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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020715 ID=TCONS_00020715|Name=TCONS_00020715|organism=Clytia hemisphaerica|type=transcript|length=1660bp
attttgcacaaagtccaaaaaaccctatttttaggtagtttttggcccaa
atttgcccaaataatttttttctcaaaaatcgggctccgtcacgttctgg
gctcTGGGCATGTTCTGGttctaatgagccaatcctgagaaaagctggta
acagacagacggacggacagacggacggacggacggacggacggacgaac
ggacatgggttaatttaaaggacctccaccggggtacccggaggtaggtc
caaaaattaagtATAAACTATGGATAGGAGCAGCCCAATATTGTAAAATC
AAAGCTAAGCACAATTAAGGACAACTTTGGATAGTTTGCTTATTCAAGGA
TAATCTGATATCTTAATCTGATATCCAGGGACTTTTGCTCCCAAGGtgta
ttttgtttgtttcttgatttgTCCAAAGGATAACCAAGGATTGTCCTTGA
TTTGAATACCAGAGTTTCTTTCAAGAACGCACAGGTAAAGCTTTCCATTA
AATTTTCCGTCTAGTCAGATTTGGTCGGGTTTAATATTTTCCTTTAGAAT
TACATTAaaattttcctatgaaaataaaaaaaacttcttaCCTTCCTGTG
GTAAAgctacaaaaaatcttttacctcAAACATACAAGCCACTTTTTCCT
ACAAAAATACAAGttacttttttcttcagaaatacCTTAGGACCCCGTGA
GatcttttatgcgacgcaacTAAACCTGGTCCATTTCAAAGAATGAAGAA
TTATTCGGTAACATCTTTAGATACTTCATTCTTTAAAATAGACCAGGTTT
GGTTGCATCacataaaagatgtcacgggttCTAAGGGTTTTGTCCCCTAC
TAATATTCTGCAAGTATTTTCcctcaaaaatacaagaaactTTTCTACGT
CAAAAATTCCGAAAGCTTTCCCTCAATATACAAGAagctttttccttcaa
aaattcaattccttcgaaaatgaatgaataaatgaatttttccctattaa
aatacatgaaaaattAGGGGCGTTCATATTCACTGACTTAGAAACaattt
accttatcggggaaaaaaatgtcgggggaaagtgacgaaattttcaggGG
ATGACGAAATTTATCCCTGACATTATATCACCCAACCTAAACTTTTACCC
GAtctttttatccccgaccaaaacttttacccgaaaTTTTATATCCCAAC
taaaattcaaatctaattttttagACCTTTATTTACCAAAATTAATGCTT
TAAATGTCGAATTAAAACATCTGTTTTCAAGCTAGtaaaggaaaccattt
catttagACAAATTAGATTGATCGAAATGACTAAACTGTaaatttggtcg
ggggaaagtgacgaaaatgcctctaggtgacaaaatttttccccgacatt
ttttccccgatataaggtacattttcagcttttatatcaaaaattttaac
catgaatatatttgttttcttgaatttttattacCTTTAATTAGctagat
atatttttttcttttaacaaGATTAATTGACTTCCTTTGTTTGGAAATAG
TTGAGCGATTTTCTAGGAACTTCATTTTGCTAATTAATGGCTATTAAAGA
AGAGATATTTAATTGCATTTAGGAATCTGAATAAATTTGAACCTCTATCT
TTAATTAACT Run BLAST on NCBI transcript from alignment at sc0000363:20854..22513 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020715 ID=TCONS_00020715|Name=TCONS_00020715|organism=Clytia hemisphaerica|type=transcript|length=1660bp|location=Sequence derived from alignment at sc0000363:20854..22513 (Clytia hemisphaerica)
AGTTAATTAAAGATAGAGGTTCAAATTTATTCAGATTCCTAAATGCAATT
AAATATCTCTTCTTTAATAGCCATTAATTAGCAAAATGAAGTTCCTAGAA
AATCGCTCAACTATTTCCAAACAAAGGAAGTCAATTAATCttgttaaaag
aaaaaaatatatctagCTAATTAAAGgtaataaaaattcaagaaaacaaa
tatattcatggttaaaatttttgatataaaagctgaaaatgtaccttata
tcggggaaaaaatgtcggggaaaaattttgtcacctagaggcattttcgt
cactttcccccgaccaaatttACAGTTTAGTCATTTCGATCAATCTAATT
TGTctaaatgaaatggtttcctttaCTAGCTTGAAAACAGATGTTTTAAT
TCGACATTTAAAGCATTAATTTTGGTAAATAAAGGTctaaaaaattagat
ttgaattttaGTTGGGATATAAAAtttcgggtaaaagttttggtcgggga
taaaaagaTCGGGTAAAAGTTTAGGTTGGGTGATATAATGTCAGGGATAA
ATTTCGTCATCCcctgaaaatttcgtcactttcccccgacatttttttcc
ccgataaggtaaattGTTTCTAAGTCAGTGAATATGAACGCCCCTaattt
ttcatgtattttaatagggaaaaattcatttattcattcattttcgaagg
aattgaatttttgaaggaaaaagctTCTTGTATATTGAGGGAAAGCTTTC
GGAATTTTTGACGTAGAAAagtttcttgtatttttgaggGAAAATACTTG
CAGAATATTAGTAGGGGACAAAACCCTTAGaacccgtgacatcttttatg
tGATGCAACCAAACCTGGTCTATTTTAAAGAATGAAGTATCTAAAGATGT
TACCGAATAATTCTTCATTCTTTGAAATGGACCAGGTTTAgttgcgtcgc
ataaaagatCTCACGGGGTCCTAAGgtatttctgaagaaaaaagtaaCTT
GTATTTTTGTAGGAAAAAGTGGCTTGTATGTTTgaggtaaaagatttttt
gtagcTTTACCACAGGAAGGtaagaagttttttttattttcataggaaaa
tttTAATGTAATTCTAAAGGAAAATATTAAACCCGACCAAATCTGACTAG
ACGGAAAATTTAATGGAAAGCTTTACCTGTGCGTTCTTGAAAGAAACTCT
GGTATTCAAATCAAGGACAATCCTTGGTTATCCTTTGGAcaaatcaagaa
acaaacaaaatacaCCTTGGGAGCAAAAGTCCCTGGATATCAGATTAAGA
TATCAGATTATCCTTGAATAAGCAAACTATCCAAAGTTGTCCTTAATTGT
GCTTAGCTTTGATTTTACAATATTGGGCTGCTCCTATCCATAGTTTATac
ttaatttttggacctacctccgggtaccccggtggaggtcctttaaatta
acccatgtccgttcgtccgtccgtccgtccgtccgtccgtctgtccgtcc
gtctgtctgttaccagcttttctcaggattggctcattagaaCCAGAACA
TGCCCAgagcccagaacgtgacggagcccgatttttgagaaaaaaattat
ttgggcaaatttgggccaaaaactacctaaaaatagggttttttggactt
tgtgcaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020715-exon-sc0000363-1491911889:20854..22513 | TCONS_00020715-exon-sc0000363-1491911889:20854..22513 | Clytia hemisphaerica | exon |
| TCONS_00020715-exon-sc0000363-1510915933:20854..22513 | TCONS_00020715-exon-sc0000363-1510915933:20854..22513 | Clytia hemisphaerica | exon |
| TCONS_00020715-exon-sc0000363-1575043694:20854..22513 | TCONS_00020715-exon-sc0000363-1575043694:20854..22513 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000363 | supercontig | sc0000363:20854..22513 . |
Blast
The following BLAST results are available for this feature:
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