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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020527 ID=TCONS_00020527|Name=TCONS_00020527|organism=Clytia hemisphaerica|type=transcript|length=1239bp
CGGTtcgtttttttcttctaaagaaCATCATTGGTGTTTTGATAAAAAGT
ACAGTACATAAGGGTTGCATTTGAATAGCTGGTTTTCTGAAGGTTTGATT
GCTTGTACAGTATTTTTGGATTTAAACCTACTTTGTAAGTTACTAGAAAA
AGTCCTACCGGATCTGTGATAAGGGGGTGTTTTAATTTCACAATTGGCGG
ctgttgtttttcaattttggaaatAGTTGCAAGTGAACTATGCTGCATGG
TAATTTGACCCTTGTCGTATGAGCTCTAGTGTATGTTAGTACAACATTCA
AGCCAGAGGAGTTCAGAATTTTCTATTAACACGGCTGGCGAAATGTTAGT
CGCTGAATTGTaatacaaccctgtctcacagtcctggtggaacttttttc
ctcagtggggataaaaattcctattgaaatcccaatggggatggaaattc
tattgttcaaaggttaaaaaatccagtggggatggatttggagtgcaatt
tttaaacatttaattttgaGTGGAGATGAAAtataagtcaatttcccagt
ggggcttaAAGTTCAGGGTATTTCCTACCGGGGACAAAaatgggtctgtg
acacaggagtgTTGTAATGAGACGCATGATGAACAATTTCCACTTTTTGA
TGTTACTGAGCGCTACCAGAGATAAGAGAGCAAAAGGATCGAGGTACTGG
GTTCGATTTTGACCCTTGACAGACTTCAAGTAAACAAGGGTTTCGTACAC
TTAATCTTTCGGTGGGATTTGATGGGATGACCTCCAAGGAAATAGTTACC
AGTTCCTTGTTTATTTACTCAAGGAGAAGGAACTTTTAAGTTGTGTTTTT
TCAGATTATGTTTTAGGCGGTAAAGCTTTATCTTTTCTTCCTTCTTTTGT
TATTTGGCTTTCACCGCGCGACTGTGTCAGACATTCCTTAAGAAGCTCTA
TATTTAGATAAATAGAATGTTTGTTTGGGGTCCCAGGGaccttcaaagtt
taaaaagtttgtCTAATACTGTACACCTTGCACAAATGTTGATTGATTGG
AGAGGTTGTTTTTTCCGTTTTTCAAAGCAAAAGGAATATGCTCTCTTCGT
CCTTCCAGACAATTTCCGCTTTTTGTCAAAACAGGATTTCGGTGACCCAA
AATGTATTGCACTCAATAACATGCAATCCTTCGAAACCTAAACCAAATCC
CATAGATCCTTCCGTTATATACAGTATAGTCTACGTAAA Run BLAST on NCBI transcript from alignment at sc0000357:80622..81860 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020527 ID=TCONS_00020527|Name=TCONS_00020527|organism=Clytia hemisphaerica|type=transcript|length=1239bp|location=Sequence derived from alignment at sc0000357:80622..81860 (Clytia hemisphaerica)
TTTACGTAGACTATACTGTATATAACGGAAGGATCTATGGGATTTGGTTT
AGGTTTCGAAGGATTGCATGTTATTGAGTGCAATACATTTTGGGTCACCG
AAATCCTGTTTTGACAAAAAGCGGAAATTGTCTGGAAGGACGAAGAGAGC
ATATTCCTTTTGCTTTGAAAAACGGAAAAAACAACCTCTCCAATCAATCA
ACATTTGTGCAAGGTGTACAGTATTAGacaaactttttaaactttgaagg
tCCCTGGGACCCCAAACAAACATTCTATTTATCTAAATATAGAGCTTCTT
AAGGAATGTCTGACACAGTCGCGCGGTGAAAGCCAAATAACAAAAGAAGG
AAGAAAAGATAAAGCTTTACCGCCTAAAACATAATCTGAAAAAACACAAC
TTAAAAGTTCCTTCTCCTTGAGTAAATAAACAAGGAACTGGTAACTATTT
CCTTGGAGGTCATCCCATCAAATCCCACCGAAAGATTAAGTGTACGAAAC
CCTTGTTTACTTGAAGTCTGTCAAGGGTCAAAATCGAACCCAGTACCTCG
ATCCTTTTGCTCTCTTATCTCTGGTAGCGCTCAGTAACATCAAAAAGTGG
AAATTGTTCATCATGCGTCTCATTACAAcactcctgtgtcacagacccat
tTTTGTCCCCGGTAGGAAATACCCTGAACTTtaagccccactgggaaatt
gacttataTTTCATCTCCACtcaaaattaaatgtttaaaaattgcactcc
aaatccatccccactggattttttaacctttgaacaatagaatttccatc
cccattgggatttcaataggaatttttatccccactgaggaaaaaagttc
caccaggactgtgagacagggttgtattACAATTCAGCGACTAACATTTC
GCCAGCCGTGTTAATAGAAAATTCTGAACTCCTCTGGCTTGAATGTTGTA
CTAACATACACTAGAGCTCATACGACAAGGGTCAAATTACCATGCAGCAT
AGTTCACTTGCAACTatttccaaaattgaaaaacaacagCCGCCAATTGT
GAAATTAAAACACCCCCTTATCACAGATCCGGTAGGACTTTTTCTAGTAA
CTTACAAAGTAGGTTTAAATCCAAAAATACTGTACAAGCAATCAAACCTT
CAGAAAACCAGCTATTCAAATGCAACCCTTATGTACTGTACTTTTTATCA
AAACACCAATGATGttctttagaagaaaaaaacgaACCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020527-exon-sc0000357-1491911889:80622..81860 | TCONS_00020527-exon-sc0000357-1491911889:80622..81860 | Clytia hemisphaerica | exon |
| TCONS_00020527-exon-sc0000357-1510915933:80622..81860 | TCONS_00020527-exon-sc0000357-1510915933:80622..81860 | Clytia hemisphaerica | exon |
| TCONS_00020527-exon-sc0000357-1575043694:80622..81860 | TCONS_00020527-exon-sc0000357-1575043694:80622..81860 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000357 | supercontig | sc0000357:80622..81860 . |
Blast
The following BLAST results are available for this feature:
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