TCONS_00022018 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022018
Unique NameTCONS_00022018
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022018 ID=TCONS_00022018|Name=TCONS_00022018|organism=Clytia hemisphaerica|type=transcript|length=106bp
NNTTTTATCGAAGAAAACATGCTATCAATCAGAGTTCCATCTGGAGCTTC
GACTGAAGCACTGTCCCACCatcaagaaaataaataataacaaaCACCAG
AGATGG
Run BLAST on NCBI

transcript from alignment at sc0000401:222524..222629

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022018 ID=TCONS_00022018|Name=TCONS_00022018|organism=Clytia hemisphaerica|type=transcript|length=106bp|location=Sequence derived from alignment at sc0000401:222524..222629 (Clytia hemisphaerica)
CCATCTCTGGTGtttgttattatttattttcttgatGGTGGGACAGTGCT
TCAGTCGAAGCTCCAGATGGAACTCTGATTGATAGCATGTTTTCTTCGAT
AAAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012365XLOC_012365Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022018-exon-sc0000401-1491911889:222524..222629TCONS_00022018-exon-sc0000401-1491911889:222524..222629Clytia hemisphaericaexon
TCONS_00022018-exon-sc0000401-1510915933:222524..222629TCONS_00022018-exon-sc0000401-1510915933:222524..222629Clytia hemisphaericaexon
TCONS_00022018-exon-sc0000401-1575043694:222524..222629TCONS_00022018-exon-sc0000401-1575043694:222524..222629Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:222524..222629 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022018 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top