TCONS_00023324 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023324
Unique NameTCONS_00023324
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2812

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023324 ID=TCONS_00023324|Name=TCONS_00023324|organism=Clytia hemisphaerica|type=transcript|length=2812bp
CCCATTGCGTCGTAAGGCGGTCGGTGTACCTGCTGTAGCTGGTGCGTTGT
ACGTTGTACCTTTTCAATCAgcatttattaaaaattctttttccatCTTT
CTTAATCCTATCTCTATTATGTATGTTTTGACTTTACTTGAAAATAATAa
agatacaaaaataaaaaacaatgtcTGCAATGCAAAGGGATATCATGAAA
AGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAAGATT
TTCAAGTCTTGTTCCAAAAAGAAATGTCAAAGATTACTCCCCATCCTCAT
GGGAAGGATATTTTGATAAACAGCATGATGTCAAAGTTGGAGAGaatACA
TTTAGGTTATATACCAGAGGTACAGATGGACCAGTAGTCTTACTTCTTCA
CGGTGGTGGACATTCAGCACTATCATGGGCAGTCTTTACGAAAACCCTAT
GTGATATGTGTGATTGCCAAGTTGCTGCTATTGATTTTCGAGGTCATGga
gACTCAAGTACAACCAATGATACCAACATGGCAGCTGATGTAATGGCTTA
TGATATCTGTCATGTTATACTGAATTTCTATGACCAATCACCACCTCCAA
TTGTTATGATGGGCCATAGTATGGGAGGTGCAATCGCTGTTCACATCGCT
GCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTATAGATGTAGT
GGAAGGGACTGCACTAGATGCACTGTCTTCAATGCAAAGTTTTCTTCGAA
GTAGACCTCAGAAGTTTAGTTCTCTGAAACAAGCTATTGAATGGAGTATA
AGGTCAGGGCAGCTGAGGAATCTTACTTCTGCTAAGATATCAATGGCAGG
GCAACTAAAAAAGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTATCCT
TAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAACCTCA
TTTTCCTCAACATCAATAAGCGAGGAACAGTCAGAGTATACTTGGAGGGT
CGATTTAgcagaaactgaaaaatattgGAAAGGATGGTTTGAGAATATGT
CATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGCAGGA
ATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAGGGAAATT
TCAGATGCAAGTTCTACCTAATTGCGGACATATGGTTCACGAGGATGTGC
CAGATAAGGTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTG
ACTGTGGCTAAAAGCAATTTTGAAAGacacacACCATCTTGCTGACATAT
TCTGGTTcatgttgttttatttttttcaaactttataaaaattgtacata
gtaaaaagatttttaagttattttctaaaatttcctaaaattaggTATca
tcttttctcttctttttctcATCAAACTTTGCCCATGCATTCTTTTGTCA
GTTATATTATATTCATGTTGTTAAATCccattcctttttataatagaaaa
GATAGAAAAGCATAATTGAGTAAAATGGCAGCGAAAAGGAAGAAAACATC
TGATGGAAATAGCAGCACAACAAATAGTAATAAGTCACTGACCGCAACCG
ATGAtattgaagattttgaaaacgagagTGATCCTTTCTCCAAACCATGG
GAAGGATCTGATGCCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCA
TTCCAACATGCTATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATT
CTGGTTATTTCAAAGAATCGAAAACTAAAACAGTTGATTTGAAAGGCAAA
AAATATGCAGATGTTGTGAATCTATTGAAAATGATATACCCTCAATTTGA
AATTGACCTGTGGATGACAACAATATCAGAGCTTCAAGTGATGATGACAC
TGATCGAAGAATACCTCATCAAATCATTACGTAAAAGAATTGAAGACCAC
ACCCTCTACATTGCCAACATCAAAATACTGAATGGTGGTTATCAAGAAGT
TTGTGCATTGGATCTGATGTTACTGGCAGATCTGTTTAATTTCAATGATA
CTATAGACCAATGTGCGAAATATATAGGTGCTCGATATTATTATACTGAC
CATTCCAATGAATCGACTTTTTCTATGGATACGGACGATGAAGACACCGA
GGACAGCCCGTCAatgaaagaatttttccaagtccATAAATTAACAGATA
AAGCCAAATTAAAAATCATGGTCAACATTGGTAAGAAGCATTTAGAGTTT
ATTGAAGAGGAGAGAGATGATATGTATAAAGAAATGATGACTAAGCGAAC
GCGCGAACATTCCTATTTGAAAAGTGAGATGTGTCGCAGGAAAATGGAAG
ATTTGAAGATAGTAATGAATGAAATGACGTTATTGATTAAATGAAGATTA
ATTGGTAGGTTTACTTTTATTCAGAGAAGCCTGTTCTTTATGGTGTTTCC
ATCTTCAACCTTATGTTGCTTTCTTTTAATCGAACGAAATTGTAATGATA
CGTTTTTGCTTTATCTgggtaaaaataatttgaaattattttgcaaCCAA
CTATAACATAGAAAACGTGAATCATGGAATTCAATATAAATGCAGTATTT
TGATgagaaggaaaaacaaattgatGTGAACAAATTCTTAATTTATGAGA
CAATGCGCAAGGAATCATTTTACGATCAATCAATCTTTGCTTAATTTAAA
TGGTGTTTTTGTTGCCTATTTATGGGctgttttttatttcacttttgtAT
ATGATATTTTTGTATAGGCTTTTTGTAAACTTAGTAATCATGAGATGATG
TATATACAAGCA
Run BLAST on NCBI

transcript from alignment at sc0000450:248187..258271-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023324 ID=TCONS_00023324|Name=TCONS_00023324|organism=Clytia hemisphaerica|type=transcript|length=10085bp|location=Sequence derived from alignment at sc0000450:248187..258271- (Clytia hemisphaerica)
CCCATTGCGTCGTAAGGCGGTCGGTGTACCTGCTGTAGCTGGTGCGTTGT
ACGTTGTACCTTTTCAATCAGCATTTATTAAAAATTCTTTTTCCATCTTT
CTTAATCCTATCTCTATTATGTATGTTTTGACTTTACTTGAAAATAATAA
AGATACAAAAATAAAAAACAATGTCTGCAATGCAAAGGGATATCATGAAA
AGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAAGATT
TTCAAGTCTGTAAGTTTTTGTTAAAAAATTCTTGAAACATATTTTGATGT
ATTCTATGTTTAATTCTAATTCTGTCCTTTTTAAAATAACCAAATGCTGT
ATAAAATGCTACCTGGAATTATTTATCATCATCATCATGATAAGTAAAAT
CATTAACTTTAAATTTTCAGTGTTCCAAAAAGAAATGTCAAAGATTACTC
CCCATCCTCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAAGTTG
GAGAGAATGTATTTTTTCATTTTATTTCGACTATTTACTAACTTCTTTCG
TTATCTGTCGTACCTGTAAAATGAGTGACCCTGGAGACTAACCTTTGATA
AGTTCTTTGTTAGGAAGTAGTGTAAACCTGTCTGAAGACTAATGCATTCA
CTTTTAACTTTCACTTACTCACACTCCTTTAACCCTTTCTCCTTGGAGTG
ATAAGGAGTGCTATGCACAACTTTTATTAGTGAAGTCTAAATTTTATTGT
GTACAACTGATCACCATCCTCAGAGATTTTTGGAGGTGTGTCTGCGCTAA
TCCCAACCTCAAATATGCTGCCTGTAGATACAACAACTTCTCTGATAAAG
TAGATGCTATGTGTTTAAACTTAGAGCTCTAAACTCTTATCTGAATTTTC
TATTTAAAGACATTTAGGTTATATACCAGAGGTACAGATGGACCAGTAGT
CTTACTTCTTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTCTTTA
CGGTATGTTTTGAAGCTTTAGCATCTTTTGATATTGGTTGATAAATTATG
GTGGGTGAAGTAATGATAATATTAATAACAAATAAAATGTTCTTTACTAC
ACCCATTGTCCCACAAAAATTATTCTTTTTCCATCCTTTTAAAAATATCT
TGTTTAATAAACAGGTTCGATTATACATTCTCATTGAAGGTTCTTCAGAT
TGAAGATTCTTCAAATAGAGTCTAACCCAAGCACATGATCTTCTAATTTT
TAGAAAACCCTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTGATTT
TCGAGGTCATGGTAAGTTTTCAACAGGGACAAACTTTCTAGATAAATTAA
TGAATCTGTATAAAAACATTATGGCAAAGCATTTTTATGACTTTTGTTAG
CTCATCCTTTGTTCCAAATGGTACATTGCTTACTTTTTGATCTTATTACC
ACATTCCTTAGTTTAATACTCTTATCAATGATTCTTTGGTACCTAATAAA
CAGGGAGGGGTTGGAACAATTGGTTTTTGTGGAAAGAAATTGCAGCAGGG
TTGGAATAAAAATGTCTTCGGATTTCCATTAATTGATAAATAGGAAAAAC
TTGATAGGTCTGAGAGTATTGTTAAAAAAAGTGAACAAAGCAAATTTAAA
AAAAACTTGAACTTTTTAACAATAGAAAATTTCAGACCAGAGATTTATTT
AAGGTAATGTTGATAAATATTGAAGCATCGTTAGAGCTTTTGATTCTTAT
TAATAAAATCTCTTGCTCTTAATCATCAGTGAACTATTTTCTTGGTTAAA
ATACTTGATGTGAGTTCTCACTGTTTCTCACTTAGTTATTGTCTTTTTTG
TTTTTAGGAGACTCAAGTACAACCAATGATACCAACATGGCAGCTGATGT
AATGGCTTAGTATGTAACACTTGATGAATAAGGATAGTGATAATTTGTAA
TGTAAGGGTACAATATAATGTTACTTTACAAATGCATTTACTTCTGTTCT
TTTTAGTGATATCTGTCATGTTATACTGAATTTCTATGACCAATCACCAC
CTCCAATTGTTATGATGGGCCATAGGTATGTGTAAGAATATTTTTTAATG
TAGTAATTATTTGTTTTTTTGAAACTTTTAGTTTTTTGACCTACCCCGGT
GGGGTGGAGGTCCTATAAATTAACCCATGTTCGTTCGTTCGTTAGTTAGT
GTGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCTGATT
TTTGGCACAAAGGTGCATGACCATAAACCCTCAAATGTGACGGAGCCCGA
TTTTCTAAAAAAAAATTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTTTTTTGT
ATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGTTCACTGAT
TAGTTTGATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTCTATATTAT
GTTTATTCTTCTAGCACTGAGGTAGCACACAGCTTACAAAAGATCTTTCT
TTTTCCTATCGGCTTTTTTTTTAGTATGGGAGGTGCAATCGCTGTTCACA
TCGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTATAGAT
GTAGTGGAAGGTTGTGATTTTTCTTTGTTATTATTTGTAATTATTTCAGA
CTAATTTTGCTAAGGAAGCTTTTGAAAGTACGACTGTTATTTCAAAATCA
GCTTTTTAAAAAAGGGGTTATTACATTGGTCATGCCGTGTACACTTATAT
CATGATTTATTGGATCGTCTGATTTATTGGATATTTGTTTCATATAAGTT
TTTTTGACATCCATCAATTACATCAAATCTTTGAAAAACTGGACATGTAA
ATCTATCGAATTCTTTCCCAAAACGAGATATGTTTCCATGTTATAATGTA
ACAAATCAACTTTTCATCCAATGAACTATGTTCAGTATTGTTTTATGTTT
AATATTGTTTTAACATCTAATTTTCATTCAGGGACTGCACTAGATGCACT
GTCTTCAATGCAAAGTTTTCTTCGAAGTAGACCTCAGAAGTTTAGTTCTC
TGAAACAAGCTATTGAATGGAGGTAAATGCTTTAGTATTCAAGGGATAGT
CAGACGGTTTGAGATATTTAGCCTGCATAAACGTACGTTCTGTGATCCTG
AGTAGGATATTAAACTTTGTACTTTTAAATCTTTGTACTGATAATTTTGT
CAAAAGAGTGCTTAGGTAAAATCGTAAATTGCATTTGAAAATTTACTTTA
AAGCTATCTTACAATTTCCTTTCAGTATAAGGTCAGGGCAGCTGAGGAAT
CTTACTTCTGCTAAGATATCAATGGCAGGGCAACTAAAAAAGTAAGTATC
GCTGTTAAAATCTTTGATAGAAAACATTTCAGATCTAGCAATTTTATCAA
ACCAAAGTCTTGTGTTGATAAGTATTTTGTTCCAGATGTTATATATTTTC
ATCTGATTTTAGGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTATCCT
TAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAACCTCA
TTTTCCTCAACATCAATAAGCGAGGTATATTATTCTAAGCTTTTTCACTT
TCAGAAAAATTCCCATTTTAAACTTATTTAAGTAGCAACTTTGTTTTCAT
CATTTATACTTTGGTCATTTTGCTTTTTAGGAACAGTCAGAGTATACTTG
GAGGGTCGATTTAGCAGAAACTGAAAAATATTGGAAAGGTATGGAAATTC
CTTTGCTGTTGTACATGTTTTTACTTATCGATTTTGATGATTTCAAATGA
TGTGCTGATTTTTTCTTCTCTCGTTGTAGGATGGTTTGAGAATATGTCAT
CACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGCAGGTAAA
GATTATCTGTGGCCGGAAAGCTCAGTCGGTAGAGCATTTACCTTACAATG
GTTGTTGGTACCTTCCGGTTCCTCGGTCACCCCCAACTCAGCCAGCAAAT
GAGTAGCTTAGATTGGGTAATCTGATCTATGCAGTAACTTACTGGAAGCT
GTAGGTGTGGCCCTCCATCTCAGCATTTGAACTCCCAGGTCTAGTGTAAA
TAGAAAAGACTAGACTAGATAGACTCCCTTGCTCTCGGCTCTGCCAACAG
CCACCTGATGAATATACTTTTACTTTTGTTTTACTTACCTAAAGTTTATG
CAAAAGAAAACATTAAGTCAAGAATTAAAAGTAATGTTTTATTTGCCAGT
GCAACTTTAAATGTCAGTTAACATTAATATATGGTCTTCTTTCTTATTGA
TTCAAACATGCTTTTACATTTCTAGGAATAGATAGACTTGATAAAGATCT
GACAATAGGTCAAATGCAAGGTATTTTTAGTATTTAAAATTTTTGGTATT
TTATTTATTGAAAATGTATAACGGGAAAATGAGGAATAGGGTATAACCTT
TAAGACATTGGGCAAAGGAAGAACTCTTTATTTAATGTTTTTAAAAATCT
ATGTCTTATGTTTTATCCATTTTTGTGTTTTCGCATCAAGTAATTTATGA
TATTGTGATATATCAGACAGTGAACTCGTTGGTAAAGCAGAATTAACTGG
TCCAATGAAAACTTGTGAATCTTCGTATTTTAGGGAAATTTCAGATGCAA
GTTCTACCTAATTGTGGACATATGGTTCATGAGGATGTACCAGATAAGGT
AAGCATTTGATCTCGTAAACTCAGTGGCAAAGTTCTGTCTTAAATTCAAG
CCTGAAGCTGTCTTTACAAATATGATACTTCACTTACGACGGAAACGCAT
GATTGTAAGAAGATAGGGTTAGAGGCCCAGTGCAGTGTGCCTAACTGTAA
ATAAAACTCTATAATAGAATTGACAAACAAATGGAATGATAAGATCTATA
AATTGTAAAGATGTAAGATTGTTTCCTAGAGGTCAATAGACCTGAGAAAT
ACACTTCTATAAATAAATAAATATTGTGTGAATAGTTTAAATGTTCTAGG
GTTGGTTGGTAAATTTCTTGAAGTCGGTAGAATCATGTTCTATTTCTAAT
GGTACTTTAACTTTGAATTAAATTTCTTCTGTAACGATTTTCTTAGGTTG
CAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGCCAAA
AGCAATTTTGAAAGGTAAGCTTACTTTAAGTTAATAATTAGGAACATTAC
ATGGTCCACCTCCAGTGATTGCTGGAAATTTTAACCTTTTTTTTTTTTTT
TCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTTTTTATTTTT
TTTTCAAACTTTATAAAAATTGTACATAGTGAAAAGATTTTTAAGTTATT
TTCTAAAATTTCCTGAAATTAGGTATCATCTTTTCTCTTTTTTTTTCTCA
TCAAACTTTGCCCATATGCATACTTTGTTTGTCAGTTATATTATACCCAT
GTTGTTAAATCTCATTCCTTTTTATATTAGAAGAGATAGAAAAGTATAGT
TGAGTAAAATGGCAGCAAAAAGGAAGAAAACATCTGATGGGAATACCAGT
GCAACAAATAGCAATAAGTCACTGACTGCAACCGATGATATTGAAGATTT
TGAAAACGAGAGTGATCCTTTCTCCAAGCCATGGGAAGGATCTGACGCCA
TTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCTATCT
TTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCAAAGA
ATCAAAAACTAAAACTGTTGATTTGAAAGGCAAAAAATATGCAGATGTTG
TGAATCTATTGAAAATGATATACCCTCAGTTTGAAATTGATCTGTGTAAG
TACCTTGGCCATTTTACTTATTCCAAAGTCTACATAGATTACTGATAATT
ACTGTACCTTTCTTCTTTTCTTTGTAAAACTTTTTCTTCAGATATATCTC
CTATCTGGGGTTGTTAAGATGTCTCTTAACTTTGAAACTTACATTCTTCT
AATATCTGCTCCAACAATTAAGTCAGAAAAAAGGATCCCTAACTTTGGGA
TAAAGGGTTGGCTCTAAGAGTTGGTTAGGCTGGGAAGTGAAAGAGTGGCT
ACAACACTAGCGACTAATTGACATGGACAATGGTATAAAATACTGACAAT
TCTATACTTTATTATTTAATTGTTTCTCAAGGGATGACAACAATATCAGA
GCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATTAAGTCATTAC
GTAAAAGAATTGAGGACCACACCCTCTACATTGCCAACATCAAAATACTG
AATGGTGGTTATCAAGAAGTTTGTGCTTTGGATCTGATGTTACTGGCAGA
TCTGTTTAATTTCAATGATACTATAGACCAATGTGCAAAATATATAGGTG
CTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTCTATGGAT
ACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAATTTTTCCA
AGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTCAACATTG
GTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATATGTATAAA
GAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAAGTGAGAT
GTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAAATGACGT
TATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCAGAGAAGC
CTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTTTAAT
CGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAAAATAATT
TGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATCATGGAAT
TCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTGATGTGAA
CAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTTACGNTTCTA
GGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAGGTAT
TTTTAGTATTTAAAATTTTTGGTATTTTTGAAAATGTATAACATGTTTTA
TTGCTTCTCCCAGGAAAATGAGGAATAGGGTTTTAACTTATATGAAATTG
GGCAAAGGAAGAACTCTTTTTTGATGTATTTAAAAATTTATATCTTATGT
TTTATCCATTTTTGTGTTTTTGCATCAAGTAATTTATGATAGTGTGATAC
ATCAAACAGTGAACTCGATGGTAAATTGGAATTAACTGGTCCAATGAAAA
CCTGTGAATCTTCGCATTTTAGGGAAATTTCAGATGCAAGTTCTACCTAA
TTGCGGACATATGGTTCACGAGGATGTGCCAGATAAGGTAAGCATTTGAT
CTTGTACACTCTGTAGCAAAATTCTATCTTAAATTCATACCTTTTAAAGG
CTGTCTTCACAAATATGATATTTCACATTGTGTACATTCCCTAGGGTCGG
TTGGTAAATTTCCTGAAGTCGGTAGAATCCTGTTCTGTTTCTAATGGCAC
TTAAACTTTGAATTAAATTTCTTTTGTAACGATTTTTTAGGTTGCAGAAA
TCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGCTAAAAGCAAT
TTTGAAAGGTAAGAAATCTGCTTACTTTAAATTAATTAATTAGGAATCAT
TACATGGTCCACCTCCAGTAATTGCTGGAAATTTTAACCTTTTTATTATT
TTTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTTGTTT
TATTTTTTTCAAACTTTATAAAAATTGTACATAGTAAAAAGATTTTTAAG
TTATTTTCTAAAATTTCCTAAAATTAGGTATCATCTTTTCTCTTCTTTTT
CTCATCAAACTTTGCCCATGCATTCTTTTGTCAGTTATATTATATTCATG
TTGTTAAATCCCATTCCTTTTTATAATAGAAAAGATAGAAAAGCATAATT
GAGTAAAATGGCAGCGAAAAGGAAGAAAACATCTGATGGAAATAGCAGCA
CAACAAATAGTAATAAGTCACTGACCGCAACCGATGATATTGAAGATTTT
GAAAACGAGAGTGATCCTTTCTCCAAACCATGGGAAGGATCTGATGCCAT
TTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCTATCTT
TCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCAAAGAA
TCGAAAACTAAAACAGTTGATTTGAAAGGCAAAAAATATGCAGATGTTGT
GAATCTATTGAAAATGATATACCCTCAATTTGAAATTGACCTGTGTAAGT
ATATTGGTTATTTTACTTTATTCCAAAGTGATAAATTCTGTATCTTTCCT
TTTCTTGGTAAAACTTTTTCTCCAAATAAATCACCTACCTAGGGGTCTTA
AGATGTCTCTTAACTTTGAAAAATGCATTTTTCTAAAGTCTGCTTTTCCC
TAACTCCAAAAATGAAGTCCGAAAAAAGGATCCCTAACTTTGTGAAAAAG
GGTTGGCTCTAAGATAAGAGTTGGTTAGGCTGGAAAGTGAAAGAGTGGCT
ACTGCAGCACTAGCGACTAATTGACATGGGCAATGGGTATCAAATACGGA
CAATTCTATACTTATTATTTAATTGTTTCTCAAGGGATGACAACAATATC
AGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATCAAATCAT
TACGTAAAAGAATTGAAGACCACACCCTCTACATTGCCAACATCAAAATA
CTGAATGGTGGTTATCAAGAAGTTTGTGCATTGGATCTGATGTTACTGGC
AGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCGAAATATATAG
GTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTCTATG
GATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAATTTTT
CCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTCAACA
TTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATATGTAT
AAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAAGTGA
GATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAAATGA
CGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCAGAGA
AGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTTT
AATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAAAATA
ATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATCATGG
AATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTGATGT
GAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTTACGATC
AATCAATCTTTGCTTAATTTAAATGGTGTTTTTGTTGCCTATTTATGGGC
TGTTTTTTATTTCACTTTTGTATATGATATTTTTGTATAGGCTTTTTGTA
AACTTAGTAATCATGAGATGATGTATATACAAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013112XLOC_013112Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023324-exon-sc0000450-1575043694:258013..258271TCONS_00023324-exon-sc0000450-1575043694:258013..258271Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:257764..257851TCONS_00023324-exon-sc0000450-1575043694:257764..257851Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:257270..257362TCONS_00023324-exon-sc0000450-1575043694:257270..257362Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:256961..257018TCONS_00023324-exon-sc0000450-1575043694:256961..257018Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:256363..256414TCONS_00023324-exon-sc0000450-1575043694:256363..256414Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:256197..256265TCONS_00023324-exon-sc0000450-1575043694:256197..256265Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:255212..255297TCONS_00023324-exon-sc0000450-1575043694:255212..255297Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:254750..254840TCONS_00023324-exon-sc0000450-1575043694:254750..254840Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:254481..254546TCONS_00023324-exon-sc0000450-1575043694:254481..254546Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:254248..254359TCONS_00023324-exon-sc0000450-1575043694:254248..254359Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:254084..254141TCONS_00023324-exon-sc0000450-1575043694:254084..254141Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:253927..253992TCONS_00023324-exon-sc0000450-1575043694:253927..253992Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:250776..250820TCONS_00023324-exon-sc0000450-1575043694:250776..250820Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:250435..250499TCONS_00023324-exon-sc0000450-1575043694:250435..250499Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:250164..250231TCONS_00023324-exon-sc0000450-1575043694:250164..250231Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:249478..250062TCONS_00023324-exon-sc0000450-1575043694:249478..250062Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1575043694:248187..249137TCONS_00023324-exon-sc0000450-1575043694:248187..249137Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:258013..258271TCONS_00023324-exon-sc0000450-1510915933:258013..258271Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:257764..257851TCONS_00023324-exon-sc0000450-1510915933:257764..257851Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:257270..257362TCONS_00023324-exon-sc0000450-1510915933:257270..257362Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:256961..257018TCONS_00023324-exon-sc0000450-1510915933:256961..257018Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:256363..256414TCONS_00023324-exon-sc0000450-1510915933:256363..256414Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:256197..256265TCONS_00023324-exon-sc0000450-1510915933:256197..256265Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:255212..255297TCONS_00023324-exon-sc0000450-1510915933:255212..255297Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:254750..254840TCONS_00023324-exon-sc0000450-1510915933:254750..254840Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:254481..254546TCONS_00023324-exon-sc0000450-1510915933:254481..254546Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:254248..254359TCONS_00023324-exon-sc0000450-1510915933:254248..254359Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:254084..254141TCONS_00023324-exon-sc0000450-1510915933:254084..254141Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:253927..253992TCONS_00023324-exon-sc0000450-1510915933:253927..253992Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:250776..250820TCONS_00023324-exon-sc0000450-1510915933:250776..250820Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:250435..250499TCONS_00023324-exon-sc0000450-1510915933:250435..250499Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:250164..250231TCONS_00023324-exon-sc0000450-1510915933:250164..250231Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:249478..250062TCONS_00023324-exon-sc0000450-1510915933:249478..250062Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1510915933:248187..249137TCONS_00023324-exon-sc0000450-1510915933:248187..249137Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:258013..258271TCONS_00023324-exon-sc0000450-1491911889:258013..258271Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:257764..257851TCONS_00023324-exon-sc0000450-1491911889:257764..257851Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:257270..257362TCONS_00023324-exon-sc0000450-1491911889:257270..257362Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:256961..257018TCONS_00023324-exon-sc0000450-1491911889:256961..257018Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:256363..256414TCONS_00023324-exon-sc0000450-1491911889:256363..256414Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:256197..256265TCONS_00023324-exon-sc0000450-1491911889:256197..256265Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:255212..255297TCONS_00023324-exon-sc0000450-1491911889:255212..255297Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:254750..254840TCONS_00023324-exon-sc0000450-1491911889:254750..254840Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:254481..254546TCONS_00023324-exon-sc0000450-1491911889:254481..254546Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:254248..254359TCONS_00023324-exon-sc0000450-1491911889:254248..254359Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:254084..254141TCONS_00023324-exon-sc0000450-1491911889:254084..254141Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:253927..253992TCONS_00023324-exon-sc0000450-1491911889:253927..253992Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:250776..250820TCONS_00023324-exon-sc0000450-1491911889:250776..250820Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:250435..250499TCONS_00023324-exon-sc0000450-1491911889:250435..250499Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:250164..250231TCONS_00023324-exon-sc0000450-1491911889:250164..250231Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:249478..250062TCONS_00023324-exon-sc0000450-1491911889:249478..250062Clytia hemisphaericaexon
TCONS_00023324-exon-sc0000450-1491911889:248187..249137TCONS_00023324-exon-sc0000450-1491911889:248187..249137Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000450supercontigsc0000450:248187..258271 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.2589	5.1251	5.51437	4.31836	8.55038	6.46977	7.80666	7.91944	3.89719	2.79854	2.04525	1.51143	2.00994	1.84868	2.90315	3.41233	5.4814	4.82304	1.29507	2.1673	1.70574	4.28554	8.96514	8.12045	6.72897	6.06151	6.01574	2.58083	6.70284	3.5835
Blast
[Close]
BLAST of TCONS_00023324 vs. Swiss-Prot (Human)
Match: PPME1 (Protein phosphatase methylesterase 1 OS=Homo sapiens GN=PPME1 PE=1 SV=3)

HSP 1 Score: 363.999 bits (933), Expect = 5.145e-116
Identity = 184/353 (52.12%), Postives = 248/353 (70.25%), Query Frame = 3 
Query:  264 PKRNVKDYSPSSWEGYFDKQHDVKV----GENTFRLYTRGTDGPXXXXXXXXXXSALSWAVFTKTLCDMCDCQVAAIDFRGHGDSSTTNDTNMAADVMAYDICHVILNFYDQSPPPIVMMGHSMGGAIAVHIAAKKILPNLSGLAVIDVVEGTALDALSSMQSFLRSRPQKFSSLKQAIEWSIRSGQLRNLTSAKISMAGQLKKVEGTSSQSSN------VSLDIXXXXXXXXXXXXXXXXXXXXXXXXXXYTWRVDLAETEKYWKGWFENMSSLFVSCPVPKLLLLAGIDRLDKDLTIGQMQGKFQMQVLPNCGHMVHEDVPDKVAEILTAFLLRQKLTVAKSNFERHTPSC 1292
            P R  +D+SP  W  YF+   DV+V    G++TFR+Y  G++GPV+LLLHGGGHSALSWAVFT  +     C++ A+D R HG++   N  +++A+ MA D+ +V+   Y   PPPI+++GHSMGGAIAVH A+  ++P+L GL +IDVVEGTA+DAL+SMQ+FLR RP+ F SL+ AIEWS++SGQ+RNL SA++SM GQ+K+ EG +S   +      +  +  E+ E      +        +++   YTWR++LA+TEKYW GWF  +S+LF+SCP+PKLLLLAG+DRLDKDLTIGQMQGKFQMQVLP CGH VHED PDKVAE +  FL+R +       F+   P C
Sbjct:   35 PGRK-RDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAEPIGGFQCVFPGC 386
The following BLAST results are available for this feature:
BLAST of TCONS_00023324 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPME15.145e-11652.12Protein phosphatase methylesterase 1 OS=Homo sapie... [more]
back to top