TCONS_00022223 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022223
Unique NameTCONS_00022223
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3855

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022223 ID=TCONS_00022223|Name=TCONS_00022223|organism=Clytia hemisphaerica|type=transcript|length=3855bp
aaaatttttttttcataacgaAATTTTTATTAACGAAGATTTGATGTCAT
AGAAGAATCATATTAATATTTAAGAGAGGACGACACAAGACGAACACGAG
ACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCATC
TAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAAATGA
ATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGCAA
GACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAAAG
ACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATATTTTGCCCGT
CAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCCTGTGAAGTTA
ACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAATTCAACTTTGT
TGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAAGTTGAGCAAG
AAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAATGAAAGACAAG
AAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGCATTTGGATGA
GGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGATCGTGCTcgaa
tgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCTTACACCTCCA
AAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTGCAAT
TTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCTGCTG
CTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCTGTTAAGTTTT
CCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTTCCAGCCAT
CCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTAAAGTGAGAAGGA
TGTATCATCCCTACAAACAGGCTACAAGCTAACTTCTACCATCCTAACTC
TCTTAAAATTCACTGTTACTTTCTAATCGATTTAATTCTTGGGGAATGGA
TCGACTAATTGATTAATCGAATACTGTGTTCACACACACTACCATACATT
GACAGTTTACATTCACGGATTTCATGGATTTACCTCATGACCACGACAAA
AATAATACCCCACAAACACGTGTCTATGAGATGACACTATGTGTTTTAAT
TTTcgttttaaaaaacaattttaacagAATCTTTATAACTATACATATAA
TTCGTATTTTTACACAATGCAacctttatttttatatttttagaagtCTA
GAAACCGAAACTTTTTAAGTCAAGTTTAAAGTTTCTAGTCCCTCTACATA
AATATTTGACTAGAATTTTATATTAGATTAGTTCAGTTTAGTTTGAATAC
GTAGTCTGTTTAACCCTGGTTCGCTTCtctttcttgaaaaaatgtaaCGG
CTTTTCTTCTTGAGGGCGTGAtaggaagaaagaaaaaatggtATTAAAAA
CCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAGATTTTTTcggaa
agaaataaaaacattggaatattttttgatcttaTCAATCTGTTacatca
atattttttaacttcaataaaaaaacttaactTTGTTGTATCTAGATAAG
ATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGAAAGGACGTACTG
ATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAATAAATGTTTTTA
ACAATTAATTCATAGCCGCTAAAGACTAACtttcttgaagaaaaaaaaaa
attatgtaacaTCACATGATACATCCAGGTAATTCTAGATTCCAGAGACC
CCTTTCAAGGAGGAAACCTTCGAATTCTGGtgtgtttttttaaatattct
tccATCTTCTTTTAAACCAGGCTCTTGTAGAAAACATGTGTATGATTCGA
TCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACTTTGTAGTTTTAA
ATGCGCATAACGTACTGGAATACACCCTTATTTCACTCATTTGGAAAAca
aaactaaagtctattcacgataagtgtgcactcttttttcttttacctat
aacttttgaaggaattcttcaatctttataaatttggtatcattggaaaN
AACCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAGATTTTTTcgg
aaagaaataaaaacattggaatattttttgatcttaTCAATCTGTTacat
caatattttttaacttcaaaaaaaaacttaactGCGTTGTATCTAGATAA
GATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGAAAGGACGTACT
GATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAATAAATGTTTTT
AACAATTAATTCATAGCCGCTAAAGACTAACtttcttgaagaaaaaaaaa
aatatgcaaCATCACATGATACATCCAGGTAATTCTAGATTCCAGAGACC
CCTTTCAAGGAGGAAACCTTCGAATTCTGgtgtttgttttttaatattCT
TCCATCTTCTTTTAAACGAGGCTCTTATAGAAAACATGTGTATGATTCGA
TCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACTTTGTAGTTCTAA
ATGCGCATAACGTACTGGAATACACCCTTATTTCActcattttgaaaaca
aaactaatgCTAATCTTTCTATGACCCAATTCGGTCactaatttttcaaa
gaattaaCCTTTGTAGTCTTTTGTCAGTGCATTTAGTGATTATTAGTTTA
AATTTGTGTTGGTAGCTTAATTTCTTTTCggtttaatgatttttttaaag
aaactatAGATGATTTATTATACTTTTTAATTACCTAAATTaccaaattt
tttataaaattatcataTATATTATACgtgtaaatcaaaaaatttattat
CAAATTATTATAGTATATGGTGCTTccggaaaatttaaatattaggatta
ttttttttcggacacgcTGCGCAATGTGTCTGTAGAAAATACAGAAATAG
AATTGATATTAAATATCGTTCATGTAATTCAAGCGATGGCTCTTATATCG
ATgaaactaccttaagggaactaattttggcgggaactaattttggcgga
tttggtgaatttagacgaaattctccaaaattagttcctgccaaaattaa
attttttgtttccttgcctaaataacccctgaaattcatcaaaattgctc
aaaataaggcaaaatagaacagatttacgctgccattcgccaaaattagt
tcccgccaaaattaaaaattttaggatatttgctgcctgccaaaattagt
tcaggccaaaaaagttcccttaaggtatattcCGTTTTTCGCAGACGCAC
TTTATATCAGAGAGCTAAGAGAGTGTCAAAAATTATTATTACTATTGTAC
AAAGGATAAGATTTTCAACACTTGTTGGTTTATAAATTAtatggaattta
attttgcaaaaaaaatagatttttatgGTATAGATTTTATTaggaaaata
ttaaatttttacttcataGAGAAAGAAGAACCTATATGGTATTCATTAAA
TTATTTACTGTCCCAATTTTTCTTCATTGTTTATCCATCTTTggacaaga
tcttttttcggaCAGTACCTGATAACTGTTGTGGTCAGTGTTGTAGGAAA
CGAATTAAAATGTTTTCCTAACAGCTGTTATACAtttgtaatagaccttt
tcataaattacgtcatgaacatcacttgcctcgtattcaaacaatttcca
tggtgatcatatcccttgagacattaaatgatttttttaagaataggaag
tagtt
Run BLAST on NCBI

transcript from alignment at sc0000408:180107..189119+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022223 ID=TCONS_00022223|Name=TCONS_00022223|organism=Clytia hemisphaerica|type=transcript|length=9013bp|location=Sequence derived from alignment at sc0000408:180107..189119+ (Clytia hemisphaerica)
aaaatttttttttcataacgaAATTTTTATTAACGAAGATTTGATGTCAT
AGAAGAATCATATTAATATTTAAGAGAGGcaagaaagaaatatttttgta
tgcGCTGACCCCCGTCTCAAATCAGTGTTCTTCTACTAACAAATCAAGCT
GGCGAGAATTTCTGATCACTCACAAAATACCTTGCCTCTTGACAGGACGA
CACAAGACGAACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCA
ACAACACAGAATTCATCTAACCAACTCATAACAAATTCAACTACCACAAC
AGCAGCAAGAAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACT
TGAATCAGCTATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATC
TTTTTGCATTCTGAAAGACTTCTAGATGAAGGTGAGTTAGCTGTGATTAC
TCTTTTGATTCTAgtaaaaccttttgaaaaatgtCCCTGACAAAATGCCC
ATTGTCTAAGAAAGCTGATTAAAATCAATCTCTTTTTCGACAGACAACTT
CCTTAAGGTTATTTAATTAATTTTGTAGTAAGAGGTTTACCATAATGACG
TAGAAATTACATCTCTCTGCATACTGCAAGCATGTTTTTGTCAGCAGCTT
GATTAAAAATGTCTGTTTTGACTTTTGATTTATATTagatatcaatgttt
tgattcaatttttcaatattcaTAACATTGTTTGTagtttttgtaataaa
aatttgaatatttcttaGAAGAGCTACATGTTATATCCTGATTTTGTTCG
ATTTGGGTTATTTCCTTTTACTATCACTTATTATTGATACACaccttttt
tatagaaattagTCGTGTACGAAATGACATATTTTGCCCGTCAAGCTTCT
TGATGTCACTGCCAAAACCCTCTGGACCTCCTGTGAAGTTAACTGAAAAA
GTTTATGCAAAAGTCAAAGATCACCCTAAAGTAAGTAAATATTGTAGTGT
TTCATTGTGCCAGTTCTAATATTGATCAGGCCCCATTTCAAATACCCCTG
TTGAAGTGGGTTGAAATTAACATATGAAATTTCTTTCCGGCCATTATGGA
ACACGTGGTGAAGGAGTGAGTGCTCTTGAGAAAATGTAAGTCACCATTGA
CGGCCTAAATAAAGTGATGTGAGTAAAATTGAGCTTTTCAAATGCTAGAA
ATAGTTGTTGCCCAACTCTGTTGTTTCAGATATTGTCTGAAAATACTTTT
CCCATGTAAATTGCTAAAAATTTCCCCGGAAAAGTCGATTGTGCGCTGTA
GAGGGATTAATCATCAAAATTCTATTCACACTGATAGTGATAACATAGCC
TTTCATAATATAGCCTTTCATAATTCAGATTACTTCTGCAAGAACTGTTA
GCGGTAAAATAATGATCAGTCCGAATTCTTAAAAGGCAGGGTTGCGTCCC
CTAAGCTTTATCCAGGCTAATTTTTTGGATATGAATGTAACATTTCTTTA
TTCtataaatttcatgttttattttaAGTTCAACTTTGTTGGTCGTATTA
TTGGTCCACGTGGTCTCACCTTACGTCAAGTTGAGCAAGAAACAGGAGGG
AAGCTTCTTGTTAGAGGAAGAGGTTCAATGAAAGACAAGAAAGTGGAGGA
AGAAAAACGTGGACAACCAAACTATGAGCATTTGGATGAGGATCTTCATG
TTTTGATAATGGTTGAAGATACTGAAGATCGTGCTcgaatgaaattgaaa
aaagctgTTGAAGAAGTTAACTTCCTCCTTACACCTCCAgtaagaaaatt
atgtttttgaatttGGAATCATTATATACCAAACAAATCTCAAGTGCTCT
AAAATTCTTTGCATATAAGTTGATATGCATTCAGCAACTTTGTTTATGTG
TTTTACAGGCAGTACAGGGTATTTGAGTAAGGGAGCTCAATTTTGTTTTC
CTCATAATTTCAGAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTC
AGGATCTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCA
AGCCCTCCTGCTGCTGCCACAGTCACTCAAAATGGTGGTAAGCAatgttt
tcaattattttgaagttaatatgataattatgaaaaatcaaACCCCAAGC
AGATCAGGCTATTTTTGTTTCCTCTTCTGACCTGGtaagatgttttgttt
ttaccCAGAACTCCTTTTTATCCGGGTGGAACATTTTGAATAAGAGGATA
agtttttactttaaaattttgaaaatttttctttcagtatCTCCAACTGG
GCTGTTAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACAT
CATTTCCAGCCATCCGAAACTCAGCAGGTGAGCCTGTTCATTACGACAAc
atgattttccgattttgtgATTTCGGTATAAATCCAACAGTGCCTACACA
ACAACATCCATCTTCGCGATCGTTCGGTTGTTGCTCTCCAACTGTGTTTT
AAGGAATCTTTTTGTGCAATGTGTTACATCAGGGTGgactttttgagttt
ggttttcaaatttgaaatttaattatGTGTGGTGTATTAAACCTAAACTT
CAAAGTTTGCTACTAATCACTAGaacttttttaacattttggtaATTTGA
ATGGTGCATTATAAATGTCAATAAGAATTTATGAAGGGATAACTAATAAT
TTATTGCAATAACCAAAATTAACTCTAAATTATAAAATCAGCATAACATT
TTTGAGTTCTTAACAAAACTAAAGACATTAGTTGTATATAGTTGGACTGG
ACCTTATCAACTTTTGTGGAACCTCCAATAAAACTAAAAAGCTACTGACC
ATAATGTTAAACAACTTTACCAAATAAAACTATTTGTCTGAATCTAATTT
GATTTCAGCAGCTGCACTGCAAGGCTTATATCCTCTTGAAACTTTCGCTC
AAAGAGGCACACCGGGTGCTTCGTTTCTGGATTTTACCAATCTGGATGGC
AGCTCGCTAATTTTGAGTAAAAGATGATAATTCATTCCAAACCGGCTGTA
ACAACTACtgtccaaaaatttaaaaactgttttgttgtgatttggtttat
gtttttttattgcGATATtcgcaaaataaatttcaaattaaatttttgta
aatccAATTTTATTGTATGATAATTTTATACGTTTGAAGTTTAGTTCAAG
ATTAATCTTGATACTAATTTTAACTTATATTTAATATAAATAACACATAA
ACGCTATTTTTACTAACTATTTACTTTTTTACcatttaataataataaaa
tactcAAATTGTGTCTTTTTTAACGACGTTTAAAATGATAAATTGGAAAA
CTTGTATTTACTATTTATTCtgcaatttttatattttttaaactaacttt
cattattttgttattttttgaaagCAATCTTGAGGAAACTGCATACATTT
TAGGGCAAGAAGGGTTCAACACTTACagtacattacattacattctTTAT
GCAAGTTTCAGAAATCCcttgccttaaaaaatcttgaatttttccTGTGG
ATagtattatttttaaaaaacagaTTTCTCTGAATAATGTAGTAGAACTt
actattttcatttcaataatattttatttgacGCTCAAAAGTAAAGAATT
TTATAGAAATATGAAGAAGTTtatgaatttgataaaaaacaaaaattcta
aCAACTCATGCTAAGAAAGGTCATGACATTTCAACATGGAACCGACCATG
AAATGCTActaataacaacaacaacagaaatGTATTGACCCAGAATAAAC
CCTGCTAACATCACGACTACTTATGTCATCCAACCAATCAACTGAAGAGA
GAATTATTACAGAAAACTGagcaattttattattttatatgaAGATACTT
TTaggtatttatttatttagcatAGATTATGTgaagagaaataaagaaaa
aatgaattttaaaatatttttggggtatttgattttctaaatgtTTTGGA
AATTAGGAGAGCTTTTGCAGATAAAAATTACAATCACTGACTTCGTGTca
gtcaaatttattttttttgataatttttcaattcccatgggaatattaaa
aataattactgttaaaaatcaaatttggaaATCAGATTTACGTTCTAATT
GTTCTGGAATGTTTTTTTGTGATATCGATGCCTGATGTACATAACATTGC
ACATTAAGACAACCCTACCCCCGTGATCTTCATTCCTCCCTTTTTCCTTG
ATTATTATTTGAAATGAAAGCCAAGTGTATATTTTATTGCCTCAAACTTC
AAAAGGAAAACTAGCTTTGAAACATCTGTCTCATCCCACTCCTGAATGGC
GAAATAGAGAGACTTGACAGCTATTATAGGACAAGGagcttaaaagattt
tctttttacttggcTTTTTTTCTTGACCACTTTCGTGTTTTTCTTCCATT
TGCTCTTTTTTTTATCACAAGCGATATTCTTTCTTGTATGTGTCAAAAAG
TAACAGATAATGTTAAGGGAGAAAAACGAAATAGAAAAATAGCTCATGAA
ACAGAAGAATAGAGACACCTTTTATCGCCTTTCTTTTGTCCAATGTATCG
AATCGACTTTCTGTTCTTTTCttcatcaaaatatattttgatactTGATA
ATTACCGCGTCGTTAAATATTGATGCTATTTCTTCAAGGAGAGGATAGGT
gaataacaaaaaggaaaattctagCTATAaaactttgttcttttttttca
ctgaTTGAGAAATGAGACAGATGGAGGTACAGCAGTATCGTCCTTTCTTT
TGTAAGAGTGGAATGAAATAAATGATATAAGACTTCAATTTCTCATTGAA
ATGAAATAAGGAAAAtgctttttctttctctttgttCATTATTGGGCACC
TTTCCGTCATTAAAGAGTCATGATGAAATGGCACCTTGAAGTGAGTGAAA
GTGAGACCACACCCTTGAACTCTTATCTCCTTTCTTTTATCCTATTGTAT
TCATAATACCTGACACATGCACTTATTCTAAACTATTCTCAATTAGTGCA
TTAGACAAAGATTAGCTTCTGAAAGTATTTTTTCTACCTGTGACAATTCT
CTCTTTTTACTTATCTTAGTTGATAAGGGTGTGTCTTCAATTTGTCGGTT
CTCtatgttattattattgtaACATGTCTCTGTTGTTATGTTATaactta
gtttttttttcacttgaatttagtttgtatttttttaaacgtTTCTAATT
TACGTCATCAATCTTATACAgtgtgtccaaaaaaaaaaaaacggaaaaGA
ATTCATATAAAGAAAAGTCATCATATTTTATGCCGACCATTACTTGAAGC
CAAATTAATGACTTTGGGAATTTGATAACTATTTGCTTTAAAAACATTAA
TTGTTCCCTGGCTAGTGAGatccgttttttttttcaaacacacTTACTTA
CTCCGTTAATGTTATTGTACAGGTCAACTAAAAGCACACATTGCTAAAGT
GAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAACTTCTACCAT
CCTAACTCTCTTAAAATTCACTGTTACTTTCTAATCGGTGCGTAATCATT
TATTTTCGTTTTATGTTTGTTACTGTATAATACACCGGTATCTAAGAAAG
ACATAGTTGAATATACCGACCCAATCTTTCTTAGACACCACCATGAAGTC
TCTTTATCTCCAGACATGAATGAAAGCGACAAATTTTCTTTCCCCAAAAA
AGACTCCTTATCTGTTCAAAAAACTTTAGGCACCTTGCCTGATACATCGA
GATAAAGAGGCTTTACAAATCTTACCCATGCCCCCAAAATAACCCTCTAT
ATTTCTAATTGAACAGTTTTTTAATTGATTGACACTGTTTCCCTTTAAAC
TGTGAATACTGACATGGATCCCTGATGAGTTTTAGTGTGGGGTCAATAAC
TCTTTAGTTATGTTTATAAGTTCACATAATGTTTATCTTCGCTCTAAGTC
ATGTTTTCTCTCCAAAGAATCCTGACTTTCCTGCTGATGACAAAGTGATA
GCTttcatgttttaattttcatccGTTCCCCCCTAAGCCCCATTAATTTC
CTCTCCACTCTATGATTTACTTTATTTGCTTACAAACTaatcattttttg
ttgtttttaatattttccttttccattATAATAACAGATTTAATTCTTGG
GGAATGGATCGACTAATTGATTAATCGAATACTGTGTTCACACACACTAC
CATACATTGACAGTTTACATTCACGGATTTCATGGATTTACCTCATGACC
ACGACAAAAATAATACCCCACAAACACGTGTCTATGAGATGACACTATGT
GTTTTAATTTTcgttttaaaaaacaattttaacagAATCTTTATAACTAT
ACATATAATTCGTATTTTTACACAATGCAacctttatttttatattttta
gaagtCTAGAAACCGAAACTTTTTAAGTCAAGTTTAAAGTTTCTAGTCCC
TCTACATAAATATTTGACTAGAATTTTATATTAGATTAGTTCAGTTTAGT
TTGAATACGTAGTCTGTTTAACCCTGGTTCGCTTCtctttcttgaaaaaa
tgtaaCGGCTTTTCTTCTTGAGGGCGTGAtaggaagaaagaaaaaatggt
ATTAAAAACCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAGATTT
TTTcggaaagaaataaaaacattggaatattttttgatcttaTCAATCTG
TTacatcaatattttttaacttcaataaaaaaacttaactTTGTTGTATC
TAGATAAGATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGAAAGG
ACGTACTGATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAATAAA
TGTTTTTAACAATTAATTCATAGCCGCTAAAGACTAACtttcttgaagaa
aaaaaaaaattatgtaacaTCACATGATACATCCAGGTAATTCTAGATTC
CAGAGACCCCTTTCAAGGAGGAAACCTTCGAATTCTGGtgtgttttttta
aatattcttccATCTTCTTTTAAACCAGGCTCTTGTAGAAAACATGTGTA
TGATTCGATCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACTTTGT
AGTTTTAAATGCGCATAACGTACTGGAATACACCCTTATTTCACTCATTT
GGAAAAcaaaactaaagtctattcacgataagtgtgcactcttttttctt
ttacctataacttttgaaggaattcttcaatctttataaatttggtatca
ttggaaaNAACCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAGAT
TTTTTcggaaagaaataaaaacattggaatattttttgatcttaTCAATC
TGTTacatcaatattttttaacttcaaaaaaaaacttaactGCGTTGTAT
CTAGATAAGATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGAAAG
GACGTACTGATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAATAA
ATGTTTTTAACAATTAATTCATAGCCGCTAAAGACTAACtttcttgaaga
aaaaaaaaaatatgcaaCATCACATGATACATCCAGGTAATTCTAGATTC
CAGAGACCCCTTTCAAGGAGGAAACCTTCGAATTCTGgtgtttgtttttt
aatattCTTCCATCTTCTTTTAAACGAGGCTCTTATAGAAAACATGTGTA
TGATTCGATCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACTTTGT
AGTTCTAAATGCGCATAACGTACTGGAATACACCCTTATTTCActcattt
tgaaaacaaaactaatgCTAATCTTTCTATGACCCAATTCGGTCactaat
ttttcaaagaattaaCCTTTGTAGTCTTTTGTCAGTGCATTTAGTGATTA
TTAGTTTAAATTTGTGTTGGTAGCTTAATTTCTTTTCggtttaatgattt
ttttaaagaaactatAGATGATTTATTATACTTTTTAATTACCTAAATTa
ccaaattttttataaaattatcataTATATTATACgtgtaaatcaaaaaa
tttattatCAAATTATTATAGTATATGGTGCTTccggaaaatttaaatat
taggattattttttttcggacacgcTGCGCAATGTGTCTGTAGAAAATAC
AGAAATAGAATTGATATTAAATATCGTTCATGTAATTCAAGCGATGGCTC
TTATATCGATgaaactaccttaagggaactaattttggcgggaactaatt
ttggcggatttggtgaatttagacgaaattctccaaaattagttcctgcc
aaaattaaattttttgtttccttgcctaaataacccctgaaattcatcaa
aattgctcaaaataaggcaaaatagaacagatttacgctgccattcgcca
aaattagttcccgccaaaattaaaaattttaggatatttgctgcctgcca
aaattagttcaggccaaaaaagttcccttaaggtatattcCGTTTTTCGC
AGACGCACTTTATATCAGAGAGCTAAGAGAGTGTCAAAAATTATTATTAC
TATTGTACAAAGGATAAGATTTTCAACACTTGTTGGTTTATAAATTAtat
ggaatttaattttgcaaaaaaaatagatttttatgGTATAGATTTTATTa
ggaaaatattaaatttttacttcataGAGAAAGAAGAACCTATATGGTAT
TCATTAAATTATTTACTGTCCCAATTTTTCTTCATTGTTTATCCATCTTT
ggacaagatcttttttcggaCAGTACCTGATAACTGTTGTGGTCAGTGTT
GTAGGAAACGAATTAAAATGTTTTCCTAACAGCTGTTATACAtttgtaat
agaccttttcataaattacgtcatgaacatcacttgcctcgtattcaaac
aatttccatggtgatcatatcccttgagacattaaatgatttttttaaga
ataggaagtagtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012455XLOC_012455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022223-exon-sc0000408-1491911889:180107..180184TCONS_00022223-exon-sc0000408-1491911889:180107..180184Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:180107..180184TCONS_00022223-exon-sc0000408-1510915933:180107..180184Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:180107..180184TCONS_00022223-exon-sc0000408-1575043694:180107..180184Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:180302..180537TCONS_00022223-exon-sc0000408-1491911889:180302..180537Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:180302..180537TCONS_00022223-exon-sc0000408-1510915933:180302..180537Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:180302..180537TCONS_00022223-exon-sc0000408-1575043694:180302..180537Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:180962..181086TCONS_00022223-exon-sc0000408-1491911889:180962..181086Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:180962..181086TCONS_00022223-exon-sc0000408-1510915933:180962..181086Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:180962..181086TCONS_00022223-exon-sc0000408-1575043694:180962..181086Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:181635..181895TCONS_00022223-exon-sc0000408-1491911889:181635..181895Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:181635..181895TCONS_00022223-exon-sc0000408-1510915933:181635..181895Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:181635..181895TCONS_00022223-exon-sc0000408-1575043694:181635..181895Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:182070..182193TCONS_00022223-exon-sc0000408-1491911889:182070..182193Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:182070..182193TCONS_00022223-exon-sc0000408-1510915933:182070..182193Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:182070..182193TCONS_00022223-exon-sc0000408-1575043694:182070..182193Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:182394..182483TCONS_00022223-exon-sc0000408-1491911889:182394..182483Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:182394..182483TCONS_00022223-exon-sc0000408-1510915933:182394..182483Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:182394..182483TCONS_00022223-exon-sc0000408-1575043694:182394..182483Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:185579..185693TCONS_00022223-exon-sc0000408-1491911889:185579..185693Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:185579..185693TCONS_00022223-exon-sc0000408-1510915933:185579..185693Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:185579..185693TCONS_00022223-exon-sc0000408-1575043694:185579..185693Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1491911889:186294..189119TCONS_00022223-exon-sc0000408-1491911889:186294..189119Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1510915933:186294..189119TCONS_00022223-exon-sc0000408-1510915933:186294..189119Clytia hemisphaericaexon
TCONS_00022223-exon-sc0000408-1575043694:186294..189119TCONS_00022223-exon-sc0000408-1575043694:186294..189119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:180107..189119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.209095	0.0771247	0.106068	0.00392216	1.81651e-08	1.4243e-09	0.00254324	7.64647e-06	0.00253378	0.00179305	0.135545	1.05922	3.24776	3.08311	4.75097	5.46735	3.16254	0.314966	5.07765	3.31605	0.419686	0.659616	4.77309	4.65572	8.69182e-06	1.25106e-08	2.53277	2.21811	6.04431	4.64866
Blast
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BLAST of TCONS_00022223 vs. Swiss-Prot (Human)
Match: QKI (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.895e-64
Identity = 113/193 (58.55%), Postives = 142/193 (73.58%), Query Frame = 2 
Query:  227 EYLNQLLQDKTTVSKMPK---IFLHSERLLDEEISRVRNDIF------CPSSFLMSLPKPSGPPVKLTEKVYAKVKDHPKFNFVGRIIGPRGLTLRQVEQETGGKLLVRGRGSMKDKKVEEEKRGQPNYEHLDEDLHVLIMVEDTEDRARMKLKKAVEEVNFLLTPPKDGEDAIKKKQLQDLAILNGTYRHPN 778
            +YL QL+ DK  +S +P    IF H ERLLDEEISRVR D++              LP   GP V+L EK+Y  VK++P FNFVGRI+GPRGLT +Q+E ETG K++VRG+GSM+DKK EE+ RG+PN+EHL+EDLHVLI VED ++RA +KLK+AVEEV  LL P  +GED++KK QL +LAILNGTYR  N
Sbjct:   16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDAN 208
The following BLAST results are available for this feature:
BLAST of TCONS_00022223 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QKI2.895e-6458.55Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
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