TCONS_00020734 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020734
Unique NameTCONS_00020734
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2297

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020734 ID=TCONS_00020734|Name=TCONS_00020734|organism=Clytia hemisphaerica|type=transcript|length=2297bp
AAGAAACTCAGTCTTAGGAAAgtaaacaataataaaaaaatcaaaatggc
gtcCTGATCCGGCTGTCAAAAAAGGtcatttctttttatattttatgtat
tttgtcacgtattttgtattgaaaattttgacatttgaatAGAGAAATGA
CAAGCTGTTAGATGCACGATGGCTCTGAATTTAAGTATTTCGCTTTGTCC
TTGACCTCCATTTTTGGTTATactgacaaaagaaaagaaacaatcATAAC
CAGATAATATCATCATGGCAGCAGAACTTCTAtggattttcaacattttc
atcaCCACGATTTCAATTACCATAGCCCATAAAGGGACAGTGAATTTCCT
GGTACACTcatttaaaaatgattcaaaGACCAATCAAGTATATGATACAG
CAATAATGAATATGGAACAATCAAATTCCAACATTGAGTTCCAGTTTCGT
AGAGCTGATGACTCATTTTTCTCTTGGacagttttttttgaaaaggatat
tcaaattttcaatagcATCAATCTTGGGGAAAGTGAATTAAACGAACAAA
GCCACAGATTTATTTGCTTTTTAGCTTATTATGATGGAAATCAGATAAGC
CaattaaaattgattgaaaGACTTTCTGAATCGGTTCCATTCGAGTACGT
TTTCAAGGAAATCAAAGCCCTAGAAACCAAAATATGGATAATGGACCAAG
TAATACATCCACATGAAATAGATAAATCTATCGCTCAAAAATGTCAAGGC
TCTGATCTCATACTATCAAACAAAGAACAAATCCGTCAAATTGCAGACTT
CTCAAATTTGTTCAATGGAAAAGATCAGACGTTCCGTTTCCAATCATTGC
CAATCAACCAATATCCGTTTTGTCTGTCATCGTCAGCCAGTGATTTGCAA
ATCAGATGTAAATGTCAGGCTATCCTAAACATAGGTTGGTATCCTTGTGG
TGAGAGATCGTGTGATAATGGCGAAGATAAACTCACATGCAACATGTTTT
ATTGCCAACGGACACATAAGTTTATTTATCTGGTAGATAAGTGGCAAGAT
TGTTTGAATACTACCCTATGATAAAGCTATCTTGGTTGATAATCTCATTA
TTGTCCACAATACTTTTCTCTGATAATGTTTTCACTCCTTGCTAATAAAA
TGTGATTCGATTTGAATTTCTTGGTCATGAAATAGTGCTTTTGAAAGACA
CTATGAAGTGAATTAAGTTAAAAAGGCTCGATAGTTAAATCCGCAAAAAA
ATGCTGAAAGCTGGGATTTGTTAAAGTTTATTATTACGCAAAAGAAATTT
CCTTTCAGTGACATACAACCTTCTGATACATTTTCTGCATGCTGGTGGAT
AAGTAGTTATgttaaagaaatctttttttacctccttttcacaaaaaaat
tgtgaaaatctaggatgaaaacaaaataaaagtagCAAAATTTCGACATT
TTGTTCCAGCGGAGTTTTCGAAAGCTTGATTCGTGGCAGCTCCATACCCT
TTGATGTCACGTTAAAGTGAAATACCTTGCAGCCAACTTGGCTAGGTCTT
ATCGTCCTTTTTCAGTTTACTTCACATGTGTGCCAGCGTTTAAGTGACCc
aataaaagactttaagataATAATTAAGCGAATGTCAGAAATAGTTAAAC
AAAATTCTATTATTATAGTCAAGGGGGGATTAGGAGTGTCTGCCTCTAGC
TAAATGTGCTTACAGACCAAGAGTAGAcatgcttttataagaacatacca
TCATAAGAATAGAGGGTTTCGATGACcaatatgttaagaacaaattcaga
acattttaaggctttactgACTCTATAAGACtcgattttcaagaaaatgg
accaaagtactcacaaaatagtgaaaataataacatgctaaaactcaaaa
agttaagatccAAATATTCCAAacaatttttggatgttcttattaaaaaa
aacctgtaaAGTCTTAAAAACATGGAGCTGGCTACTGTGCAGACTATGAA
ATACCACAATCTTCTCAGACTTTGTACATAAACAATTTGATATTGACATA
TATACCATTtttagcatatttattttttgatgttataagtttagttttag
tttatttataTACCATGTTATTTTATTATGTTAGAGTATTTATCCACCGA
TTATTTTGTATTCTTACATTTATATTGCTTTTTATAtatgcaagcaaaat
attttatattttactgtagcaaagaaatcattgaaaatttttgatcttCA
AATTGTATCAGCCTCAGGCCTGTTATTTTCCTGTCGcgcgtttttat
Run BLAST on NCBI

protein sequence of TCONS_00020734-protein

>TCONS_00020734-protein ID=TCONS_00020734-protein|Name=TCONS_00020734-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MAAELLWIFNIFITTISITIAHKGTVNFLVHSFKNDSKTNQVYDTAIMNM
EQSNSNIEFQFRRADDSFFSWTVFFEKDIQIFNSINLGESELNEQSHRFI
CFLAYYDGNQISQLKLIERLSESVPFEYVFKEIKALETKIWIMDQVIHPH
EIDKSIAQKCQGSDLILSNKEQIRQIADFSNLFNGKDQTFRFQSLPINQY
PFCLSSSASDLQIRCKCQAILNIGWYPCGERSCDNGEDKLTCNMFYCQRT
HKFIYLVDKWQDCLNTTL
Run BLAST on NCBI

transcript from alignment at sc0000365:163870..171149-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020734 ID=TCONS_00020734|Name=TCONS_00020734|organism=Clytia hemisphaerica|type=transcript|length=7280bp|location=Sequence derived from alignment at sc0000365:163870..171149- (Clytia hemisphaerica)
AAGAAACTCAGTCTTAGGAAAGTAAACAATAATAAAAAAATCAAAATGGC GTCCTGATCCGGCTGTCAAAAAAGGTCATTTCTTTTTATATTTTATGTAT TTTGTCACGTATTTTGTATTGAAAATTTTGACATTTGAATAGAGAAATGA CAAGCTGTTAGATGCACGATGGCTCTGAATTTAAGTATTTCGCTTTGTCC TTGACCTCCATTTTTGGTTATACTGACAAAAGAAAAGAAACAATCATAAC CAGATAATATCATCATGGCAGCAGAACTTCTATGGATTTTCAACATTTTC ATCACCACGATTTCAATTACCATAGCCCATAAAGGGACAGTGAATTTCCT GGTACACTCATTTAAAAATGATTCAAAGACCAATCAAGTATATGATACAG CAATAATGAATATGGAACAATCAAATTCCAACATTGAGTTCCAGTTTCGT AGAGCTGATGACTCATTTTTCTCTTGGACAGTTTTTTTTGAAAAGGTATA ATATCCTTATCTATAAAAATTAGATCATGTTTCAATGAAAAATGTGTAGG TAATATTTTTTAATTAGGCAAATGGCAGTCAGGGATCCTTGCAACCAGTC ATTTGTTTGAATAACTAATTCTTCTATTTCTATTTGGTTGAGTTGCAGGA GGCTTTAGAGGCCTATTCTCGCAACTATAGACGCTTACTAATGAGCGTCC CGTCAGCACCTTGAACTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCTGCACAGAAGCCAAG GTCGACTACCACTATACTACGGCACCTCCTTTAAATTACTCCAGCAGAAT CTTTTTTAAATATAACATCATACAGTATAATTAATTTGTCTTTTACAGCA GATCTGTTATCTAAGTATATACAAGGTAGTTTATTCTGTTTTTAATGGCT GGAGTAATCTGCTAAATAGACTGTCGTGTTCTCCCAAACAACTATTCATT ATATGGTAGCGACTCCAGAAGTCACGCAACTGTCGTTGACGTCAAACCAA ATGTTTCATATTTCCGTGAACTTTGAACCCTTCTAATTGTTTTAGTATGT ATGCTAAAGCGTTCCGGTTTTTACTAAAAGAAGGCCCGTGATCTTAGCTT TCCAGCGGTATATAACACTGTGGACTCGGGCTAGACGGCAAATTGGTAAA TGTTTACCCTAAGGGGCCATTCAAAAAGTACTTTCGTCCAAATTTCCCTA TTTTCAGACCCCCCCCCCCCCTTGTTTGTCAGCATTTGTTTGAAGTCCCC CCCCCCCCTTTGTACGTTCGTTTTTATCTCAAAATTTTTACCCCCCCCCC ACTTTTTCCTTTTAAGATAATTGAAGAATTTAGACAAGGCAAGTTCAAAG AATATGATTTTAGCGTTATTCTTTAATCTTATCGCACCTTAACTTTTTGC TCTCTAATTGTCTAATAATTGCTAAACAATTATAACATACACAATTGTTT AGGGGATTAACAATTATCTTTGGTTATGGATTCAAAGAAAAAATGTAATT AGGAGATAGATAGCAAAAGATTTTTCATAGACTAAGTTAAAAGTCACGCT TGTGACAAGCACCCCTCTCCCGCAAAAGCAAACGTACACAGATCGACTTG ACACCCCTCCCCCCCCCGTTCGTTTTCGTTTGCTTTTTTGCTGACCCCCT CTCCCCCCGTTCGTTTTCGTTCGCTTTTTTGCTGACCCCCTCCCCCCCCT CGGCGACGAACGTACTTTTAGAATGGCCCCTAACTCGAGATATGCCTTTT TGAAGTAGGAGCCAAAGTTGAGGTTAACATGGCCTGAGGTTGACACTGTT AAGGTTCTTTGACACCTTGTCATTTGACTTTTGAATTAGATTTTGAATAT GTTATAGCCCTGAAATTATCTCAAAGGGTTGAAAATTGCTCTGAAGGGTG TTATTTGAGGTTGACATTTATTAAAGGGCTCCAAAAATGAGGTTGACATT AGTTTAGTGCATAATTTTGATAAAGGTAGATCAATATGATGACTTTGGCT TACAAAATATCATTATTGACCATCTAAGAATCTTTTTCCAAGGAAATATC TGTTATTTGAGCAAGTTTTGAGGTTGACAATGCAACGTTTATTTCAATGC AAGGTAAAGTGCCTTATGACGGAAACAGCCAGAAGCTCTTTTAAAATAAT TTGTAAACCTCAATTATATTTGTTTTTAAGACAGAAAGACTATGGAATTG GATTCAAATGGTTATTGAAGCGTTTTTTTTAGGTTGACACCCCAAAAAGC CTTTTCTGCCCAATTTTGACTCAATACAGTCTTTTCCGGCTTGTCAACCT CAAAAACAGCTCATTTGATGGGTTTTGTTTGAAAATCTATCTTTGCTTAG CATTTTTGCCTTACTTAGAACATATTGTAATGTTCTAAGTCCAAATGTTG AGGTTTACATTGCATTTTAATAACACCGATTTTGTCAACCTCAAATTAGG TAATATAACAGGAAATCTTGGCTCTTTTAACACTTTTTGTCTTGTATAAC TATCCAGGGGTCTATTCTCACCAATTTTTACATTTCCTTTTTAGTTCCCT TTTCTGAGGATGACATTTCCTTGAAATGGTCATTTTTGGCCTGTCAATCT CAAACTGGCTCGAATTTAAGGGAAATACCTATATCTATGACTTTGTCTTC ATTAGCTCTATCACCTCCTGAAATCTTATTTCAGGATACCAAGTTTTGAG AAAGATATTGACAAAATTCTAAATTTGGTGTTTTTTTTCAAGAATTAAAA ATGTCACACTATTTTTGACCAGCTTCCCAAACGTTTTTGCAACATTTTTG AATTGTCTTCCGACGGGAGAAAAAGAATTTGCAACTATCGATGAACAAAT GTTTCTGGAAATGTAGGAAATTGTTGTTGAAGGCTGAAACTTTGTATGTT TATCAGAAAAAGGGTGAGGAATTCAAAAATCACATTCGCTAATTTTAGTT CTTTCATTTTCATGTAGTTTTTTTTCACTTTTTGCTTCTTTAGCATGGGA ATGCGCCAAAAAAAGTTTATATTTTCTTTTCATTTAGGGTTTCTCCTTTC AGAAAAACTTATTCTTTACTTATAACTTTTTGTTCCTCCATTTCCAGAGG CCCCTTGAAAATGGATCATATATACCACCTTTTTTTACTCATTTCAACCT TTTCCAAGCTACTTTTCTTCAAAAACAAAATAAAACAATGCAATGTCTTC TTTTTGCAAAAAAAGATATATCTTTCGTTATTTTCATAAATATACTAAAT ATTTTACAAATATTTTTATATAATAATATTCTAACACCATCAAAGAATTT TCCCTCCAAATTTCAGGTCTCTAGCTACACTAGAAAAAGAGGTATGCAAA ATTAAAGAAGCATGACTGGGAAATATTTTTTTTTTCTTTTTTGACACATT TTTCGAATTTTTCCAAGCCATTTTCCTAACCTTTTTTTGGACATTTTTAG TCAAATCTTTGACACTAAAATTTGAATATCTTTACAACCACTTAATCCTC TGGAGGCCTATTACCCCTCATTTTCTTTCTTTTTCAAAGAAGGTTGTTAG TGGCTGCACAGTTGCCAATATACAATGAGTAGAAAAAAAAGTTACCTTTT TACCCTGTGTTGTTCTATTGGGTAAATAGATAAGATTTTACTTGCAGAAA ATTAGCTTGATAAAATTTTCCTTGAGTCATTTTTTTCATTACAGAGTTGA GTATCATTTCACAAAATAAATGCAGTTGTCGTTTCAATTCTTATTTTGCT ATTTTTTAATTTTAGTCAAATTAGCATGTTTTGCCCGAGCCATCCTATCC TGTTCTTAATGCATTATTAAACCTAGTTTTAATCCTATTCTTACTTTATT GTAGGATATTCAAATTTTCAATAGCATCAATCTTGGGGAAAGTGAATTAA ACGAACAAAGCCACAGATTTATTTGCTTTTTAGCTTATTATGATGGAAAT CAGATAAGCCAATTAAAATTGATTGAAAGACTTTCTGAATCGGTAAGTTG ATTTCATTAACTGTCTCTGTGTCTTTTTACAAAGCCTTTTGAATGGAATA TCTTTGTTTTGCTTGTTGTTTGTGCTTTTGGAATATGAGGGGCTGTGGCT CCACTTTGAAAGTGACAGGGCTATGATAAACTGACGAAGGAGGAATTTTT TAATTTTAGCCCTTCTAGATCGCACAGGTTTGTTTTAACGTTATTAAACA AAGTTTTTGCCCCCCCCCCTGGTGCTGCAGTGCCTGAATATGCATTTCAT TTTATTCTTTAAAAGGTTCCATTCGAGTACGTTTTCAAGGAAATCAAAGC CCTAGAAACCAAAATATGGATAATGGACCAAGTAATACATCCACATGAAA TAGATAAATCTATCGCTCAAAAATGTCAAGGCTCTGATCTCATACTATCA AACAAAGAACAAATCCGTCAAATTGCAGGTAATTTGTCAAATCTAATTTA AGATTTATAAGAAATTATCAATTTTCTTTTGAATTCTTCAGTTGTTATTT TGTATGATAAAAAGCAATGAATTTTTGGTAATTTTAAAGACCAAGAAACT TGAGCTGTTTTAAAGGAAATTAGTGTTTTCACTCAACCTAAGGGGTGTGC CAGAAATAAGTTGTTACCCTCTTTTAAAAAAAAATTCTCAAATTCTGTCT ATATTCTCAAAGCATCGAAGAATTTCGTTCATTTTGTTAAAATTGCTAAA AAATCGGGGAAAATCGACCTATCGGTAAATCCCTATTTTAACGAGAACTA ATTTGGCCAAAATAAGTTTTCGCCCGTTTTCGCTGAAATAAGTTCCTTTA AAAATGTATAATTGATTTTAATTTTAAAAGTTGAATCTGTTAAGTTTATT ACAAAGACTACTTTAAGCGTACAAACTTTCGCGAACAGAAACTTTCGCGA TTTTAAAAATTCTTTGAAGGGCCATTTGCGAAAGTTTATGATCGCGAAAA ATTCTTGACAAAATAGAAAATCAGTAAAACTTAAAACTTTTGAATAAACT TTAACATTTACGGCACTTTTTAGCCTGTATAAGTCAAAATAATAGGCCTT TTAAGCCTGATAAGTCAAAAGACAAAAGAAGAAGCATTTGTCCAAGTTTA TGCTCGCGAAAGTAAATGTTGTAAATTTAACGATTTTTCGACCTCGTGGA AGTTTCTGTTCGCGAAAGTTTGTACGCCTAAAGGGTCCGTCCACATAGTA CGTACGCAATTAGGGGGGGGGTCTTCTCAAAAGCGTATGCTTGCGTACAG GGGGAGGGGAGGGGTCAAAGGAAAATGTACGTAGGCAGAAAAAAATTTTC ATAGCCCTTTTTCGCTTGTTATACGCATCAAGGAAAAGAAAAAGTTTCTT GATAAACATTGAGTTTCATGAATGAAATAATGGTCCGAACGAAACGATTT GAATTCGAAATTTTCTTCAACTAAGGGGGGCGGGTGAGTACTTGCCAGAG GGGGTATAGCCATTTGCATACGCTTGCGTATAGGGGGAGGGGGTACTCGA TTTTCGATATTTTAGTGCGTACGTACTATGTGGACGGCCCCAAAGTGCTT TAAAATAGATAATTTCTCTATTTTTATAGACTTCTCAAATTTGTTCAATG GAAAAGATCAGACGTTCCGTTTCCAATCATTGCCAATCAACCAATATCCG TTTTGTCTGTCATCGTCAGCCAGTGATTTGCAAATCAGATGTAAATGTCA GGCTATCCTAAACATAGGTTGGTATCCTTGTGGTGAGAGATCGTGTGATA ATGGCGAAGATAAACTCACATGCAACATGTTTTATTGCCAACGGACACAT AAGTTTATTTATCTGGTAGATAAGTGGCAAGATTGTTTGAATACTACCCT ATGATAAAGCTATCTTGGTTGATAATCTCATTATTGTCCACAATACTTTT CTCTGATAATGTTTTCACTCCTTGCTAATAAAATGTGATTCGATTTGAAT TTCTTGGTCATGAAATAGTGCTTTTGAAAGACACTATGAAGTGAATTAAG TTAAAAAGGCTCGATAGTTAAATCCGCAAAAAAATGCTGAAAGCTGGGAT TTGTTAAAGTTTATTATTACGCAAAAGAAATTTCCTTTCAGTGACATACA ACCTTCTGATACATTTTCTGCATGCTGGTGGATAAGTAGTTATGTTAAAG AAATCTTTTTTTACCTCCTTTTCACAAAAAAATTGTGAAAATCTAGGATG AAAACAAAATAAAAGTAGCAAAATTTCGACATTTTGTTCCAGCGGAGTTT TCGAAAGCTTGATTCGTGGCAGCTCCATACCCTTTGATGTCACGTTAAAG TGAAATACCTTGCAGCCAACTTGGCTAGGTCTTATCGTCCTTTTTCAGTT TACTTCACATGTGTGCCAGCGTTTAAGTGACCCAATAAAAGACTTTAAGA TAATAATTAAGCGAATGTCAGAAATAGTTAAACAAAATTCTATTATTATA GTCAAGGGGGGATTAGGAGTGTCTGCCTCTAGCTAAATGTGCTTACAGAC CAAGAGTAGACATGCTTTTATAAGAACATACCATCATAAGAATAGAGGGT TTCGATGACCAATATGTTAAGAACAAATTCAGAACATTTTAAGGCTTTAC TGACTCTATAAGACTCGATTTTCAAGAAAATGGACCAAAGTACTCACAAA ATAGTGAAAATAATAACATGCTAAAACTCAAAAAGTTAAGATCCAAATAT TCCAAACAATTTTTGGATGTTCTTATTAAAAAAAACCTGTAAAGTCTTAA AAACATGGAGCTGGCTACTGTGCAGACTATGAAATACCACAATCTTCTCA GACTTTGTACATAAACAATTTGATATTGACATATATACCATTTTTAGCAT ATTTATTTTTTGATGTTATAAGTTTAGTTTTAGTTTATTTATATACCATG TTATTTTATTATGTTAGAGTATTTATCCACCGATTATTTTGTATTCTTAC ATTTATATTGCTTTTTATATATGCAAGCAAAATATTTTATATTTTACTGT AGCAAAGAAATCATTGAAAATTTTTGATCTTCAAATTGTATCAGCCTCAG GCCTGTTATTTTCCTGTCGCGCGTTTTTAT

Coding sequence (CDS) from alignment at sc0000365:163870..171149-

>TCONS_00020734 ID=TCONS_00020734|Name=TCONS_00020734|organism=Clytia hemisphaerica|type=CDS|length=3228bp|location=Sequence derived from alignment at sc0000365:163870..171149- (Clytia hemisphaerica)
ACTTCTCAAATTTGTTCAATGGAAAAGATCAGACGTTCCGTTTCCAATCA
TTGCCAATCAACCAATATCCGTTTTGTCTGTCATCGTCAGCCAGTGATTT
GCAAATCAGATGTAAATGTCAGGCTATCCTAAACATAGGTTGGTATCCTT
GTGGTGAGAGATCGTGTGATAATGGCGAAGATAAACTCACATGCAACATG
TTTTATTGCCAACGGACACATAAGTTTATTTATCTGGTAGATAAGTGGCA
AGATTGTTTGAATACTACCCTATGAGTTCCATTCGAGTACGTTTTCAAGG
AAATCAAAGCCCTAGAAACCAAAATATGGATAATGGACCAAGTAATACAT
CCACATGAAATAGATAAATCTATCGCTCAAAAATGTCAAGGCTCTGATCT
CATACTATCAAACAAAGAACAAATCCGTCAAATTGCAGGATATTCAAATT
TTCAATAGCATCAATCTTGGGGAAAGTGAATTAAACGAACAAAGCCACAG
ATTTATTTGCTTTTTAGCTTATTATGATGGAAATCAGATAAGCCAATTAA
AATTGATTGAAAGACTTTCTGAATCGATGGCAGCAGAACTTCTATGGATT
TTCAACATTTTCATCACCACGATTTCAATTACCATAGCCCATAAAGGGAC
AGTGAATTTCCTGGTACACTCATTTAAAAATGATTCAAAGACCAATCAAG
TATATGATACAGCAATAATGAATATGGAACAATCAAATTCCAACATTGAG
TTCCAGTTTCGTAGAGCTGATGACTCATTTTTCTCTTGGACAGTTTTTTT
TGAAAAGACTTCTCAAATTTGTTCAATGGAAAAGATCAGACGTTCCGTTT
CCAATCATTGCCAATCAACCAATATCCGTTTTGTCTGTCATCGTCAGCCA
GTGATTTGCAAATCAGATGTAAATGTCAGGCTATCCTAAACATAGGTTGG
TATCCTTGTGGTGAGAGATCGTGTGATAATGGCGAAGATAAACTCACATG
CAACATGTTTTATTGCCAACGGACACATAAGTTTATTTATCTGGTAGATA
AGTGGCAAGATTGTTTGAATACTACCCTATGAGTTCCATTCGAGTACGTT
TTCAAGGAAATCAAAGCCCTAGAAACCAAAATATGGATAATGGACCAAGT
AATACATCCACATGAAATAGATAAATCTATCGCTCAAAAATGTCAAGGCT
CTGATCTCATACTATCAAACAAAGAACAAATCCGTCAAATTGCAGGATAT
TCAAATTTTCAATAGCATCAATCTTGGGGAAAGTGAATTAAACGAACAAA
GCCACAGATTTATTTGCTTTTTAGCTTATTATGATGGAAATCAGATAAGC
CAATTAAAATTGATTGAAAGACTTTCTGAATCGATGGCAGCAGAACTTCT
ATGGATTTTCAACATTTTCATCACCACGATTTCAATTACCATAGCCCATA
AAGGGACAGTGAATTTCCTGGTACACTCATTTAAAAATGATTCAAAGACC
AATCAAGTATATGATACAGCAATAATGAATATGGAACAATCAAATTCCAA
CATTGAGTTCCAGTTTCGTAGAGCTGATGACTCATTTTTCTCTTGGACAG
TTTTTTTTGAAAAGACTTCTCAAATTTGTTCAATGGAAAAGATCAGACGT
TCCGTTTCCAATCATTGCCAATCAACCAATATCCGTTTTGTCTGTCATCG
TCAGCCAGTGATTTGCAAATCAGATGTAAATGTCAGGCTATCCTAAACAT
AGGTTGGTATCCTTGTGGTGAGAGATCGTGTGATAATGGCGAAGATAAAC
TCACATGCAACATGTTTTATTGCCAACGGACACATAAGTTTATTTATCTG
GTAGATAAGTGGCAAGATTGTTTGAATACTACCCTATGAGTTCCATTCGA
GTACGTTTTCAAGGAAATCAAAGCCCTAGAAACCAAAATATGGATAATGG
ACCAAGTAATACATCCACATGAAATAGATAAATCTATCGCTCAAAAATGT
CAAGGCTCTGATCTCATACTATCAAACAAAGAACAAATCCGTCAAATTGC
AGGATATTCAAATTTTCAATAGCATCAATCTTGGGGAAAGTGAATTAAAC
GAACAAAGCCACAGATTTATTTGCTTTTTAGCTTATTATGATGGAAATCA
GATAAGCCAATTAAAATTGATTGAAAGACTTTCTGAATCGATGGCAGCAG
AACTTCTATGGATTTTCAACATTTTCATCACCACGATTTCAATTACCATA
GCCCATAAAGGGACAGTGAATTTCCTGGTACACTCATTTAAAAATGATTC
AAAGACCAATCAAGTATATGATACAGCAATAATGAATATGGAACAATCAA
ATTCCAACATTGAGTTCCAGTTTCGTAGAGCTGATGACTCATTTTTCTCT
TGGACAGTTTTTTTTGAAAAGACTTCTCAAATTTGTTCAATGGAAAAGAT
CAGACGTTCCGTTTCCAATCATTGCCAATCAACCAATATCCGTTTTGTCT
GTCATCGTCAGCCAGTGATTTGCAAATCAGATGTAAATGTCAGGCTATCC
TAAACATAGGTTGGTATCCTTGTGGTGAGAGATCGTGTGATAATGGCGAA
GATAAACTCACATGCAACATGTTTTATTGCCAACGGACACATAAGTTTAT
TTATCTGGTAGATAAGTGGCAAGATTGTTTGAATACTACCCTATGAGTTC
CATTCGAGTACGTTTTCAAGGAAATCAAAGCCCTAGAAACCAAAATATGG
ATAATGGACCAAGTAATACATCCACATGAAATAGATAAATCTATCGCTCA
AAAATGTCAAGGCTCTGATCTCATACTATCAAACAAAGAACAAATCCGTC
AAATTGCAGGATATTCAAATTTTCAATAGCATCAATCTTGGGGAAAGTGA
ATTAAACGAACAAAGCCACAGATTTATTTGCTTTTTAGCTTATTATGATG
GAAATCAGATAAGCCAATTAAAATTGATTGAAAGACTTTCTGAATCGATG
GCAGCAGAACTTCTATGGATTTTCAACATTTTCATCACCACGATTTCAAT
TACCATAGCCCATAAAGGGACAGTGAATTTCCTGGTACACTCATTTAAAA
ATGATTCAAAGACCAATCAAGTATATGATACAGCAATAATGAATATGGAA
CAATCAAATTCCAACATTGAGTTCCAGTTTCGTAGAGCTGATGACTCATT
TTTCTCTTGGACAGTTTTTTTTGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011631XLOC_011631Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020734-exon-sc0000365-1575043694:170655..171149TCONS_00020734-exon-sc0000365-1575043694:170655..171149Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1575043694:166958..167095TCONS_00020734-exon-sc0000365-1575043694:166958..167095Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1575043694:166522..166684TCONS_00020734-exon-sc0000365-1575043694:166522..166684Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1575043694:163870..165370TCONS_00020734-exon-sc0000365-1575043694:163870..165370Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1510915933:170655..171149TCONS_00020734-exon-sc0000365-1510915933:170655..171149Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1510915933:166958..167095TCONS_00020734-exon-sc0000365-1510915933:166958..167095Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1510915933:166522..166684TCONS_00020734-exon-sc0000365-1510915933:166522..166684Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1510915933:163870..165370TCONS_00020734-exon-sc0000365-1510915933:163870..165370Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1491911889:170655..171149TCONS_00020734-exon-sc0000365-1491911889:170655..171149Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1491911889:166958..167095TCONS_00020734-exon-sc0000365-1491911889:166958..167095Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1491911889:166522..166684TCONS_00020734-exon-sc0000365-1491911889:166522..166684Clytia hemisphaericaexon
TCONS_00020734-exon-sc0000365-1491911889:163870..165370TCONS_00020734-exon-sc0000365-1491911889:163870..165370Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020734-proteinTCONS_00020734-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000365supercontigsc0000365:163870..171149 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.86944 8.68224 11.1195 10.2715 7.60733 5.97252 4.39083 4.43786 2.26225 2.50069 2.22066 2.10479 2.93796 1.92463 1.75597 1.20106 4.96525 5.22729 1.31853 1.28525 6.0784 6.12999 3.5821 5.2427 1.66249 3.71212 4.75287 2.8843 3.63978 3.68915
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR026315Oaf
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020734 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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