TCONS_00022269 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022269
Unique NameTCONS_00022269
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022269 ID=TCONS_00022269|Name=TCONS_00022269|organism=Clytia hemisphaerica|type=transcript|length=1391bp
atagataatgaaaagaagaatcacaaaaataatttatacgCTTTTCATAT
TGGTTGGATTGTGTCTATCTTGCTCAGAAGTGCTGGAGTTTGCACATAGA
CTATCTATTGATGTGACTTTTCCCGACCAGGCATTGGATAAACAAACTTG
CCTGTATACGATCGAAGAATTAGAAGAAAACTCGAATTACGAACTTCGTG
TATCTTATCCAGCAGTTATACCAACGGATTTTGTTCTTGAAGTTGAAGAA
AGTCAAGGAAGAATTTCAAATAGGAAACTTTTGAACGTTGAACAACTTCA
GTGGAAAGCAGGAAGCAAAAGTTATATCATCAAAGTAAGAGCACATCGAA
CGGGAGTTCCAATCAATCTGAAGCGTCTTCAAGACCCAGTTCCCTTCAAT
ATTATTGTCAACAGATTATATTTGGGCTGTTCTCTGGCCACCTGGAAACT
CATCACCTCTATTGTTTTCACTATTGTGTTGGTCTTGAAGTTCTCTTTAC
CTCGATTACTCAAGATGGTGGATGAAATGGATCACAAAGTCGAATAGttt
ttaaaaCAAGGAAAACAACTACACAACACGATGACTAAAATGAATTCGAT
TTTGCAACTGGTATGTTTAGTAACTTTCATCTCCTTTTGTCATTCCGCTT
CGTTGGTGCGACGCTCCGTTGATGGTTCTGCGTCGACGCCGTGCGCTGTG
AAGAAAATGCGGATGAAAATCTACGAGCCTGGCTGTGGTGTAGTAACGGT
AATCACTAAAGGTTGCCATGGTTATTGCACCTCCTCCTCAATGTATACTA
ACGATAAAGACGCGTTGGCTATCGATTGCAAATTCTGTAAACCAAAGAAA
ACGATTCGCAAAATGACCGTTATGAAATGCCCCATGTTGagcaagaaaac
gaaagtgattgcTTACCGTGAAGCAGTTTCGTGTCAATGTGACGGGTGTC
CTTCGTGAGCGTGAACGTGAACGTGTTTACGTAAGGTCTCGATGGATGGA
CCTTAAGCAACTTggaaaatcatttcaaaagaTTGTTATAAGATGGTGCT
AGACGTAATGAGCATCTTCGACAGAAACTGTTGAGCTGATATTCTTTTTA
GAGTGTATTGCTTGACCAATCAATCCCCAGTGGGTGAGGCTACGTTATCT
AGTTTGAGAACAATACAGAAATAGACATTAATTCATGAAAGAATCTTGAA
AGATATCACTTTCATCTAAAACGAtaaattcaaacttttcgaCAGAGACA
TTTTCTgcaattatttatttattggcATTTTGTTCGTttctgaaataaag
aaaattaagcGATTTTTCAAAACTGTTTTTCGTCTGTTGTTAGGTTATAT
ACCGTTTTACAAGGCTTTTTTTGAAATGAATTGGGTAGGGG
Run BLAST on NCBI

transcript from alignment at sc0000410:213684..229551+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022269 ID=TCONS_00022269|Name=TCONS_00022269|organism=Clytia hemisphaerica|type=transcript|length=15868bp|location=Sequence derived from alignment at sc0000410:213684..229551+ (Clytia hemisphaerica)
atagataatgaaaagaagaatcacaaaaataatttatacgCTTTTCATAT
TGGTTGGATTGTGTCTATCTTGCTCAGAAGTGCTGGAGTTTGCACATAGG
TAAAGAGATTTATTTTGCCTTTTACAACTTTTTCTAATCAGCGGTGTAAG
GTATTGCAGTCCTAGATGCgaaaatcttcttctttttgaaTTGCTACCAA
TCCTAACAATGAATAATTATTCTACTTTGTAATTTTAGACTATCTATTGA
TGTGACTTTTCCCGACCAGGTATGTGGTTTTCACATTTCTTGTAggaaac
agtcaaaaaaaatacaGTTCAAAGCAATATTCAACGGGTACACTATTTag
attcaaagaaaaaactGATAATTTGACCTTATGATGAAAGAGGGCAACGA
TGTAAGTGAAAAAATGATATAATGTTaccaattttcttattttctgaaAC
TCTTACTTTTTCAATCAAGGCATTGGATAAACAAACTTGCCTGTATACGA
TCGAANCTCGGGATTGTCAGATCCTACCAAATATATCCAGGCTTATGCGT
AAGAGCTGTTGAGCTTGGCTAGGGATGTGGCACATCAAAGGTGGACTTTC
ATTACTCTCCAATGAGATATTGACCTACTCCTTCAGACCTCCAGCATATT
GATAAAGTTACAACATTCAGATAAAGTTACTGATGTCATCATAATTATTG
TTGTTTGTCTTTCCtaagtattttctttttatagatAATGAAAAGAAGAA
TCACAAAATTAATTTATACACTTTTCATATTGGTTGGATTGTGTCTGTCT
TGCTCAGAAGTGCTGGAGTTTGCACATAGgtaaagaaatttattttgccT
TTTACAACTTCTTCTAATCAGCGGTGTAAGGTATTGCAGTCCCAGATgcg
aaaatctttttgaattgCTACCAATCCTAACAATGAATAATTATTCTACT
TTGTAATTTTAGACTATCTATTGATGTGACTTTTCCCGACCAGGTATGTG
GTTTTCACATTTCTTGTAGGAAACAGTCAAAAACAGTTACAGTTCATCAA
AGCAATATTCAACGGGTACACTATTTagattcaaagaaaaaactGATAAT
TTGACCTTATGATGAAAGAGGGCAACGATGTAAGTGAAATAATGATATAA
TGTTaccaattttcttattttctgaaACTCTTACTTTTTCAATCAAGGCA
TTGGATAAACAAACTTGCCTGTATACGATCGAAGAATTAGAAGAAAACTC
GAATTACGAACTTCGTGTATCTTATCCAGCAGTTGTAAGTCAttgctttt
gaaattttcatttccttGACGCAGTGTTTCTGCCCTAATAAGATGGATCA
ggggggggcaagcagttagtacacgaCACCCATGAcacttagtaccgtgg
tgggtccatttttcaaattttcaaaatgcagTTAGTACTCCAGTGTACTA
ACTGCCAAAAGGGGTGgtgtatattttcaaatttgcaaaaaacaGTTAGT
ACACCTGTGTACTAACTGCCGAAAGGGGTGGTGTATACagaattttggaa
gaaaaaaggtgtattaactgTTTTCAAAACGAGAATTTTAAACTAGATtt
ctcagatttttactgttatCAGTTTATGAGAGGTTTATGGTtctatcttt
tttatttatcttcttTCTAGGACAGTCAGGAATAAACAGCTTGACACATG
ACATTGCAATTCTAGGAAGTCTTAGAACTCTTAGAAATATTCGaaataaa
acattcgaatttgaaaatttcgaacttTCAAacgttttctgttttgtttt
ggtaATCGGATCATCCGATCCATAAtcgggaaaaatagaaaattatctAA
AGATGGTGGATAAGTTGCTGAACAAACATGCTGTGTTTTCTGTCTAAAAA
ATGTTTCTGGAAAGTCATTATTGTCACTTTAACTAGGTTAGAAACTGGTT
AAAActacttttttcctcagtttcATCGAGAGATATGGTtatacttttta
caaaaaaggaaaaactgggaaaatgactctttttgtgtgtttttgtCTCG
TTTTTCCTGATAGTGTACTGTATATCTGATTAGAGTGACCTGTATATAAT
CTGCTGTAATTTGTTTTCACatgattttaataattttttacatgatcggt
ttagaaataaaaaactaaGATACTGAAATGCAAATATGGGAGATAAATCA
TAAgaatacaaactgtgaaagcTTCAGAAAATGTCGTCACTGTGGTGAGA
TATATAATTTGAAATCTGTAGGACACAATATCCAGAATTGAGGCATGTGC
CACCcgtaaaagaaaaattcaatcaGCTTCCATAACataatttgttatat
ttttatttgtttgaaagTAGTTAGTGGTAAATACCTGGTAAAGACAGGTA
AAAACATAACCTCCCTGGGGTGTGAAATTCACCTGGAATGCACCGTAGAG
AGACGGATCCTTATTTTGGGGGGTGGTATATATATTGAGCAAGGTCAAAG
ACAGTTAGTACACAGTGTACTAAGTGACAGGGGTTGGTGGTGGGGtacag
atttttccaaaaatcagttagtacacataGTGttctgtactaactgcttg
ccccccccccctggatggATACAAATGAACACAAAAGTTTAAATGTGAAG
GTTTTCTCCGTGAATCTTTTCtgtcaaatatattttattctCGTTTGGAC
ATGGAACAGAATAATGAAACTTTCTTATTGCACAGTTTTTCTTttgcaag
aaactttttgaaataaaacagcATGGGGCTGTATGGGGCTGTATGGGGCT
CATTGTTGACGTAAAGCTAAGAGCCATACTAAAACACTCTCAgcctcaaa
tttcataaaatggcaaagaaaatgttgattAATTAAGCCCTGCATTAAGT
TAATGTATGAGTAAAATAAGCATAAAGTGAGTAATCCTGGTAATaacgaa
aaataagaaaagccaAGACTCGACCAAGAGTTACTGGTTTCTATTCTTGA
TATGTATAACTCAATTTTATAGCGTAAATaccagaaaacagaaaaaagcc
GGGGAAAAACCCCTctttgttactaaaaatagaaacaaggTACCTttagg
gaacttattttggcgggaactaattttggcgagcaacaaaaatttaaaaa
aagtttaattttggcgggaactaattttggcgaatagtgaatttttttaa
ttttggcgggaactaattttggcaaatgacagcgtaaatctgttttattt
tgccttattttgagcaattttgatgaatttcaggggttatttaggcaagg
aaacaaaaaattttattttggtgggaacttattttggcgagtgagcaaaa
tatttaattttagcgggaactaaATTCCCCAAAATTAGCtgccgccaaaa
taagttcccttaaggtagtcaaaatctgtcaaaatccgaccttttttggg
tgcttccgttaggAAATTTGACGTAATCAATTCTAAACAATTTTCTCTGT
AGATACCAACGGATTTTGTTCTTGAAGTTGAAGAAAGTCAAGGAAGAATT
TCAAATAGGAAACTTTTGAACGTTGAACAACTTCAGTGGAAAGCAGGAAG
CAAAGTGAGCTTTCATATAATTcctcatttttcaaattctataGTTCTAG
AATGTTAAAATATAGGGGAACTTTAAGTGATTTTTATAGGGTACATCCTT
TTTTGGCACTCTTATCATTACATTGTAATATTATGTGACTCTGGATACTT
TTTTGTTCTTCCCTTATTTGACAACAAAAGCGAGTTTATGGTAATAGGTT
TTGGTTTTAGGGCAAAAATAAATAAGTGCACCCGTACCCTAAAGACCACT
TAAGAGTTCCCTTTTAAGCTTAGTTCTTTCCTTCTATTTTGAGTCAGTCA
GAGTTTGATTTATCGTATTCATTGCTTTTAATCACAAAACGTCCATTCCT
TTCTCACAGAGTTATATCATCAAAGTAAGAGCACATCGAACGGGAGTTCC
AATCAATCTGAAGCGTCTTCAAGACCCAGTTCCCTTCAATATTAGTAAGG
TTATTTTAAGTCATTTTTCCTTTTTGCTGTATTTAGCTTTTGTATTACAT
TTCGCTGTCTGAAGCTCTCAGGGCGAGAGAAGCactcttttgaaaaagaa
atatcgGAATATTTTGACAACTTATGCATTCACGATCCGTTTACTGGGGA
CAGCCCCTTAAATAGTCGGAAGGCTTAGTTTTCAGTATTATTTATTTTGT
CGAACCTTTAATTTTATGTTTAGTTGTCAACAGATTATATTTGGGCTGTT
CTCTGGCCACCTGGAAACTCATCACCTCTATTGTTTTCACTATTGTGTTG
GTCTTGAAGTTCTCTTTACCTCGATTACTCAAGATGGTGGATGAAATGGA
TCACAAAGTCGAATAGGTATGTGTTTTGGTGATTGGTTTTATTTGATTTT
CGTCAAGTTTTCTAACACTGTTGAAAATTTCTATCTCATAAGGTTCTGCA
ACCTCGTCCctgtgtattccaggctttattaaTGTTACTTACGGACATCA
GAGAATAactacgcagggaacgaggttgaagGTTCTGTTCTCCGTCACAA
CGAAATATAGAAATAAACTACCCCGTCTCCAGATTAAGCAAAATTCGTTA
ATAATGTAATAATTAGAAAGATCAGAGCTacctgtaccagacgaccacgt
cgtgataaaaaaaattgcgtgcTGGGATAGGATCTACCTTTCCTTGTGTA
AATTTTAAATTCCGCTTGGCACGAATCTTTTTTATGAAGCTTTCTAGACA
GAGTTTTCCGCGTAAGTGATGTGATGGGATTAGCGTGTGGGAACCTTTTA
CAGCATGCACCCTTTAGAGAGGCGGAGCTCAATGCAAGGTAGTTTGCAAA
TGTTAACAATAGACAtacaatcaaatcaataaccCTTTATCATTCTATCC
CTAACGATTGTGTGATAAAAAAACCTGTACGAgtttgtttgcgtcatata
ggGATCATTTTAAGGAGAGTGCTGTGCTCAGCGGAAGTAAAATATGTAGC
TCTTGATCAATTGCAAGATTATCGTGGGATATTTCTTTCTAAGGCATTGG
ATATGCTGATAGAATTTCTAGACACCCCGGATATTGTGTTTGTGATTCTA
ATATACCATTTGTTTGTAAGGGAGTGGATTTTATATTTGTGTGTGGGTGT
GTTCTTGTATAAAAAGAGATCTCTTGCAGGGTTCAGGATGAATATAGTTA
AGCAGTAGTAAAGCTGGGGAAAGTGCTGGAAGGAAGGTCATTGCAGTGCT
CTGAAAATGGATTAgatattaaatttcaaattgaacGTTGACAATTAGAC
TTAGATTTTAGGTCAATTTTGAACTTATATATCAAGCAACAATGCGGAAC
AACATTGAAGTAAATTTTCAGtcgtttgttttttgttggaaCATTTTATG
GCTTCGGTGATTACACTCGCAGATGAGTTTGTTTGAGGTTTGAATTTTTG
ACCTTGCTAATACCAGATTATATATTCATACCCGTATGAAGATTTCTTTT
CAATCAGCTAAACAAATGTTAATCGATTTTCAAAGCGCAATTTTGTGGCC
ATCTGAGTTATTTcggttatttaaaaaatttatgttttgagCAATTACCC
CTCCTTTTTGTTGCATTAGTCGAATTGTttcctttttaaaaacaatttaa
cgactgtggtttttttctgaaatcatATAAATGAATGAAATTGTGTAATC
ACTTCTACTTGAGCGAGATCTCAAATTAATGTTTGGCGTTTTCAAACACT
GGCCGCTATATTTTTCATTCATCCCAAGTTCAACTTATGGTGACTATAAA
CCCAAAGACATTTTTAAGGCTCAAAGACTttattaagttatgatgatccC
ATTATCAGATTTTGGCATTAATGGTGTTTATTAATAACTTCTCAAGGCAT
TTTGAACGCACAATATAATTATAGAAAATCCATTTCTCCTTTTCTTTTGA
GGCGATTAATGGCGTATTTCTTTGATGCTATATATAGAGTGTCAGCCAAC
CGCATGTGTTTAATTAAACGTTGAATCTATTGACGGGTAATGAGTATTTC
ATAACTcattaaattttctgatttggCTTTGGTGGAATCAACACCTCGTG
CATTACATGATGATGATGTCTTTATTTTTTGCAGAACTTGGTCATATCTA
GCCTGGGAATTCAAGCGCTAAACTTTTTTCACGGTCTAGATTTTGATATT
GCTATGTTGGTTTACCGTTTATTGCAGATAGCTCGCTTGCAGGGAGATTT
TGATTCATCAAAGtttgtcaacaagggttcacacacagacggTATCAAAG
ATTCTGTATCAGACTGATTTAGCTGCACCAAGCTAAgaaattttagaact
ttgtgatctgatatattttttgttttttctgaaattttgaacttGGATTC
CCTGGCTAGACCTTATGAATCTTTTTGTCTTCATGCTGGTACGTCAATTC
TGGTGCAGATGCTAATATAAAAGCTGATTTATTTAGGTGATGTCCTTTTT
GTTCTGATGTTTTTAACAGCTTACGCAACCTTTTGCGGTGTTGATGGCTA
TATTTGTAGTACCTGAAATTTATCTAATTCATATCTAAAGCATAAAAATT
TGGATGCTTTGATCTTCAAATTAATTGGGAAAATactgaaaacttaaaat
ttcgCAATTCAAATAATTCGATATTGTTCAGAAAACGGTATCAGTATCTA
TTCAGTGCTAGGCGTAAATTGGTTGCATTTGTTATAATTTGTTTTAATAT
AGAATTCTTTCAAATGTATCAAGTCAGCTTTTTGCTACGTAATATTTTGT
AATGAAATTTTTCGACGGGCGTCGGATGTTTATTTTGTTTAGTTCCTATG
GATAATCTTCAGGCAATGCCTCTTGACTTAAACCCCTCATTCTTCACATA
GCTTTAATTGTCCATACACTGCTGGCGTTGAGTTTGTTTTTGTCTCGGAT
TAGTCTTAATATTGTCTCACAGCTTCTTGTTTATTAATGAGAATTTTTCT
AATGATTGTCTAGTTCTTGGAGATTGGATATTTTTATTGATATAGGCGCG
CCTCTCATGCAGACACAGCAAAATTTATGCAGGTGCATAGTTTAAAAATG
CTGGGTAAGCAAATGGTCTGACATTCGTTATAtttactgacctttatata
tccctggaccaagctacatccgccatctttgatcgaagttgcagtgctaa
aaattaacgtctaacggcgctacatcatcaaaagttttcgagggatggta
gatctagcgctctcgatgcatttaggGTACCAcatgccgccattagggta
ccacatccgatcaaagatgaccgggattgagaaactcgGTCCatggtata
taaaggtcagtggtttaTGTCAAATTTTTAATGATCTGTTTATTCCCAAT
CCCTACTCAAAGCTTTTTACATGCGTCTATGCTTCTGAAGAATGTCAATC
GAGATTTTCCTGGGAATCGTGGAAAGCTCTTATTTAGAGTGAAAAACTAA
AAGAGTTGAGTGTGAAATCTTGAATTTTACGAGAAATTTTAATTAGTTTG
AGCCGGGCTTTCAACAGTATGCTTGTCCGAAATTTGTGGTATATAAAATG
CTGAACGATACGGGGGAGTGTTTCTCGTTTCCATTTATATGTGTTATCCA
GTGTGCTTACTTGATCACTCCTTCGCTGTGTTCCATTCCCATGTGACGTA
GTTTTGTGGTAGGATTAATGCAAAGTGCTTTAAAACTCACAAGAAGATTT
AGCGAGAGATTAAATCATTTTTCATCAACAACTTTACTTTTGTTTATTTG
GCTGCAACATGAATCTTTTGACACATCCTGTTGGATATGTTCCAAGAAGG
TTGCCAGGAGGAGTATTGATGGTCTGTGCTCTAGAACATTCTTTGTCTGG
TACAGTGTACAAAGCTCTTCCTTCTCGGACGGATTTTCTTCTCAGTGAGG
TACAAAAGCAGTGGTGGTCTGTGCAGAAATTTTAAGGTACCTCTTGATTT
CTGTcgaaattttagaaaacttcCCTGtatttgtcaagaattttcatTGA
CCCCCTCTCCCTCTTGGATTATCTGGTATTTTAGGGTACCTCCGGAAAAA
ATGACCACCTGAAAACTGTTTCTGTTTATGTACTATTGTCTATAATATCA
CACGTTTTCTCTTATGATGTACAATCATAGGGGGCGGTTTGATGGTTTGA
CGCTATTACTTTTTTTTCTgtcggtgttttggtgtttgaaaacaaaaagt
acgcggtatttcggtgtctcgGTGTCATGTGGTGACAAAATATGTATTTT
TGCGATTTTCGGTGACTGTGCTGATAAGAAAAATGCGTCACGCTGTTCTC
TTACACCGCTTTTCATTAGTCAGCACAAGATTTGATCTTTTGCTTCCTTC
TCTAATCGGATCCTTTAAAtctcattttgaagaataaagCCTTGCAGACA
CAGAAAATGAATTTAGAATTTAGAAGTATGCAAATATAGCTTCGTCTTCc
agaaggaattttttctttcatgaaATGATACTAAAAGAATAAATTTATGT
CAATGTACTTTATCGCTTTTTCTAAGATGTTAAGGCTcaatatattttta
attctGTCCTGTAGCACGTGCGCTTCCTTCAATCACCTTCAATATTTCCT
TCTCGGTTTTTGATCTTGTTAATTTGATTAATTCTTCAACGCGCTGAATA
ATCGGTGAACTAATCTTACGGAAGTGATATTCATACATTCTCGTTAGAAT
CTTCTGTGTGGTATAAAATGGTGTCTCTATTCTAATCTTTCGACAGTTGA
TGTGGGACGTCTGTTGTCTGTTAACAAAACCTCTTACACCGAAACAGTTT
TCTCCGTATGttaatttttgttcattttggcCTGAAAAACTGACCAAGAT
GATAGTTTTGAAATCTAGAAACTTCTACTGGACGATACTTGTTAATTTGA
ATGGCATCCATCGAATGTTTCTTTTAGTATGAAGgattttgtttgtgttt
ttttttcgtaaTAAGAACactaattttttgaaacttcaGGCTGAACTTTT
CAGATCTTAAAGCTTTAAAAGCTTATATTAagattttcccattttcagCA
ATTTGTGTGAATCTTACttcaattttctaagaaattgatggtttttgaga
acatagtcttaaaatgttcttataattttaTGCCTTGAAGCCGTATGTTC
TTACCCagcaggcacacaacgttgtttcaacgtttatctaacgttcacaa
cgtccatataacgttagattaacgtttaaacaacgtcgtgtgcccgCTGG
GTATATATTTTGCTcttattgaaagaaaaaggtATATGCGTTACGCATGA
GTACGAATACCCTGTcagtttttttgtaaatattgtaaatattttcctCC
AACTTTGAATTAGTcaaactattttcttttttcttcctttGCTGTTCTTT
AGATGAATGTTCTTTTAACATTTCACAGTTGTACAACTTTTCTTAAGATG
TGTTAGGAATTGGAAAGCTAAGGTAATTTGACCGTTGATAATTTCGGATC
TGGTCTTTAATGAAACTAATGAGTTTGTCAGTGGCTAAAGTTAAAAATGG
AAatccttgtttttattttgcacTTGCAAAGCATGCCCGTTAAAAGTAtg
cgatattcaattttttcttatcaGTAGAAGTAACCAGTAATAAGCAGCTA
TATTAACTGTCATATCTGGAGCATACCGTAGATTATTGACCAACGTTAAA
AAGTATTTGTCCCAGGTTCTGGAGCtctttttttcatgaatcttgACTCC
TGGTTGGGTGAGTGAAATTTCTTTACTTGAACAACCCTTCAGACGTTTTG
GCAAGATAAATGGTTTGTTTAGCTGTGGGAAATTCGTCCAGCTATGCTTT
TGCAATCTGATTGATCTTCTTATCGTGGGTTTATTGAAGCACATATGATC
GCTCTATTTATTGGCTGTCATTAAAGTGTTAATTCTTTCGGTTCAATACC
CTACAAAATCCATTCTCCCACACGAGCCGTTTCCAAGACGACGGGTTTAC
TTCCGTTCAAAAGGTATCTTAACTTCCTTTTAACACTCGACTTTACGTAT
TTCTGCAGGATGTTTGTTGAGTGAGAGGTTTCTATGGAGCAAGATCAATT
TGGTACTTTCCCTTTCGTCCAACGCACTGTCTGTAGGATGAGGTTTGAGG
ATAGGGTCTATCAACAAGTTCTTAAGATTAAGGTACGATAACGAAGGCTT
GCTCAGGTGCTCAAAAAGGATCGTTTAATCTCCTTATATGGAATTCCCGA
ATGGTACAACTTCATTTAAAAGGTATTATTTTAACGCTCCGACCAATCAG
CATAAGGTACTATTGTTTGTTGACAATAGAGCTTCATCTttataaaaaac
tatttaaTTTTTATAGTGCAGTGGGGCTTTTTTAGTATAAAAAGCTCTCA
ATCCAGCCTCCCAGTCGCAGTTGCTTGCTCAAAGAATAGAGGACCGTGAA
TCTACTTTCGCCTTATCCTTCAAAGGGGTTGTTTACAATGAAAACAACAT
TGGTGGTGATACTCGTATATAAATGGTTCGGGTGTTTCTTTACTTTTGTC
TATCACTTCTATTTATGGTATGATGAGTATAGTAAGGAGTAAGCAAAAAC
TGTTGGAATTAATTAGTTTAAAATCTTTGAACATTTTGCTAACTTACTTG
GTTCtccaattatctttttatttggtCTGCTCAGTTGCAGTTAGATTCGA
ACGCAACTTATTATCTGGAAAAACATTGTAAGACCTATTAGACGAATCTT
ATGAGATTTTGCTTTcggtcaaaaatcgaaaatactaTTAGGTTTGTTGA
AGACCGTTGTGATAGAGTAGGCTGCACGCATTGCCTCCGATATGTATTGG
TATAGGGGttgcgtatcgtgtatgaaatttcCTTCCAAGAGTTTCCTGAA
ATTTAAAGTAACCTGCTTCAACTTATATCGTTTTCATTGCCTCTGCACAA
ATTTGATAACACTGATATGACTCTCCTTCGTTTTACGAGTATAGCGTAAC
GTTCATTTAGTCTGTTCGGTAAAATATACCCCCTTAAAAAGACGAAGACG
GAGGtaactcttggatgggaaatttAAACACGATACGCAGCTCCAAGTAT
CAAAATTAATTTCGGGGATGAGTGCAGCCTGGTAATAGAGCAGAACAGAC
GGTTTTTGGTAATGCTACTGACTAAGAACTGTGAAGGTGGAACGACTGAG
AAATCCTCTAAATCTTTCTAGCTTTGTCATATTTTACAAACTCAAGCTTC
TATTTGCAAGTATTTATCTATCGAAAATTGCGTCATGCGTCGAGAGGAAA
AATCCTCGTTTTAGACTTCTTGGTTTTTGTCTCTGCGGttcaaaaataga
aattcaTTCAGCTCGCTTCTATATTAAGAATGTATtactttttgatcaat
tttcaCGGTATTTTTTAAAACCGACCAAAGTTCTTTTCATTGGGTGATAA
GTCTTTATGTATTAACGAACATCAAATTGTTATGACCATGTTTTGACCTT
ATTTGGAGGACCTTAATCTCTGATATCTATAGccacaacatttttcaaag
atgaTTCGGATGCCCGTTTTGAGCTCAAAAAAATTGTTActtcttttgat
gtttttaaggcGTTTCTTTACCCTCCCTCTGGTCAGTGAAACTTGATATA
AACCCCCTTTGAacctcctgtttctttatacaaAGTAGCAAAGTCTACTT
CTGGAGCCTATGGTACATTGGAGAGTtgatgtatttgcacttttggggAC
GGCAAAtaggccactatgtcttcccgtgtgcagcagcttgtgcaaaggga
ttttatgattgaatattgttccttgaatgtagaagatcaaaatttgagag
gtggggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCacattacaggcaaaattta
aaaatatcaattttggctcatagacttcttaaaaaggattttcagacttt
ttcataataatattttttgttcactggaaggtacttattccaaaaaacca
aaagtttttgaattttggcaaattcttatttttcgatgacgtcatcgttt
tatgacgtcattttgccttatttccttaatatctcctgatatattcattt
tcagatataggttgtgacctttttcttTATCAGTTTTTCATGCTCTTTCG
ACTGAAACAAAAttttttcaattttgatgactttttattttggttgccat
agtaaccaatgacgtcagtttccatggcaacgggtggtcacacccggctc
cacctctcaaattttgatcttctacattcaaggaacaatattcaatcata
aaatccctttgcacaagctgctgcacacgggaagctttttcgcgacatag
tggGNNTTTTGTCCcgcaaaattgaggacggtaaagctgcttgtttaccg
tcgtcctcagttgatcaggatctagtcaaatcagaagctaaccgtctccA
TCGCTGGAAAACACATGAGCTCGCCCAGACTAACTAACTTTTCCAGTCTC
AGTTTGAGGGTGATTTACTTGCTTCTTTTTCGTCCTTATGCAATGTGGAG
AGGGTGTTCTTTTATACTTCATGAAAAGGAAATAATCTATCCCCAATTAA
GTTCAACGATGTTAGATTGCATTTCTTGTGTTTCCTgtgctttttatttt
tagatgagTATTTTTGAGCAGTCGTCCTTAAAACAACACACGGCGTCTTT
GATCGACCTCAGCAGTTGACTATTACGAAAGTGTCTTTTTTTTCGGGTTA
GATGTTCAGACAGATTGGTAGAAGATTGCATTCTCGTGAACTCTTCCATT
GAAGTTTGGTGATGTAATCGTGCATTGATTCGATATAAAAAACGATATAT
TAAAAATCCAACCAATCAATGATTTCGAAGTTTAAAATGTCAAAGAATAG
TACAGTCAAGTCCATAACTTGAACACGCGcgggaacacaaatttgatcga
gttatggagtaacgTTTATTAACTGAAGAGACgatgttcgagttaaagag
actccactgtcattgatttagatttttgaaaCCGGCTGCCACTTTTCCAA
CTTCTTTGAAGTTCTGCTATTTCCTGTGTCTTGGTGGTCTAGGCCCAAAC
TTCCAAATTGTTGATGTGGCGGTCAAGTTTGTAAGAATTTGTGACGTTTA
TTTGAGAGAGGGGAGATCTATTTTTAAAACTGCTGTGACCTTTAACACCT
CGTTTTACGGCGCGTGAAAATGTCAACTATTTCATACACACGCCTGAAGA
GGCTTTTCAAACCTCCCCTATTTcacattctttttttaatctaCTTACGA
ATGCTATGATCTCTTGTAATTGTCTCAGCAGATGGGTTTATGTCAGTGTT
GCGTTGTTGTGTAAGGCGTTTGGTCGCAGAGTATTTTACTTATTGACTTT
CGCCTCACCAATGCCTAACTAGTGTTCAACTTTCAGGGAAATTACATTGT
ACGAATCTAATTGAAATATTGCAGGGCCTGTGTCTCCGAAACATAGTCTG
ACCAAAATGTCGTAAGCTTGGATTTTTATtcgtattttaacttttttgtt
ttgttttttgatgtAGTGTTCCATTTTGTAATTTCGAACTTCGTCAGATA
TTTATTTAGCCAAGAAGACAAAGTAAGTAAGATCAAAATTGactttcgaa
actctctatttaGCTTGAAGTCTGAAGTACTTAGATAATTTTTGGAACAT
AGATCCCCTTGCCTTTATTTTCTTTTGCGATGACTTTGCGCAAAAACAAG
GTAATCGCATGCCTCGCATTTTCTAGTTCAAATTCACGTTGTCTAAAGTA
TCGAAAATCTTTTTGGTTTGGATGATGATTCGAAAGTTGTGTGAATGAAG
TTATATGTCGCGACAGCATTAATCGGTCCGCTATCACAATGGTTTGTAAA
TAAGGTGCAACCATGCAAGTTGTAAGATGTTGAGTTTTTGTCAGATTATA
ACTGTTTTCGTCACTGTCCCTTCATCTTTTTTTGGAAGTTTCACACTTAA
GCTTCACTGATTCACTCAGCAAGATTATAGCAGTGTTTGAGCGAGTGGTT
GAGTGTGTATAAATACTATGATTGATTCGTGATCGTGAGAACTTGTCGGA
TAATGCACCTCTGCTTTAGTATTTTTAAGTTTgtcatttcattttttaat
caCCGTACAACTGACTTTGAACTAAACAGAGTGCCCAAGGGGTATCATAT
TTAGAAAATAAACCAAATGAGGAATGCATGAGAAAGCAAAAAACTTTTAA
GTATTGGTATTTTAAGTATCATTTTCTAATACGTTCATTCCTTTcctttt
cagtttttaaaaCAAGGAAAACAACTACACAACACGATGACTAAAATGAA
TTCGATTTTGCAACTGGTATGTTTAGTAACTTTCATCTCCTTTTGTCATT
CCGCTTCGTTGGTGCGACGCTCCGTTGATGGTTCTGCGTCGACGCCGTGC
GCTGTGAAGAAAATGCGGATGAAAATCTACGAGCCTGGCTGTGGTGTAGT
AACGGTAATCACTAAAGGTTGCCATGGTTATTGCACCTCCTCCTCAATGT
ATACTAACGATAAAGACGCGTTGGCTATCGATTGCAAATTCTGTAAACCA
AAGAAAACGATTCGCAAAATGACCGTTATGAAATGCCCCATGTTGagcaa
gaaaacgaaagtgattgcTTACCGTGAAGCAGTTTCGTGTCAATGTGACG
GGTGTCCTTCGTGAGCGTGAACGTGAACGTGTTTACGTAAGGTCTCGATG
GACCTTAAGCAACCTggaaaatcatttcaaaagaTTGTTATAAGNAAACG
TGTTTACGTAAGGTCTCGATGGATGGACCTTAAGCAACTTggaaaatcat
ttcaaaagaTTGTTATAAGATGGTGCTAGACGTAATGAGCATCTTCGACA
GAAACTGTTGAGCTGATATTCTTTTTAGAGTGTATTGCTTGACCAATCAA
TCCCCAGTGGGTGAGGCTACGTTATCTAGTTTGAGAACAATACAGAAATA
GACATTAATTCATGAAAGAATCTTGAAAGATATCACTTTCATCTAAAACG
AtaaattcaaacttttcgaCAGAGACATTTTCTgcaattatttatttatt
ggcATTTTGTTCGTttctgaaataaagaaaattaagcGATTTTTCAAAAC
TGTTTTTCGTCTGTTGTTAGGTTATATACCGTTTTACAAGGCTTTTTTTG
AAATGAATTGGGTAGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012487XLOC_012487Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022269-exon-sc0000410-1491911889:213684..213782TCONS_00022269-exon-sc0000410-1491911889:213684..213782Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:213684..213782TCONS_00022269-exon-sc0000410-1510915933:213684..213782Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:213684..213782TCONS_00022269-exon-sc0000410-1575043694:213684..213782Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:214646..214676TCONS_00022269-exon-sc0000410-1491911889:214646..214676Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:214646..214676TCONS_00022269-exon-sc0000410-1510915933:214646..214676Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:214646..214676TCONS_00022269-exon-sc0000410-1575043694:214646..214676Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:214881..214967TCONS_00022269-exon-sc0000410-1491911889:214881..214967Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:214881..214967TCONS_00022269-exon-sc0000410-1510915933:214881..214967Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:214881..214967TCONS_00022269-exon-sc0000410-1575043694:214881..214967Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:217186..217287TCONS_00022269-exon-sc0000410-1491911889:217186..217287Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:217186..217287TCONS_00022269-exon-sc0000410-1510915933:217186..217287Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:217186..217287TCONS_00022269-exon-sc0000410-1575043694:217186..217287Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:217643..217727TCONS_00022269-exon-sc0000410-1491911889:217643..217727Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:217643..217727TCONS_00022269-exon-sc0000410-1510915933:217643..217727Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:217643..217727TCONS_00022269-exon-sc0000410-1575043694:217643..217727Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:217957..218099TCONS_00022269-exon-sc0000410-1491911889:217957..218099Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:217957..218099TCONS_00022269-exon-sc0000410-1510915933:217957..218099Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:217957..218099TCONS_00022269-exon-sc0000410-1575043694:217957..218099Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:228637..229074TCONS_00022269-exon-sc0000410-1491911889:228637..229074Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:228637..229074TCONS_00022269-exon-sc0000410-1510915933:228637..229074Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:228637..229074TCONS_00022269-exon-sc0000410-1575043694:228637..229074Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1491911889:229146..229551TCONS_00022269-exon-sc0000410-1491911889:229146..229551Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1510915933:229146..229551TCONS_00022269-exon-sc0000410-1510915933:229146..229551Clytia hemisphaericaexon
TCONS_00022269-exon-sc0000410-1575043694:229146..229551TCONS_00022269-exon-sc0000410-1575043694:229146..229551Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000410supercontigsc0000410:213684..229551 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.80763	7.51219	4.171	0.000989046	2.28163	7.38587e-07	2.01197	2.43196	0.947034	4.14096e-07	0.584472	0.755106	3.28704e-06	2.59296	0.135672	2.71335	4.09746	4.61578	1.26893	1.20557	1.98414	2.72768	8.14895	2.65022	2.38343	5.91996	0.910773	1.24406	4.00508	4.11988
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022269 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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