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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023275 ID=TCONS_00023275|Name=TCONS_00023275|organism=Clytia hemisphaerica|type=transcript|length=2090bp
GGATTTTCTTCAAGATAGTAGTTTTCcatttgaatttcttttcaatctAG
AATAGCAAAGAATCAAACTTTTTGGgatAATTTGATTGTGCTGGGAAAAT
TGTAATAACAGAAAAAGTTGATTATTATCTACGATGATTTCAATCGAAAT
AGATATTACCAATCGAAGTAAACTAATAAAATAAAGTGCTTTCCAGTGAC
cgtcaaaattctaaaaaagagTCAGGTTTTTTACATTGTCACATTTTGGA
TTGGAATAGTAGCGTGGAACTTGTTTCGCCATGAACAACACGAGCTTGGA
TCACCTACAAACTAACAAAATTGCTCTTCATAAATTTACCGAGAGTGAGA
AAGCCATATTTACAACTGGCTTAGCAATATTAAGCTTATTGACTTTATTT
GGAAACACCCTTGTCATTGTGGCGTTTTATAAATACCGCCCGTTACGTAC
TCGAACGAATTACTTCATTGTTTCACTCTCGGTTTCTGATATATTGGTTG
CTTTGATTAGCATGCCGGTATGGGCGGTAGTGATTATAACGGACTATGAT
AGAGCGATTCTTATTGAAAGAAAGctttTGATGATCTGGACTTCAGTCGA
TATCATGACAGGAATCGCATCTATACTCAACCTAACAACAATCACCATTG
ATCGTTACATACACGTCACACGGCCGCTTAAGCATCCAAAATTAGTCACA
CGGCGACGCGTGATTCTGGCCATCATATTAATATGGGCTTTCTCATTGTT
TGTCTCTCTTAGTAAAGGGATATTTCATGAGTTTTGGCGTCATAATAAAC
CATCTTATGAAACGATGATTGTCTCGGTTGGGTTTGTATTGCCTTTAATG
GTCATCAGTTATTGTTATTTACGTATCTACCAAGTTGTAAGAGTACAAGT
CAACAAATTCAAACACCAGACTAAACACTTAGCACCTTCTTCTGCGAATT
CTGATAAAGAAAAGACTGACGTTAAAGCTATAAAGACAATCGCGGTTGtt
attttggcctttttcttTTGCTGGTGTCCATTCTTTGTTTTGAATCTGTA
CAACGGTTGGTGCCGGTTTCATTTGGGTCCTCAAAGAAATGAATGCATTA
TAAACCGGCAACTTGTGACTGCTGCAAAATGGTTGCACTATTGCAACAGT
TCTCTGAATCCAGTCATCTACGCATGCTTCAATCGTGAATTTCGACTCGG
TTTCAAGACAGCTTTATACAGACATTTTGCTGGCCGAGATTCTAGCTCCA
GTTTCTCCAGTATGTTAAAAAGAGCATCCATCAAGTCGTATTTGTATGAA
GTGAATGGCGTACCACATAACCTTTTATCGGATGGGAAATCTAAAAAGTT
TCAAATGCAAGCGTATGATGTTATAATTATGGATGATATTGAGCGTCGGA
GCTCTTGTACTAAACTCCAACCGTGGATGCAAGatttatgaatatttttt
acttgtCCCCAACTAATAGGATGAATTTTCGTGGGGACTTAATTACGTGA
ATAATTAATAACTACCAAATCATGCATGATGTTTGTTGAAACGCCCATTA
TTAGCGTTTCTTTGATGCCACAACCATGGACAAAATACTTCAGACAAAGG
GGATTGCTTTCCCGgggaaattttaaacaccataaataatttttaaatac
cttTATTGGAAAGAAGAGTTTTACCTCTGaattttaacatgagactttaG
GATAGGACCTTAGAATTTAAGGattcaaaagctcaaatttgctcgaataa
ggcttctcaggcattttaaggtttgtccaaattttccgtaatttttaaac
accaatagcactcgccaagaggtgttcattcatacctttttggaagcgta
ttagggtgtagaatatgaaaagtgcttttcgataattgttttgtttgcct
aaataaagatatatggataaataatgcaaaaaatgtaaaaacgctgacgt
cagcaaaacttattttttaaataacttttgattggcttaattttagatgc
tgaaattttgcagaatgcaAGAGAATATTGAAAAGCACATTTTGGATCGC
ATTTGggatatagcctagaaaccatcGAACCCTTCtgaaa Run BLAST on NCBI protein sequence of TCONS_00023275-protein >TCONS_00023275-protein ID=TCONS_00023275-protein|Name=TCONS_00023275-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MNNTSLDHLQTNKIALHKFTESEKAIFTTGLAILSLLTLFGNTLVIVAFY
KYRPLRTRTNYFIVSLSVSDILVALISMPVWAVVIITDYDRAILIERKLL
MIWTSVDIMTGIASILNLTTITIDRYIHVTRPLKHPKLVTRRRVILAIIL
IWAFSLFVSLSKGIFHEFWRHNKPSYETMIVSVGFVLPLMVISYCYLRIY
QVVRVQVNKFKHQTKHLAPSSANSDKEKTDVKAIKTIAVVILAFFFCWCP
FFVLNLYNGWCRFHLGPQRNECIINRQLVTAAKWLHYCNSSLNPVIYACF
NREFRLGFKTALYRHFAGRDSSSSFSSMLKRASIKSYLYEVNGVPHNLLS
DGKSKKFQMQAYDVIIMDDIERRSSCTKLQPWMQDL Run BLAST on NCBI transcript from alignment at sc0000449:218317..223784- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023275 ID=TCONS_00023275|Name=TCONS_00023275|organism=Clytia hemisphaerica|type=transcript|length=5468bp|location=Sequence derived from alignment at sc0000449:218317..223784- (Clytia hemisphaerica)
GGATTTTCTTCAAGATAGTAGTTTTCCATTTGAATTTCTTTTCAATCTAG
AATAGCAAAGAATCAAACTTTTTGGGTAAGTAAGATATTCCACTGGGCGA
AATAAAATATTTCCAATCCTGGAAATATCTTGAAAATGTGATATTTCCAT
ATACATTAGTAAATATGAAAATATGACTTTTTCTTTATTTCCAAATCTGA
AATTCATTGAAATATCATGGGAACACCCCCATGATATTTCAATGATTTTT
CCATGGGGGTCCGCTGGAAGATTTGACCAAAATTTCGACCCCGCTAGGAA
ACTGTTATTCCTCTGAGAGAAAACAACTTACAACAGGGTTGTGAGACAGA
CAGTGTATATATTTAGTGACTTGTGGTTAAATAAAATATATAGTTGGATG
GAAGGAATAGCAATTAATTAATTATCAGTTTGCTGGAATTTAAAAGGGTC
CTTGAACTTTCAAACCAACAGGACCGAATTTTTCGAGTCTTTAGAAATAT
TTTGAGTAGGGATTGGTAGGTAAGAATAGTTTTGCCGCAATAGAATTAAT
CAAATGTTTAAAACATTATTGTTCTAAGTTGGCCCTTCATCTTCCATCCA
ACAGATTTGATACAACCGGTGAGAAAATAACCTGAAATCTCATTTCCATT
GAAAACTAAAAAAGACCTACTGTGACTTTATTTTCGGAATCCATCACGAT
TTGGCGTGTTTCTATTTCTTTAACTCTGAGTTTTAACATGAGACTTAAGA
CTTAGGATCCAAAAGTTCAAAAATGGTCCAATAAGGCTCATAATATAGCC
TGGAAGTCTATAAACCCGGGCCAAATTGAAACATCCGAGTAAATTTAAGA
GATGGCCCAAAATCGACTTTTTCGTGAGGAAAACGAGGAAATAAGCTTAA
TTCTCAAAAGATTTCGACTATGATTGTAACAACATATTGTATATAATGAA
AAATCATTTTTTTAAGGAAGTAAAGATAAGCGATAAGTTAATTCAAAGTG
AAGATTATCATTATTCTATTCTGAGTTTTTGAGCGGATTGTTATTGGTAA
TATTTTGCTAACGTAAAGAGCAATTTTAGTAAATAAAAAGGCACGATTAT
CTGTTGTGATTTTTGAACTTAATGTACATAGTGTAGATTGTATTTTCTCT
TAGGTCATATTTTAGTTATGTACAGAAGATTTTTAGTTTGCCAGAATTAA
AGTAATTATTAATCACATCTTTGACATTCTTTGAAAAACAAGCTGTGGTT
AAAAAAAAATTGAGATTTTAACGCTCTGACTGTCAGCAATGACAAATAGT
TTAATGACGTAATCCCGTCTAAAAAGAGTGATTTTTTAGATTTGATTTAA
AAACCATAGAATGTAGAAGTATACAGAGGTAGATTATGTTTACATCTTCC
CTGGGCTTACTTCCGTGGTTCAAATTCATCCTAATAGCTATTCCTTGTTT
AGACACCCCCTTCTCACAGACCCAGTAGGATTTTTTTGGCCAGTACAGGT
AAGAATAAGGGACTGAAACTCGAAGGGAATTAATATTCCCATATTTTTTA
TGGCTTTGTATTTAAATCTTATTGTTTTCAAGCCAGTGAAAAATAGCATA
AAATTTTGCACTGAGAATTGATTTAATTGATTGTTTTCAGTGGCGACAAA
AATTGGACTATAATTTTCCAATGGGGACGATATTTTGGCCAATTATTCCA
GTAAAAAGGATTCCTAGTAGGTCTGTGGGAAGGGGTTTTGTTTAGCGACC
TTGTATGGGAAAGGAAATGAGATAGTCTTTGTCAAGTAGAAAGTAAGAAC
TGACAATGTAAGGGTATTTATTGGTGAGTTGGCATTGAGCTTTCACTCAC
TGTCGTTGTTTTGGTGCTTGAAGAAGAAAGTGATGGTATTTCAGTTTCAA
ATGTGCTGTGTAGTTATGATGTACTGTGAATATCACAGCGTACTTTCGCT
GAGCCTGGTAAACGTGGGAAAGGTTGGAATTAAACGGTAGAGGGGGTTGT
TTTTGAAAATTCTTCAAACTTAAACGGGGGGGGGAGTTAATGGAAATTGG
AAATTTTATCTCTGGATACCCCACTCCCCCCCCCCCAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCAAATA
AGGTAATTTAGAATGAAATCTTGCAGCCAATAACACTAAGGACATTTGAG
GAATATATTAGGAGCTCAAATAATAATCATTGTCACAATATTGAATACCA
CGACACGGTAAACAAATGGTGGAAATATTTGATGCAAAGGCGTTCCCTTC
TGTTCACCATGTCATGTCATGCTTTTATGCTAGTATATTTTTTAGACTTT
CATAAAAAAATGATGAAGTTTAGAATGAAAATTTACAATGAAACTTTTCT
TTTTTTAAAACCAAAAGACCGCCGCAGCGTTCCATGTCTGCGAAAAGGTC
TTAAAGTTTTAAAATTAAAAGTCATCTAAAGTCTTTTTTATTCAAAAAAA
TAAGGTTTTCTGATTAATCAGGGGCTCATTTAGAATAAATATTTCCCTTT
TTACCCAAATTTTGTTTTACTATAGAAATTGAAGATATAAAAGAGCCCCG
AAAAAAATTAGTGGGCACAAAATTTTATTCAATGCAATAATTTTATTTCA
AGAATTTATTGGTCAAAATTTGAAATAGATTTTTTAACTTTATTACAGAC
CTCAAAATTCTATTAGTTGTAAAGAGGGCTTCCTCCCCTAGTGAAAGGGC
TCTTTATGGTCGGCCGAAATAAAATGAACGAAAGATTGATGTTATGTCTG
AAACATCTATTTAGATGTTAAAAGTGACAAAAGATAAAAGTAATCTCGAT
CAGTTTAGTTACTCTACGATCCTCATTTTTTATCATTAATTTCTTTTTCA
GGATAATTTGATTGTGCTGGGAAAATTGTAATAACAGAAAAAGTTGATTA
TTATCTACGATGATTTCAATCGAAATAGATATTACCAATCGAAGTAAACT
AATAAAATAAAGTGCTTTCCAGTGACCGTCAAAATTCTAAAAAAGAGTCA
GGTTTTTTACATTGTCACATTTTGGATTGGAATAGTAGCGTGGAACTTGT
TTCGCCATGAACAACACGAGCTTGGATCACCTACAAACTAACAAAATTGC
TCTTCATAAATTTACCGAGAGTGAGAAAGCCATATTTACAACTGGCTTAG
CAATATTAAGCTTATTGACTTTATTTGGAAACACCCTTGTCATTGTGGCG
TTTTATAAATACCGCCCGTTACGTACTCGAACGAATTACTTCATTGTTTC
ACTCTCGGTTTCTGATATATTGGTTGCTTTGATTAGCATGCCGGTATGGG
CGGTAGTGATTATAACGGACTATGATAGAGCGATTCTTATTGAAAGAAAG
GTAAGCCAATTTCAGGGTTTGTATTTTGTATCTTGAANTTCTTATTGAAA
GAAAGGTAAGAACCAATTTCAGGGTTTGTATTTTGTATCTTGAATAAAAA
TAACACCTTTGTACCCAAATGAAAAGCAAGGGTCTCATTTACATTACAGC
GAGCTCAGGCTCAAAATTACATTAATGTAAGCCCCCTATTATCAAACAAA
CCCTCTCGAATTATAAACAGTTCTGAATAAGCAAATTTCTCAAAATATCA
TAATACGGGAACGAGAACAACTCTTCTCTTCTTGGTATATATTTGCTATT
TTCACAGTGTTTTTTACGCCGTGTACTAGCTGGGAAATACCGTGAAAATC
AAGTAAAGGCATGATATCATCATCAGCTTGATTTTCTTATTTTCATTTTT
AGCTTTTGATGATCTGGACTTCAGTCGATATCATGACAGGAATCGCATCT
ATACTCAACCTAACAACAATCACCATTGATCGTTACATACACGTCACACG
GCCGCTTAAGCATCCAAAATTAGTCACACGGCGACGCGTGATTCTGGCCA
TCATATTAATATGGGCTTTCTCATTGTTTGTCTCTCTTAGTAAAGGGATA
TTTCATGAGTTTTGGCGTCATAATAAACCATCTTATGAAACGATGATTGT
CTCGGTTGGGTTTGTATTGCCTTTAATGGTCATCAGTTATTGTTATTTAC
GTATCTACCAAGTTGTAAGAGTACAAGTCAACAAATTCAAACACCAGACT
AAACACTTAGCACCTTCTTCTGCGAATTCTGATAAAGAAAAGACTGACGT
TAAAGCTATAAAGACAATCGCGGTTGTTATTTTGGCCTTTTTCTTTTGCT
GGTGTCCATTCTTTGTTTTGAATCTGTACAACGGTTGGTGCCGGTTTCAT
TTGGGTCCTCAAAGAAATGAATGCATTATAAACCGGCAACTTGTGACTGC
TGCAAAATGGTTGCACTATTGCAACAGTTCTCTGAATCCAGTCATCTACG
CATGCTTCAATCGTGAATTTCGACTCGGTTTCAAGACAGCTTTATACAGA
CATTTTGCTGGCCGAGATTCTAGCTCCAGTTTCTCCAGTATGTTAAAAAG
AGCATCCATCAAGTCGTATTTGTATGAAGTGAATGGCGTACCACATAACC
TTTTATCGGATGGGAAATCTAAAAAGTTTCAAATGCAAGCGTATGATGTT
ATAATTATGGATGATATTGAGCGTCGGAGCTCTTGTACTAAACTCCAACC
GTGGATGCAAGATTTATGAATATTTTTTACTTGTCCCCAACTAATAGGAT
GAATTTTCGTGGGGACTTAATTACGTGAATAATTAATAACTACCAAATCA
TGCATGATGTTTGTTGAAACGCCCATTATTAGCGTTTCTTTGATGCCACA
ACCATGGACAAAATACTTCAGACAAAGGGGATTGCTTTCCCGGGGAAATT
TTAAACACCATAAATAATTTTTAAATACCTTTATTGGAAAGAAGAGTTTT
ACCTCTGAATTTTAACATGAGACTTTAGGATAGGACCTTAGAATTTAAGG
ATTCAAAAGCTCAAATTTGCTCGAATAAGGCTTCTCAGGCATTTTAAGGT
TTGTCCAAATTTTCCGTAATTTTTAAACACCAATAGCACTCGCCAAGAGG
TGTTCATTCATACCTTTTTGGAAGCGTATTAGGGTGTAGAATATGAAAAG
TGCTTTTCGATAATTGTTTTGTTTGCCTAAATAAAGATATATGGATAAAT
AATGCAAAAAATGTAAAAACGCTGACGTCAGCAAAACTTATTTTTTAAAT
AACTTTTGATTGGCTTAATTTTAGATGCTGAAATTTTGCAGAATGCAAGA
GAATATTGAAAAGCACATTTTGGATCGCATTTGGGATATAGCCTAGAAAC
CATCGAACCCTTCTGAAA Coding sequence (CDS) from alignment at sc0000449:218317..223784- >TCONS_00023275 ID=TCONS_00023275|Name=TCONS_00023275|organism=Clytia hemisphaerica|type=CDS|length=2322bp|location=Sequence derived from alignment at sc0000449:218317..223784- (Clytia hemisphaerica)
CTTTTGATGATCTGGACTTCAGTCGATATCATGACAGGAATCGCATCTAT
ACTCAACCTAACAACAATCACCATTGATCGTTACATACACGTCACACGGC
CGCTTAAGCATCCAAAATTAGTCACACGGCGACGCGTGATTCTGGCCATC
ATATTAATATGGGCTTTCTCATTGTTTGTCTCTCTTAGTAAAGGGATATT
TCATGAGTTTTGGCGTCATAATAAACCATCTTATGAAACGATGATTGTCT
CGGTTGGGTTTGTATTGCCTTTAATGGTCATCAGTTATTGTTATTTACGT
ATCTACCAAGTTGTAAGAGTACAAGTCAACAAATTCAAACACCAGACTAA
ACACTTAGCACCTTCTTCTGCGAATTCTGATAAAGAAAAGACTGACGTTA
AAGCTATAAAGACAATCGCGGTTGTTATTTTGGCCTTTTTCTTTTGCTGG
TGTCCATTCTTTGTTTTGAATCTGTACAACGGTTGGTGCCGGTTTCATTT
GGGTCCTCAAAGAAATGAATGCATTATAAACCGGCAACTTGTGACTGCTG
CAAAATGGTTGCACTATTGCAACAGTTCTCTGAATCCAGTCATCTACGCA
TGCTTCAATCGTGAATTTCGACTCGGTTTCAAGACAGCTTTATACAGACA
TTTTGCTGGCCGAGATTCTAGCTCCAGTTTCTCCAGTATGTTAAAAAGAG
CATCCATCAAGTCGTATTTGTATGAAGTGAATGGCGTACCACATAACCTT
TTATCGGATGGGAAATCTAAAAAGTTTCAAATGCAAGCGTATGATGTTAT
AATTATGGATGATATTGAGCGTCGGAGCTCTTGTACTAAACTCCAACCGT
GGATGCAAGATTTATGAATGAACAACACGAGCTTGGATCACCTACAAACT
AACAAAATTGCTCTTCATAAATTTACCGAGAGTGAGAAAGCCATATTTAC
AACTGGCTTAGCAATATTAAGCTTATTGACTTTATTTGGAAACACCCTTG
TCATTGTGGCGTTTTATAAATACCGCCCGTTACGTACTCGAACGAATTAC
TTCATTGTTTCACTCTCGGTTTCTGATATATTGGTTGCTTTGATTAGCAT
GCCGGTATGGGCGGTAGTGATTATAACGGACTATGATAGAGCGATTCTTA
TTGAAAGAAAGCTTTTGATGATCTGGACTTCAGTCGATATCATGACAGGA
ATCGCATCTATACTCAACCTAACAACAATCACCATTGATCGTTACATACA
CGTCACACGGCCGCTTAAGCATCCAAAATTAGTCACACGGCGACGCGTGA
TTCTGGCCATCATATTAATATGGGCTTTCTCATTGTTTGTCTCTCTTAGT
AAAGGGATATTTCATGAGTTTTGGCGTCATAATAAACCATCTTATGAAAC
GATGATTGTCTCGGTTGGGTTTGTATTGCCTTTAATGGTCATCAGTTATT
GTTATTTACGTATCTACCAAGTTGTAAGAGTACAAGTCAACAAATTCAAA
CACCAGACTAAACACTTAGCACCTTCTTCTGCGAATTCTGATAAAGAAAA
GACTGACGTTAAAGCTATAAAGACAATCGCGGTTGTTATTTTGGCCTTTT
TCTTTTGCTGGTGTCCATTCTTTGTTTTGAATCTGTACAACGGTTGGTGC
CGGTTTCATTTGGGTCCTCAAAGAAATGAATGCATTATAAACCGGCAACT
TGTGACTGCTGCAAAATGGTTGCACTATTGCAACAGTTCTCTGAATCCAG
TCATCTACGCATGCTTCAATCGTGAATTTCGACTCGGTTTCAAGACAGCT
TTATACAGACATTTTGCTGGCCGAGATTCTAGCTCCAGTTTCTCCAGTAT
GTTAAAAAGAGCATCCATCAAGTCGTATTTGTATGAAGTGAATGGCGTAC
CACATAACCTTTTATCGGATGGGAAATCTAAAAAGTTTCAAATGCAAGCG
TATGATGTTATAATTATGGATGATATTGAGCGTCGGAGCTCTTGTACTAA
ACTCCAACCGTGGATGCAAGATTTATGAATGAACAACACGAGCTTGGATC
ACCTACAAACTAACAAAATTGCTCTTCATAAATTTACCGAGAGTGAGAAA
GCCATATTTACAACTGGCTTAGCAATATTAAGCTTATTGACTTTATTTGG
AAACACCCTTGTCATTGTGGCGTTTTATAAATACCGCCCGTTACGTACTC
GAACGAATTACTTCATTGTTTCACTCTCGGTTTCTGATATATTGGTTGCT
TTGATTAGCATGCCGGTATGGGCGGTAGTGATTATAACGGACTATGATAG
AGCGATTCTTATTGAAAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023275-exon-sc0000449-1575043694:223710..223784 | TCONS_00023275-exon-sc0000449-1575043694:223710..223784 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1575043694:220235..220733 | TCONS_00023275-exon-sc0000449-1575043694:220235..220733 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1575043694:218317..219832 | TCONS_00023275-exon-sc0000449-1575043694:218317..219832 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1510915933:223710..223784 | TCONS_00023275-exon-sc0000449-1510915933:223710..223784 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1510915933:220235..220733 | TCONS_00023275-exon-sc0000449-1510915933:220235..220733 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1510915933:218317..219832 | TCONS_00023275-exon-sc0000449-1510915933:218317..219832 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1491911889:223710..223784 | TCONS_00023275-exon-sc0000449-1491911889:223710..223784 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1491911889:220235..220733 | TCONS_00023275-exon-sc0000449-1491911889:220235..220733 | Clytia hemisphaerica | exon |
| TCONS_00023275-exon-sc0000449-1491911889:218317..219832 | TCONS_00023275-exon-sc0000449-1491911889:218317..219832 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000449 | supercontig | sc0000449:218317..223784 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
BLAST of TCONS_00023275 vs. Swiss-Prot (Human)
Match: HRH2 (Histamine H2 receptor OS=Homo sapiens GN=HRH2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.468e-38 Identity = 110/314 (35.03%), Postives = 159/314 (50.64%), Query Frame = 2
Query: 350 KAIFTTGLAILSLLTLFGNTLVIVAFYKYRPLRTRTNYFIVSLSVSDILVALISMPVWAVVIITDYDRAILIERKLLMIWTSVDIMTGIASILNLTTITIDRYIHVTRPLKHPKLVTRRRVILAIILIWAFSLFVSLSKGIFHEFWR-HNKPSYETMIVS----------------VGFVLPLMVISYCYLRIYQVVRVQVNKFKHQTKHLAPSSANSDKEKTDVKAIKTIAVVILAFFFCWCPFFVLNLYNGWCRFHLGPQRNECIINRQLVTAAKWLHYCNSSLNPVIYACFNREFRLGFKTALYRHFAGRD 1240
K T LA+L L+T+ GN +V +A R LR TN FIVSL+++D+L+ L+ +P A I + I+TS+D+M ASILNL I++DRY V PL++P LVT RV ++++LIW S ++LS H W N+ S S V F LPL+++ Y RI++V R Q + H++ A + +E KA T+A V+ AF CW P+F +Y G R + IN L WL Y NS+LNP++YA NR+FR G++ A R+
Sbjct: 18 KITITVVLAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSLAITDLLLGLLVLPFSA---IYQLSCKWSFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRVAISLVLIWVIS--ITLSFLSIHLGWNSRNETSKGNHTTSKCKVQVNEVYGLVDGLVTFYLPLLIMCITYYRIFKVARDQAKRI----NHISSWKAATIREH---KATVTLAAVMGAFIICWFPYFTAFVYRGL--------RGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANRN 311
The following BLAST results are available for this feature:
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