCTTTCT AACCTCTCTCATTCTGTGCTAAAAAGTCTCCTGTCAGTAATTAGATTATC TAAAGAATGAGACACCGGCATTTTATATTGGACGCTTGGGACTAGTCAAA ATGCTACTTTTTAATACAAGCTGGATAGAActaattcttttaaatttcaa actttttttcataaaaaaaaacttttataaaattttcagaTACTCATact caaaaaaaagaaaaaagttttcaacatTTAAGCTCAACTTCAAGCAAATA TATATCAATTCAAGATTAAGTTTAGCTGGGCCAATCTGTAGATACtagat atttcatttttgaagtATTCTCCTCGTGGTTATTTCATTCTCTACAAAAC GGTAAAGCACATGTAatgttgttaaaaatattttaaagttatAGCAAAGT TCTCAACTTAGGACTTGCTCCCTCCCTACTTGAAATGCGACAAGACCAAT TTATCCAAATAGGAGAACATAGTAAATTATTTTTAACCGTTTGCCCATGT CATGGCCTTCAATAAATATTCTTTAAACTTGTTTTTCAGATTTGGGCTTT GAGATTCCAGACACTATTTGGCTCATTGGATACGGTGGTTTCGTGagttt taatcttttttcactGTGATCCAGGACttgtgtcccgaaaaaagggAACC GGTTTTTAtctaaagtaaaatcctcataatttatgcaaaattctATGACT TCTATACTATTACATTCCAATCTTGATAatctattcaatcatcttgggaa ttATATCCAGTTACAATGACAGGTTTtaaggattttactttatataagaA TTTGTCCGTTTTTTTTGGGGACACACTGTGTAAATTTTCTTACGATTGTT ATATAAAGCTACAAATGAGAGCTCTAATAGATTCGCGCACGCGTATGAAA AGTTATGAAGGGGAAAACTTATGCTAAGTATGTACGTATGGATGTCGCCA GCCAAGACCGAGATACCTCGGGTGAGTTAAcgaggcatgtcccaaatata ttttgcgtgacgcgcacagcttcccattattccttaactctctctcatat atagctcaaaacaatcgtatcaacgagaggatttcgaaaagtgctgggtc aaaaatttacattaagtCAATCTGaagatatcggtcaaaaactgattttg acgttataaaatacatcgaaaaaacccAAACCGAAATTACATCACATTTT ATCCTCGAACATCCCTAATATAAAATGGTATTTCAATCAATTGTCAGAAA TAGTACTAACAATTTTCTCCTCTTTCTGTTACCTTTGGTTCAAAACCAAG GGGTTTGTGTCAAATGAATCACCACTCTTCCTATAAATTagtcaacaaaa aataatggcTATTCATACAGCAAAAATTTATTAGgaaaattccgaaaaaa tcCCAGATAAAAAGAGCCAAAAccaggaaaaaacatttttcggctcaggt aatgcttagcatatgcttaaatttttgccatatctgagcctagatatgct tataaaatataactgcaatgcttataaaaaacatgtatgtcaAATAAAAG TACCCTTCAAGATTGACCTCAAACTCATACAAACTGTTCATGGTTCATAA AAATCTTTACCCATCTGGATGTCAAAGAATAACTGATTTTCAATATCCTG TTGAATGGTAACCAACATGTTGGAGAAGAGCTTACATGGACCCTGTGCGG AAAAGTTATTGTAAGGTATCTTTAGCCATTGCAAGATTACTCCTTGCTTG CATAGATTTCAAGTTTCCCTTCATCAATGGTTGAGCCTTGTATAgcattt ctttgattttagcGAGGTAGTTACTTAGAGaggttttgttttctttttgt agGATTACAACGATTATTTCAGAGATCTTGATGTAAGTCCATTTTAATTC TCCAGTGTCTTCTGCTGTTCGTGATACTCCTACCCCTGTTTATGTGACTG TTTATGTGACTGTTTATGTGACTCGgtgaaaaactttttgcaaCGTTGTT TGAATAAGCAACCCCAATTTTATGCTCGAGTCTTGAGTTGCTAAGGATTT TCCGTATTTCAGCCAAAAAGTTGGTTATggattttgagccaaaaatgctT AGCAACTTCAATTATTTTAGCTTTTTATCTGAGTTAATGTCCAAAATACC TTAAATAGGTTATTCAAATACCATCGGTATACATTTTGATGCCAAGTTAT ACTGAAAATACTtctttaaaaatacttttttaggtatttttggTTGCTTT CCCGGTCTATACTTAGTTTCAGGGCTAGGTTGCAAAGCCAAGTTGCTTAT TTTTTGGCAACTATTAGGGTCCAGCCCTTAGCGATTTAAGGGATTTAATT TAAAGGTACTTAACTTGGTCAAAcagctttgttttgatttcaaaactcAT TGACACATTACTGCTGCTACTATTTCATAAGTTTAGAAACCCTCTTGCAT AGGTCATTGACATAAAACGACATTTTGAAGTGTACTCTTGTTTTGTCAAC AGAGAATCATGTTATTGATCAACTGTTTATTTTGGTTCCCGTTTATAGCA TATTGTTATTTTGAATGAATTCGGACGCAAGAAATACACGAGATGATATT GTACATTGCTGCCCAATTGCGCAATACCTGGGATCGCGGATTATTTGGAA TTGCACTATTTTAACTTGCTTCGTATAGTATTAAACTTTTGAAGGAAAGG GCTTGGTGCCAGAATGACATTACGGAGTTATATGTGCACGTTTACGTCTT CAAATTATGATTANGGACAGGGCTTGGTGTCAAAAAGACATTACGGAGTT ATATTACGTCTTCAAATTATGATGGCCTCCCCATGTAAGCTGGTTTGGTA AAATCTAGCATGCAGATTTACTGTTTTTGTCGGTTATTTTGAGTTTCGAA TGATTATTTTAGAATCAAGATATTATGATATCgaatattttagattttaa ctttaaatcttttaaaagaattttttacaGTTGATGTTATATTTTaaatg ttgttgttattttctaaATTATTGCTTGTTGtagttatattttttggaat tgtCATTAAAATACACACAGTTTGTGTCATGAAAAGCCTACGGAat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013297XLOC_013297Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023676-exon-sc0000458-1491911889:47480..47578TCONS_00023676-exon-sc0000458-1491911889:47480..47578Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:47480..47578TCONS_00023676-exon-sc0000458-1510915933:47480..47578Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:47480..47578TCONS_00023676-exon-sc0000458-1575043694:47480..47578Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:48821..48903TCONS_00023676-exon-sc0000458-1491911889:48821..48903Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:48821..48903TCONS_00023676-exon-sc0000458-1510915933:48821..48903Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:48821..48903TCONS_00023676-exon-sc0000458-1575043694:48821..48903Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:49287..49393TCONS_00023676-exon-sc0000458-1491911889:49287..49393Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:49287..49393TCONS_00023676-exon-sc0000458-1510915933:49287..49393Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:49287..49393TCONS_00023676-exon-sc0000458-1575043694:49287..49393Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:51496..51629TCONS_00023676-exon-sc0000458-1491911889:51496..51629Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:51496..51629TCONS_00023676-exon-sc0000458-1510915933:51496..51629Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:51496..51629TCONS_00023676-exon-sc0000458-1575043694:51496..51629Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:52105..52154TCONS_00023676-exon-sc0000458-1491911889:52105..52154Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:52105..52154TCONS_00023676-exon-sc0000458-1510915933:52105..52154Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:52105..52154TCONS_00023676-exon-sc0000458-1575043694:52105..52154Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:52523..52603TCONS_00023676-exon-sc0000458-1491911889:52523..52603Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:52523..52603TCONS_00023676-exon-sc0000458-1510915933:52523..52603Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:52523..52603TCONS_00023676-exon-sc0000458-1575043694:52523..52603Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:53069..53151TCONS_00023676-exon-sc0000458-1491911889:53069..53151Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:53069..53151TCONS_00023676-exon-sc0000458-1510915933:53069..53151Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:53069..53151TCONS_00023676-exon-sc0000458-1575043694:53069..53151Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:53476..53522TCONS_00023676-exon-sc0000458-1491911889:53476..53522Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:53476..53522TCONS_00023676-exon-sc0000458-1510915933:53476..53522Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:53476..53522TCONS_00023676-exon-sc0000458-1575043694:53476..53522Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:54119..54171TCONS_00023676-exon-sc0000458-1491911889:54119..54171Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:54119..54171TCONS_00023676-exon-sc0000458-1510915933:54119..54171Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:54119..54171TCONS_00023676-exon-sc0000458-1575043694:54119..54171Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:55432..55461TCONS_00023676-exon-sc0000458-1491911889:55432..55461Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:55432..55461TCONS_00023676-exon-sc0000458-1510915933:55432..55461Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:55432..55461TCONS_00023676-exon-sc0000458-1575043694:55432..55461Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1491911889:56128..56675TCONS_00023676-exon-sc0000458-1491911889:56128..56675Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1510915933:56128..56675TCONS_00023676-exon-sc0000458-1510915933:56128..56675Clytia hemisphaericaexon
TCONS_00023676-exon-sc0000458-1575043694:56128..56675TCONS_00023676-exon-sc0000458-1575043694:56128..56675Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000458supercontigsc0000458:47480..56675 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.514207 0 1.3371 0.800496 0 0 0.446858 9.89859e-10 0 0.0798258 0 7.67257e-06 16.7813 15.9955 1.73093 0.800807 37.1663 36.0119 38.6655 33.4024 79.7376 77.7759 32.9399 35.9909 118.038 83.5751 40.5326 60.566 94.397 78.424
Blast
BLAST of TCONS_00023676 vs. Swiss-Prot (Human)
Match: HPRT (Hypoxanthine-guanine phosphoribosyltransferase OS=Homo sapiens GN=HPRT1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.998e-64
Identity = 100/217 (46.08%), Postives = 149/217 (68.66%), Query Frame = 3
Query:  159 AKKQDYIKIGDEFTTYDPDLFILPKHYKDSIGSVLLPHGFIMNRIQRLAQMILQDYGDESITLLCVLKGGFRFCQDLMTSIGELNRSAEKSLQMNIEFIKAKSYVNDQQ-GSIMISSHGSPLNLEGKNVLIVEDVVDSGRTMEKLIEKVSEDKPKSLKVATLLLKRNKNSTGYRPDYLGFEIPDTIWLIGYGGFDYNDYFRDLDHIVILNEFGRKKY 806
            A +   + I D+   YD DLF +P HY + +  V +PHG IM+R +RLA+ ++++ G   I  LCVLKGG++F  DL+  I  LNR++++S+ M ++FI+ KSY NDQ  G I +        L GKNVLIVED++D+G+TM+ L+  V +  PK +KVA+LL+KR   S GY+PD++GFEIPD  +++GY   DYN+YFRDL+H+ +++E G+ KY
Sbjct:    2 ATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDK-FVVGY-ALDYNEYFRDLNHVCVISETGKAKY 216          
The following BLAST results are available for this feature:
BLAST of TCONS_00023676 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HPRT1.998e-6446.08Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
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