TCONS_00020386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020386
Unique NameTCONS_00020386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2137

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020386 ID=TCONS_00020386|Name=TCONS_00020386|organism=Clytia hemisphaerica|type=transcript|length=2137bp
GAAATTTAGTTGAATCAATACTCTAAAACAAGcagaacattttgaaattc
gaaaatttaTTCATAAGAGTACGAATGTTTTTATAGattgttttttcata
taaaGGTGTTTTGGTGTTACAAGGCCGAACCCCTTTGTATGAAGAAAATG
GAGAACTTTAATTTTTGGTATTTAATATTATATTTCTCTCACTTGAATCG
ACTTGCGTAAGCAGAACAGAATGTCTAGAATAAAGaaTCAACAGAAGGAT
TTCACAACCATGCAACTGAAGGAAATGGATAAAGAACACAAAAAGCAACT
CCACATCCAACGAGATGATTACGAAGGAACCATCAAACGACATCTCTCAT
TCATTGACCAATTGATTGATGATAAAAAAGTGCTGACTAAGCGCTGTGAA
GAATTGGTCTCTAAACTAAAAGATATTGATCAGAAGTACACGGCAAAGAT
TAAACAAATTACCGACAGTCATACGATCGAGATGAAGAAACAGAAGGAAA
TCATGGAAGCGGCCGAGAAAATCCGCCGTGAAAAATGGATCAAAGAGAAA
ACGCATGAGATTAAAGAAATCACAGTCAAAGGTTTGGAACCGGACATACA
AAAATTAATTGCAAAACATAAAgcagaaataaagaaaataaaagcaaTGA
AACAGggtGAGATTTTAGAAGCTGACGAACGTGTTGGCCGTAAATATATC
CAACAATTAGATGAACTTCGAATGCAActtgagaaagaaaaagaaatggc
TGTCAGAAAAGAAAGAGATATCGCTAGACAAAGGTTTGAAAGCCAACTCC
GCGAAGAAGAAGAATCTTTCCAACAACAACGCAGACGTCTTCTCAAAGaa
gttgaagatgaaaaagaaagatTGGCAGAACAAACACAAAGAATGAAAAG
TGACTTCGATGAAAAGAAGAGTGCGTACGAAATAACATTACGACAAACGT
TAACGCACGCTTCTACCGATCATGACAAACAGTTGAACCACTTAAGAGAT
AAACACCTgAGTGAAATGCAGactttaaaagaacaacttGATATAGAGCG
TCAACAATGGAtcgaaaattatatgaaaaaacaaGAAACCGTATTACTGG
CCAAAGAACGAGAATTGAAAGAAGGTGTACGTGAATCACGTGATAAAGAG
ATTGAAATGGTGATCGCCCGCTTGGAACGCGAGACGGCCGAAGCGCGTGA
AGAATCGGAAAGAGCATCTGAGAATAGGACAAAGCGAATACGAGACAAAT
ACGAAACAGAAATCAAAGAGCTTGAACATTCAGAACGCCACATACAAGAA
AAATGTAAATCACTCAAAGAACGAGTCGAGGAATTGGAAAacgattgtat
tcgattgaaAAGCGAACGGAAATCGAAAGATCAAGAATTAATCGATAATC
AGAAATTAACGAGTCGTTTACAAGAGGAACGAGGCAAAGTTACCGATATC
ATTCGACAAGAATTCGCTGATAGGCTTGTGATATTAGAAGAAGAATCGAA
GCGGTTACGAAGTGAGTTAAGTGAAGAAAAAGCACGCCATAAATTCGACG
TCGAAAAAGTCACCAATGCTAAAGAAGAAGAGTTAGAAGAAGTACATAAA
AGAGTAAAGAAAGCGAtcatgaaaaaagaagaaacgacGCAATTACTGAG
GGATCAAATGATGGCTGCGGAAAAAAGGGCTGAACACTTGGAACAATTAT
TAGCGGAACAGCGGAAAAAGATTCTGGGTAAATAAAGAATCACTCATTCC
GTCGTGAGCTTTTTCCTCCTGGTAAGCTCTGGCTTTGGCTCGTCAGATTC
GACTAATCTTTTCTCAGGTTTTTTATTCAAACTATCCCGTTTCATTGTca
cttatttatattttttacttctttttttgATTGCAAGCCTTTTTTTATTA
AAGACAATCCAGTTTGAAAGCGAGGTTATTCCTAACTTAGTCATTCCTTG
TATTTCTTTTCCAATTCTTCGACCTACTTCATTTCTTTTTGTACACTTAT
TGCCATCTCTATCTTCCCTCAATAATGTTTGTTGGGGTATAAACGAGTGA
CCAGACTTCAGTTATTTTCAGCCGTTTTTACTGAGCAGTTCGACTCTGTT
acgtaccgtaagttggtctaatgtcgacgtccctttt
Run BLAST on NCBI

transcript from alignment at sc0000355:273946..287733-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020386 ID=TCONS_00020386|Name=TCONS_00020386|organism=Clytia hemisphaerica|type=transcript|length=13788bp|location=Sequence derived from alignment at sc0000355:273946..287733- (Clytia hemisphaerica)
GAAATTTAGTTGAATCAATACTCTAAAACAAGCAGAACATTTTGAAATTC
GAAAATTTATTCATAAGAGTACGAATGTTTTTATAGATTGTTTTTTCATA
TAAAGGTGTTTTGGTGTTACAAGGCCGAACCCCTTTGTATGAAGAAAATG
GAGAACTTTAATTTTTGGTATTTAATATTATATTTCTCTCACTTGAATCG
ACTTGCGTAAGCAGAACAGAATGTCTAGAATAAAGGTATGGTTGGCATTT
TTACAAGCCTACCCATTTTTCCCTTTAAGATTTGATGGTATTTGGAAAGT
CTATAACATCACAGTTTACTTTCGCTAATTCGAATTCGAACGGGGGAATC
TTATTTGTTCAAATTACAGAGAGATTTTTGAATTATAGAAAGTATTTTAA
GTGATTTCTCTTTGACCGGGATTGGGAAAAAGTTCGGATTATAGAAAGAA
TAAGCAAGATTATACTGTAATCACTGTTCCTTCGAAGACCATCAGTTGAA
CGCGGCTGAAATTTTGCTACACAATTCGAGAAATCTAGGAAAATACTTTT
AAGCCCTTAAAAGTAAAGAAAACTTAAGCATAAAAACATCTGTGTGGAGG
TATCGAAATATTAAGAAACTAGCCGGTACCCGGCGTCGCACGCCGGTTAA
GCTGTAGCTGAACGCACTAAAAGTCCTTTGGATGTTGAAGCTGGCTAGCT
GGCTTAAAAAAGCGGTCAAATAAAAAAAAGAAATCTGTACAACGTTTAAC
TCTAACCTTCCCCGGGTGTCATATCTTTTAACCATATTTGGATCGTTTAC
TGCCCCCCCCCCTCCCGAGACATAATTTTTTGTTTAAGTCAAAAGTTATC
AGAAAGAGCATCGTTTACTGTACCAGTGTCGTTTGAAACGACTCTACAGG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGGCTAGAAGTCAATCTCCTTGGTAAGATTTGAAGCCA
ACAAATCCTACCAAAGTTGCGCAGCCTTGAGCGGCTCGCCTGGTTTTTAC
ACAAATGACATTAATACTAAAATTTACCTCTAAATTTCGAAAAAAATATC
AATCGTAAACAAAGGAATTGCTAGATTCAATCTGTCGTCAAAAATACGGC
GCATTTTTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAACTTTAGCTCTTCGGGCT
TTAAACTCAATGGTAACGACGGCTTGAATATTTTTATAAGAAAAAAGAAG
TGAACTAATTTTTTCTTATGCTTTATATCGCTCTTTGAATGCTGTTGTTG
TCCACAAACCTTTTTATGTTTTGATTTACTTTTTAAATATTCTTTTCTAT
GAAATGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGTGGAGCAAGAGACT
AAAAGTCATAATTTTAAAACACAAACAAAGCGAAAACGAAAGTGGTGACA
CACAGACACACAAAGCACCGCTATTAATATATAGAAGTCTCAGACAAAGC
CATCATTAATCATTGGTTACACTTATATAAAGAGCGTGTAAATTTTGAAT
TTTTGAATCTGTTTTTCTCACTGAGCTTTATATAAACTCTGTTTGGAAGT
TTTTCAATCCCGGCCAACCAAAATAATTCGATCGAAGATTTTTTGAAAGT
GGTACTCATTATCTAACACTACTCAATGCTTGTGTTGCCTAAATCTAACA
GGAAATGCATTTGATGTAGCCAGATCCATCATGTTCCAATCCGTTCAAAG
ATGGGGGATATAACTTAGTCCATGGTTTAATACTATAAGGTCCAGAATAG
TAGGGGGTCCTAATAAAAGGCAGTCCGAAATTGTACCTCCTAAAAAACCC
CAAAAAAATATTTTCACAGATCAACGAACGGGGTGTCCTAATAAGAATGG
TCCCGAAAAATTTTGGAAAATTAATAAGCGGGAAAGATCAAATCAAATCG
AACAAGCTTATAAGCAAAGGGGAGGTCAGAAATTTTTTTCAAATTTAATA
AACGGCGAAATTGTACCTCCTAAAAACCCCCCAAAATAAGGTCCCCTAAA
AAAGGTAATTATGAGTTAAAACCAGGCTATTTAGAGCAATTCAGATTGCG
ATAATTGAAATATTTTGAAAATAAATAAATGGGAGGTCCTAATAAAAACG
AGGGGTCAAGATCTTTTGGAAGTCAATAACCGGGTGGTATTCGGGACCTT
AGAGTAAAGGGACCGTAGTGCAGTGGTAGAGCACCCGGCTACGGTTCGCA
AGGTTGTGGGTTCAACCACCGAGTCATACCAAAGATTCTCAAAATAGTGC
TTGATGCCTCTCTGCTTGATGTTCAGCAATTAAAAGAAGGATCAAGGGTA
AGTGGAGAAAGAGTGGCGACTTTCTACTTTCTACTTTCTAAAGTAAAGGT
CATTAGTTTTTTTTTCTCTTTAGAATCAACAGAAGGATTTCACAACCATG
CAACTGAAGGAAATGGATAAAGAACACAAAAAGCAACTCCACATCCAACG
AGATGATTACGAAGGAACCATCAAACGACATCTCTCATTCATTGACCAAT
TGATTGATGATAAAAAAGTGCTGACTAAGCGCTGTGAAGAATTGGTCTCT
AAACTAAAAGATATTGATCAGAAGTACACGGCAAAGATTAAACAAATTAC
CGACAGGTATTCAATATTTTATATAATTACCGCTGGGGTGGGGGCATTCG
ATCTGAAAACTACCGTATGTGTATCCCAAAAGTAGGCCTTTAAAATCGGA
CTCTTACAGTACAGAGAAAATTTATCCATAAAAATCGACACTTAATGTGC
ATTTTCTTGGAATTTTTCGTCCTTTTTTGTTCTCGCTTTTTACACTTTTG
CAGTGCACTTTCTTGCATTACTTGCTCTTATTTCGACCCTTACAGTGCAC
TTTTGGGAAGCTCGAAAAACGTACCCTTAAGGGCCGCAACTATGGTCCCC
GAATGCCCCTCCCCCCTCCCCCGATGGATTACCCATACCCATGTGTCAAT
GCACCAGCATTTTTAAACTAGTGGGAATTGTGTAATGGATGGGGGTTTCA
GATTCTCTATTTATCAACTCGGAAATCTAGTGGTGGTGCAGGATAAAGAG
CATCCGATGATACCACCCGAATTTACTTATCATACAAATTTAAATGCAAG
AGTTGATTAGTTTACTAACTGACAAACGCTGTTTGTACTTTCTGTACCAA
AACTCTTCATTTCATCATGGTTTGCAGTCATTCGATTTTACAAGACTGAT
TGGTTTGAGAAATAATGATTTTTGTGCCTTGATTGATTTACGCGTTCTTT
TTATGATAAAGAACTTTAAATTTGTTAAGCCTTTGGATGCTCTTAACTTT
TTGAGTTTCAAGCCCAAAAATGTTCTCAAAATGTTCCTAATATTGTGACC
TTCGAAGCCTGATGTTTGTATATAGTTTGCTCTTATAAAATGAAATTCTT
TTGTTTTGTTGCTTTTTCAGTCATACGATCGAGATGAAGAAACAGAAGGA
AATCATGGAAGCGGCCGAGAAAATCCGCCGTGAAAAATGGATCAAAGAGA
AAACGCATGAGATTAAAGAAATCACAGTCAAAGGTTTGGAACCGGACATA
CAAAAATTAATTGCAAAACATAAAGCAGAAATAAAGAAAATAAAAGCAAT
GAAACAGGTATGATTCAACATTTTTTTTTCCTTTCAAAAACTTTCACTGG
TTATCATCCTTGACCCCCGCCTGGGAGGCCCGAGGTCGATACCCACCGTG
TCTCTACGATTCACTTGGCAAGTGAATATACCTTCGCCTGGGTTAACCCA
TGCCATGTGAGGGAATTGGGTACCATCACTCTGATACAAGAGTGTGGGTA
GATTGGACAGGCATTGTGACGCGCCGTGGCACTCATAAGGTTCGGCCTCT
AGTGAGCATCGCTATCCAAGTGTCTTTGGAGTGTCATAGTATACACCATG
GCGCTCGCGTCTGTCAAGTCGAAGTGTCTGTCAGCGGTGTGATACTCCCG
AAGGAGTAGGAACCATTCCGAATGTATTTTATAAGATACTTTAATAATTG
GTCATTTGAAGTAATTAAAGTGACGCGTTCTTTAGAAAAAGTTACAAAAT
TTACAAAGTTTTATTACTGGTTAACGACCAACCAAATCAAATAAGAGCTT
GTAAAAACTCCATCTCTTCCCGTATTCGGAGGGCTGATATTTATCTTCAC
TGAAAGAAGCAATCTTACTCCAGTAGATGAGACACCGGATTGTTTTATCA
TATGGAGCATTGCTATATAGGACAACTCCCAAATCCTTAGCAACAGACTA
CCAAAATATTAAGCTTCGTGAATTTCAGAACGATTTATTTTCATTGGAAA
GCATTTTCTAAGCTACAAAGTTTTTTTTCATGCAATCTTTGACTCGGCCA
TACAATACAGGCTGCAATAGCGAGTTTATATATCTATTATTCTTGTGGAC
AGAGAGACGATTGTAAAACAATCTAAAACAGATACCCTTATCGGCCCTTT
TTACGCTAGCCCTTATTGGCGTTATTTTTAGGCTCTTGACGTAATAAGGG
CCGGCTTTAAAAGGGCTGGCGTTAAAAGGGCCGGTGTAAAAAGGGCCAAA
ATTTCGCAAGTTTTACTTAAAAGTGGCGTTAATTTTTGACCATTTTTCTC
TATTTAAAGGATTTTAGGTATGATTCAAAGATAAAAAATTATCCATTGTT
TTACTCCATATCTAAACATTTTAATGTAAATTGAAGCATAAATACCCATT
CTAACAAATTTTGGCGTTATTTACGGCCTTAATTGGCGTAAGCCCAAAAT
CAGGCTGTGGCGTAATAAGGGCCGGCGTAAAAGGGGCCGGCGTTAAATTG
GGGCCGGCGTAAAAAAGGCCGATAGGGTAGATAGATATGATAGATATGAG
CCCTCCGAATGCATTCGGGATGGGTCCTACCCACGAAGGAGTAGGAATCA
CGGCGCTGACAGACGCGAGCTGCAAAGCCATGGCGTATACCATGACACTC
AAACGACACTGGGAGAGCGGTGCTCACGCGAGGCCGAACCTTATTAGTGC
CACGGCTCGTCACAATGTCTAATCTATCCACACTCTTGTATCAGAGTAAT
GGTACCAATTCCCCTCACATGGCATGGGTTGACCCGGGCGAAGGTATATT
CACTTGCCAAGTGAATCGTAGAGACACGGTGGGTATTGAACTCGGGCCTC
CCAGGCGGGAGTCAAGGATGTTAACCACTATACCACTACGCCTATTCCAC
TACAACCTAAAACAAACTGCAGTATTGAAGATCATTCATAAACTCGCTTA
AATGTTTTAATATGGAAAGCAGAATTTTTAAATTCAATAGTGTCTCTAGT
GTTAATATTTTACTTCAATCATACTAAAATACCAAACGTTTTTTGTTTTT
TTTTTTACTTATCTGGAGGTCCTATAAATTAATCTGTGTTCGTTTGTCTG
TCCGTTCGTCTGTTACCAACTTTTCTCAGGATTGAATCATAGGAATTTTG
TGATTTTTGGTACAAAGGTGAAAACCAAAATTTAACGGAGCCCGATTTTC
GAAAAAAAATATTTTGGGCCAATTTGGGCCCAAAAATGCCCAAAAATAGG
GTTTTTTGGACTGAAAAATTTGTTGATTAGTTTTCCTAATTTTTTGTACA
AAGACGTAGAAATACAGTGTTCTAAATATGAAAAAGTTCATTTTTCGAAA
AAGAAATTTGTCTACATTGCCTTCATTAAACTTTTATTATTCGTTTTATA
AACAGGTAGGTCCATAAAAGTATCGCTTGTTTTTCATTTTTCAGGGTGAG
ATTTTAGAAGCTGACGAACGTGTTGGCCGTAAATATATCCAACAATTAGA
TGAACTTCGAATGCAACTTGAGAAAGAAAAAGAAATGGCTGTCAGAAAAG
AAAGAGATATCGCTAGACAAAGGTATGGACGAATTATTTACTGACGACGA
TGAGTTAGCTTCAGTTTCATTCGAACGTTCTTAAGTGGCTTATTAAAGTT
CAACCATTTTAATGATGCGAAGCATCAATTTTACACCGAGTGCGAACCGC
CCTTTAGTGGGCGTATATAACGTTAACTTGACTTTTTAATGACTTCACGA
AAAAACCGCCACTTTGGCGGAATGGTGCATGCTATTGCTAAACAAACATC
CGGATCCCAACATAGTAAAACCGATTTACTTTGGTATTTTTAAGGTTTAA
AAGTTTTAATGATATATGCCATAGTGTTGTTTGAAGGTTTAATAAAACGT
AAGAGGGATTTAGAGTTGTAAAGGTTTTGTTTTTAAATAAGTTGATATCG
TTTGCCCACTCATCAATTTTAATTTACAAATGTGGAGCAAGATTGGTCAG
AAAGAGAGAAAAAATCAATTTTTAATTTATTCAGCATAAAACTGAACATA
ATGGGCTCTTCCAATCTTCTCAAGGAAATGTTCGTACATAGGGGATGGAG
GATTAGGGTCTGGGAAAATCTAGTGTCTGTAAAATCTAAAAAATTTGCCC
TGTCCGGGGGGTAAAATTCCTCTGTTTGGGGGTAATTTTACTCGGTTTTA
GGGTTATTTTAAATGTCCAGGGGGTCAACTGATGCTTGTCCCGGGGGGGG
GGGGCAAAAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGTC
AAAAGTCGAATGTCCGGGGGTCTATTTTTTTCTGGGAAAGTCCAATATAA
TAACAATAGGAGACACCGATCTGATATAAAACATGTGTCTGATATGAAAC
ATTTAAGTAAAAATACAACCTTTAAATATGAAATGTTGTCCCTTTGTAGT
AGCATGAGCGGTAAAAAGAATTTGCTGCTCAGCTTTGGTTACTTTAAATT
TTCTTAAGACGGATAGGTTTATTAAATAAAATTTTATTAAATAAAATCAA
TGTTAAGAGTTGTACTGAAAATTATAGTTTTAGCTTACTAGCCTTCTATT
TGAGAGTCTGCTAAAGTAAAGTGAGATCTATTATGATAGGTAGGTTGTTT
CGATCTGTGAAGGCTCGTGTGAAATTCGAAAACATCCAGCAAGAACCTAG
GTATAGGCTTATACTGAAAAATTCGATCTGTTCGCCAGAAGTTTCAAAAA
TCTTATTTCTACAAATTTAGACCTCTTTCCCCTCAAAAACAAAAGTTTTA
AACTTAAACTGTCCTCCCTAGAAAATATGATATGTTTCTACAATTTCTGA
GTTAGAATTTTGATATGTTTTTCCAAGGTATCGGATCTGTTCCTTTAGAT
TTATTTTAGGTTCCTTAAAATCCTAGAAATCTTTCTCTGTTTTCCTTTAG
AAAATGTTTCCAATGCAATGTCATATTTTTGGAAACAGATATCTGTTTCT
CAATTTATTTTGCCATCTACTAGAAATTTTGATTTTTTTCCCCAATGATG
ACGTCATCAGCTGGAGCAAGGAAACAAATGATTGTAAGAAAATTGTCCTT
CTTAGAAATTCTGATCTGTTTCCCAATTTTTCGGGTAAAAGATATCTCCT
GGGAAACAGGCATTTTAGGGAAACAGGCTCGTCGGCTGCTTCTGGAAATA
GCGTCATTTGCTTATTACTTTCTGATGTGACTTAACTTTCTTTTCTTGGG
ATAGAGTTTTGTGTATCACTGCCTCTTGGTGTGGTTCTACTTCTTGGGTC
GTGAAAAAAGTATTTCTCGCCAGCACTGAAGGTTTCTCTCTTAATTTTTA
AGACCATATATCATAGACAAGCTTACGATATTAACATATTTTAACATTTT
CTGGTGAATGAATGATTAATGTCGCGGTTTCGTTTGTTGCTTTAAAGATA
TTTTTATATTTACGGATTTTGAATTTTGTCTTTGAACTTAACATCTGATT
GAAACAAAGTGACTGAATTTATCTAGCTTCGATTTCTGGGATAGCGGGTC
ATGTGAGCTCAAAAATTGTGAAAAAAATTATTAGATCGTTTTCTCCCTTA
TTTATGAATACGAGGTTTCTACATACTGTTTTGTAATTAATAATTAAAGC
CGAAAAAATTCAGCTCCTCCGAACTTCCCGCAAAGTAATACTGTATGAAC
TATTTCTCAAAATGTGTAAAATAAATCCTTTTTAGCCTGGCTCTTATTTA
TCCCTTATCAATGAGACATATTTTCTATCTTCCTAGAATAATAGCTTCTC
CAGTCGAAAAATCTTAAGTTTCCCTTGATAGAGCTTTTTCCTCTCCAGGG
TTGAACGACGATTTTCCAGCGTTCCCAGACCAGATTCGGCTTTCAACTTT
GCGAACTATATTTTGTTTCNTTGTTTTAGGCTTGAAAGCCAACTTCGTGA
AGAAGAACTTTACTTTGTTTCAGGTTTGAAAGCCAACTCCGCGAAGAAGA
AGAATCTTTCCAACAACAACGCAGACGTCTTCTCAAAGAAGTTGAAGATG
AAAAAGAAAGATTGGCAGAACAAACACAAAGAATGAAAAGTGACTTCGAT
GAAAAGAAGAGTGCGTACGAAATAACATTACGACAAACGTTAACGCACGC
TTCTACCGATCATGACAAACAGTTGAACCACTTAAGAGATAAACACCTGG
TAAAAGTTTTTCAATTATGAGAGTGGGCTGTTCCCTTTAATTTCCATACA
AAAAAAAATTCTTCACTATACGTGGATACCCTCTGGAAAATTATCAAAAA
TATTCATTTTTATAAGGGATGCTCGAAGGGTTAAAGTGAAGGTGGACGAA
CAAAAATTAGTCATTTACCTCTCCTGGAATTTATAGAATAACTTTTTACC
CCCTAGAAAAATGAAAAAAAAGCTTTCCTTAGTCCTCTTCGAAAGTAATA
GCATACAGTTGATCTTCAAGAGAGCAAGAATTTCTTTTCGAATTATAGAA
ATATTCGAATTACAGCAAGTATGTTGTACTAATTTCCAGGTGAGACGATC
AATATTTTGGTTCAAGTTGTCTAAAGCTTCGAATAGTGTGGGGTTCGAAT
TAGAGAGAGCTAGCTTAATCTTTTTTTTACTAATTTTTTTTGTCACCAGA
GTGAAATGCAGACTTTAAAAGAACAACTTGATATAGAGCGTCAACAATGG
ATCGAAAATTATATGAAAAAACAAGAAACCGTATTACTGGCCAAAGAACG
AGAATTGAAAGAAGGTGTACGTGAATCACGTGATAAAGAGATTGAAATGG
TGATCGCCCGCTTGGAACGCGAGACGGCCGAAGCGCGTGAAGAATCGGAA
AGAGCATCTGAGAATAGGACAAAGTAAGTGATGCAGGTTTCATACACGTT
TTTATAAGAATGGTGTTTTCAATTTCATCATGGATATTCTCAACCTTTTT
GGGGGAAAATTATCCTAAAATATTCTTACGATATTCCTAGGTTAGGATCT
AAATTCAAACCTAAATTTGGCATAAAATTGCATAAATATTGTGAAAGCTT
TGAGCCTTACACTGAGGGACATATGGCAATTTGCAGATAAAAAAGGTTCA
TTTGCCACATGTCCATGATGGTATTCTTTAGTCTAAAACCAATTTCATCC
TGAATATTCTTATAGAGTACATTCTTATAAAAAAACATATTTGAATCTCT
TTATAAGTCGAACTCAAGCATTGGTCCAGTCAGCTTAGAAGTCCTATAAA
TTACTCTCTGTAATTCGAAGCTTTCTATAATTCAAAGCAAAGTTTTAGTC
CCTTGAAGATCGAATTAGAGAGGTTCAATTGTACAGTTGACGCTCTCTAA
TTCGATCTTCAAGGGGAATTGGATTTTCATCGAATAAGGGAGCTTATCGA
ATAAGGGAGCGTCGTTTATGAGAGTTTCATGTTGACGGGGACTTTAAATT
TCATCGAATGAGGGAGCTTATCGAATAAGGGAGCGTCGTTTATGAGAGTT
TCATGTTGACGGGGACTTTAAATTTCATCGAATAAGGGAGCCTATCGAAT
AGTAGAACGTCGAATTAGAGAGGTTCAATTGTATTTTTTTCTTTCAATTT
CTTACAGGCGAATACGAGACAAATACGAAACAGAAATCAAAGAGCTTGAA
CATTCAGAACGCCACATACAAGAAAAATGTAAATCACTCAAAGAACGAGT
CGAGGAATTGGAAAACGATTGTATTCGATTGAAAAGCGAACGGAAATCGA
AAGATCAAGAATTAATCGATAATCAGAAATTAACGAGTCGTTTACAAGAG
GAACGAGGCAAAGTTACCGATATCATTCGACAAGAATTCGCTGATAGGTA
CGATATGACGATTAAGCTACATTAAGTAGATCAATTTACGCGATGATTAT
ATTTCGCGAGTTTCGCGAGTTTTTCCGAAAATTCACGAAATTCAATGATC
ACGAGAATTTTAAAAGCAGGAATTTTGCCAAAAGCGTTAGAATGTTTGCT
AAAACCTCTAGAAAAATGAAAGATATTAGTTGAAAAAGGGACCGATTCGT
AAAATAAATCCCGTGTAAATTAAATTATTTTTGAAAAAAAGTTGTATCAC
GAAAATATCTGCTCGCGAAAATTTATCCACTGAAGGATTGCATATATGGA
ATGTATTAAGGACAGAACGCCACAGTTAAGGATTATCATCAATCAAATAA
AACAATTTTCATTGTTCTACAGGCTTGTGATATTAGAAGAAGAATCGAAG
CGGTTACGAAGTGAGTTAAGTGAAGAAAAAGCACGCCATAAATTCGACGT
CGAAAAAGTCACCAATGCTAAAGAAGAAGAGTTAGAAGAAGTACATAAAA
GGTATAATAATAGAGGTCTGGGGTCTGGTACTGACTTTTCTGAAGATGGT
GGTCAGATCTCGACAAAATTTGCTACATTTAGTATATTCAATTACATAAG
ATCACTTTTATTTTGAACTGAATGTGCTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTTAAAATTTTCC
TTTTTGTTAGTATTGGTTCTTATTTTACGTGTTCATTTGTTAAAGTTTCT
TTTTTGTTGTTGAAATTGATATCAGTTAAAAGAAATTATGTTTTCAAATA
GAAAGCGTGTATCTTCCCAGTGGAACTTTTTCCCAAAGCGGGATAAAATG
TTTTATTGAAATCCCAATGTGGATGGAAATTCTATTGTTCCAAGGCTAAA
AAACCAGTAGTGGGGATGGTTTTGTAGTGCATTTGTTGTAGTTTAGTCTT
TTACCTGTGGGCTTAAATTCTAGGGTATTTTCCTACCGGGACGAATTTTT
TGCCTAATTTTCCAGTGGAGCTGTGGTCCCGCGGGTCTGTGACTCTGGGT
GTTTTAATGATTTCTAATAACTTTAATGATTGACTTATTTCCCACACACA
GAGTAAAGAAAGCGATCATGAAAAAAGAAGAAACGACGCAATTACTGAGG
GATCAAATGATGGTAAGAATTCAAAAGATATTACTATAAGTCCCAAGGCC
GCTCTCAGCTAGAACGATCAAGAATTGATCAAATAAAAGTTTCAAGAATT
CGTATGCAAAAGTTTCAAAATACAGGGTGTCCGGAAAAAAAGTATCGAGC
TCGAACATGATTCTGAGTAGAAGGTTGTTGCGTGTGTTTAACAAAATGTA
AGAAAATATATACCAACTCAATAATTGTTTTTACAACAGTTATTGAGAAT
TGTTTTTTGTAAAAGTTATTCATAAAAGATGTCTCGTGACAATTAGTATG
ACACAGAGAGAAACTTTGAAATACATTGCAAATTTAGTGAAACACACACA
AGAACTTTCTTTATAGAAGTGGTACGACTTGATACTTTTTTCCGGACACC
CTGTAAAATGCAGATCACACTGCATCTTCCCATTCTTATTCTATTTTGTC
AAACCTAATTTTTTCACTTCAAAGTCTAACCAAATATTTTTCACTTTTCC
CAATTCCTTTTTAGGCTGCGGAAAAAAGGGCTGAACACTTGGAACAATTA
TTAGCGGAACAGCGGAAAAAGATTCTGGGTAAATAAAGAATCACTCATTC
CGTCGTGAGCTTTTTCCTCCTGGTAAGCTCTGGCTTTGGCTCGTCAGATT
CGACTAATCTTTTCTCAGGTTTTTTATTCAAACTATCCCGTTTCATTGTC
ACTTATTTATATTTTTTACTTCTTTTTTTGATTGCAAGCCTTTTTTTATT
AAAGACAATCCAGTTTGAAAGCGAGGTTATTCCTAACTTAGTCATTCCTT
GTATTTCTTTTCCAATTCTTCGACCTACTTCATTTCTTTTTGTACACTTA
TTGCCATCTCTATCTTCCCTCAATAATGTTTGTTGGGGTATAAACGAGTG
ACCAGACTTCAGTTATTTTCAGCCGTTTTTACTGAGCAGTTCGACTCTGT
TACGTACCGTAAGTTGGTCTAATGTCGACGTCCCTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011448XLOC_011448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020386-exon-sc0000355-1575043694:287499..287733TCONS_00020386-exon-sc0000355-1575043694:287499..287733Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:284028..284260TCONS_00020386-exon-sc0000355-1575043694:284028..284260Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:283027..283213TCONS_00020386-exon-sc0000355-1575043694:283027..283213Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:280762..280889TCONS_00020386-exon-sc0000355-1575043694:280762..280889Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:277935..278160TCONS_00020386-exon-sc0000355-1575043694:277935..278160Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:277261..277484TCONS_00020386-exon-sc0000355-1575043694:277261..277484Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:276287..276526TCONS_00020386-exon-sc0000355-1575043694:276287..276526Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:275783..275911TCONS_00020386-exon-sc0000355-1575043694:275783..275911Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:274922..274982TCONS_00020386-exon-sc0000355-1575043694:274922..274982Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1575043694:273946..274419TCONS_00020386-exon-sc0000355-1575043694:273946..274419Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:287499..287733TCONS_00020386-exon-sc0000355-1510915933:287499..287733Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:284028..284260TCONS_00020386-exon-sc0000355-1510915933:284028..284260Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:283027..283213TCONS_00020386-exon-sc0000355-1510915933:283027..283213Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:280762..280889TCONS_00020386-exon-sc0000355-1510915933:280762..280889Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:277935..278160TCONS_00020386-exon-sc0000355-1510915933:277935..278160Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:277261..277484TCONS_00020386-exon-sc0000355-1510915933:277261..277484Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:276287..276526TCONS_00020386-exon-sc0000355-1510915933:276287..276526Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:275783..275911TCONS_00020386-exon-sc0000355-1510915933:275783..275911Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:274922..274982TCONS_00020386-exon-sc0000355-1510915933:274922..274982Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1510915933:273946..274419TCONS_00020386-exon-sc0000355-1510915933:273946..274419Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:287499..287733TCONS_00020386-exon-sc0000355-1491911889:287499..287733Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:284028..284260TCONS_00020386-exon-sc0000355-1491911889:284028..284260Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:283027..283213TCONS_00020386-exon-sc0000355-1491911889:283027..283213Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:280762..280889TCONS_00020386-exon-sc0000355-1491911889:280762..280889Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:277935..278160TCONS_00020386-exon-sc0000355-1491911889:277935..278160Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:277261..277484TCONS_00020386-exon-sc0000355-1491911889:277261..277484Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:276287..276526TCONS_00020386-exon-sc0000355-1491911889:276287..276526Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:275783..275911TCONS_00020386-exon-sc0000355-1491911889:275783..275911Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:274922..274982TCONS_00020386-exon-sc0000355-1491911889:274922..274982Clytia hemisphaericaexon
TCONS_00020386-exon-sc0000355-1491911889:273946..274419TCONS_00020386-exon-sc0000355-1491911889:273946..274419Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000355supercontigsc0000355:273946..287733 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.858544	0.410912	0.538459	0.727108	1.33443	0.269875	1.19454	0.12734	0.0112327	0	1.00021	0	0.306511	0.301343	1.29486e-08	0	32.0642	3.79386	4.02225e-07	0	32.2561	31.9935	18.6287	20.3255	18.2144	21.3742	0.209297	0.361747	1.19398	1.15969
Blast
[Close]
BLAST of TCONS_00020386 vs. Swiss-Prot (Human)
Match: CP131 (Centrosomal protein of 131 kDa OS=Homo sapiens GN=CEP131 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 2.498e-78
Identity = 235/509 (46.17%), Postives = 345/509 (67.78%), Query Frame = 2 
Query:  221 MSRIKNQQKDFTTMQLKEMDKEHKKQLHIQRDDYEGTIKRHLSFIDQLIDDKKVLTKRCEELVSKLKDIDQKYTAKIKQITDSHTIEMKKQKEIMEAAXXXXXXXXXXXXTHEIKEITVKGLEPDIQXXXXXXXXXXXXXXXXXQGEILEADERVGRKYIQQLDELRMQLEKEKEMAVRKERDIAXXXXXXXXXXXXXXXXXXXXXXLKEVEDEKERLAEQTQRMKSDFDEKKSAYEITLRQTLTHASTDHDKQLNHLRDK--------HLSEMQTLKEQLDIERQQWIENYMKKQETVLLAKERELKEGVRESRDKEIEMVIXXXXXXXXXXXXXXXXXXXNRTKRIRDKYETEIKELEHSERHIQEKCKSLKERVEELENDCIRLKSERKSKDQELIDNQKLTSRLQEERGKVTDIIRQEFADRLVIXXXXXXXXXXXXXXXXARHKFDVEKVTNAKEEELEEVHKRVKKAIMKKEETTQLLRDQMMAAEKRAEHLEQLLAEQRKKI 1723
            + R   QQ+D T  ++KE +K   +QL  QR+ YE TI+RHL+FIDQLI+DKKVL+++CE +V++LK  DQ+ T ++ Q    H +E+KK KE+M A EK RREKWI EKT +IKE+TV+GLEP+IQKLIA+HK E++++K++ + E+L++DER  ++ ++Q +ELR QLE+EKE   ++ER+ ARQRF+  L +E+ + QQQR+RL  EV +E+ERL +Q  R +++ +E        LRQ L  +S+   + L    +K        H  E+ TLK+QL++ERQ W     +K+E  LL +E+EL+E +R+ RDKEIE+VI RLE + A A+EESE+A+E+R KR+RDKYE E+ ELE SER +QE+C  LK ++ E E + +RL+   + K++ L D Q +  +L  ER  +  +IRQEF DRL   EEE+++ ++EL+  +AR +            ELEEVH+RVK A+ +KEE    LR Q  AA KRA+HLE+LL + R+  
Sbjct:  590 LQRALAQQRDLTARRVKETEKALSRQLQRQREHYEATIQRHLAFIDQLIEDKKVLSEKCEAVVAELKQEDQRCTERVAQAQAQHELEIKKLKELMSATEKARREKWISEKTKKIKEVTVRGLEPEIQKLIARHKQEVRRLKSLHEAELLQSDERASQRCLRQAEELREQLEREKEALGQQERERARQRFQQHLEQEQWALQQQRQRLYSEVAEERERLGQQAARQRAELEE--------LRQQLEESSSALTRALRAEFEKGREEQERRHQMELNTLKQQLELERQAWEAGRTRKEEAWLLNREQELREEIRKGRDKEIELVIHRLEADMALAKEESEKAAESRIKRLRDKYEAELSELEQSERKLQERCSELKGQLGEAEGENLRLQGLVRQKERALEDAQAVNEQLSSERSNLAQVIRQEFEDRLAASEEETRQAKAELATLQARQQL-----------ELEEVHRRVKTALARKEEAVSSLRTQHEAAVKRADHLEELLEQHRRPT 1079
The following BLAST results are available for this feature:
BLAST of TCONS_00020386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP1312.498e-7846.17Centrosomal protein of 131 kDa OS=Homo sapiens GN=... [more]
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