TCONS_00017633 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017633
Unique NameTCONS_00017633
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017633 ID=TCONS_00017633|Name=TCONS_00017633|organism=Clytia hemisphaerica|type=transcript|length=2106bp
ccaAGTGGTTTTAAGTGAAATGGTGATGAAGCGTCTCCGAAACAGCTTTG
GAAATTAAgcaatgaaatcaaaataaaacaaaactttaTCCTCTCCATTT
TGGAGTTTCTTCAAAGAGTGGTGTCTTCTGTAGTGCCTAGTGCAAGATGG
AAGTAGTTCCTTTTCGTCGAGGTTCCttctcatttttttgcaaaaaaact
tCCTTCTTGtcaaaaaacgaaagtgaaagtaaagatTTCTGCTACGTCAG
CGCCTAATCCGCATAaatttctgctgattcagcagaTTATCATAAACAga
actaaaaatggtagacgaGCTGTGATTGcacatttgaaaaatcaaaatcg
aacaCATTTCGcggttatttttcttttttggcatACAAATTCAAACTTAT
TGATATTAATCATGGTTGGGAGCTCATCTGAAGAATCGGCAAAGCTTACA
GCTGAGGAAGCTGCTGTTTATGATCGCCAAATTCGTCTTTGGGGAGTGGA
AGCACAGCAAagACTAAGAAAAGCAAGGATCCTACTGGTAGGCATGTCCA
GTCTTGGTAATGAGGTTTGCAAGAACATTCTTCTGGCAGGCATCAAACAT
TTGACCATACTGGATGATAAAACGCTCacagaaaaagattttgaacaaCA
GTTTTTCTCAGGTCAAGAAGATGTTGGAAAAAATAGAGCCGAAGCAAGCT
TAGCACGTTCAAATGATTTAAACCCCATGGTCGATATAGTGGCAGACCGA
GAGAATgttaaagagaaaaatgaagagTTTTACAAGAATTTTGATGTTGT
TTGCATCTGTGATTGCCCAGTAGAAACCCAGATCAAAGTGAATGAAATTT
GTCATCGTTTGGGAATCAAGTTTCTATGTGGACAAGTTTATGGTTACTAT
GGTTACATGTTTCAAGATCTAGGTTGTCATAAATACATGGAAGAAGTAGT
GAAAAAAGCAGAAATCAAGAAGAACGCTGAAGATCACGATGGGCCTTCAg
agcaaaagaaaaagaaaatggagCAAACTGAAACAGAGTACGAAGAAAAG
cTCTCCGAATTTTGTACACTCGGTGAAGCATTGAAAGTATCGGTGtttga
aaacatcaaaagcGAAAGACAAGCGAAACAAGTCTCCAAAACTTATCTCG
TTATGAAAGTTTTGATGGAGTACGAAAAACAATTTGGTGAACTTCCACAA
AACATGGAGAGCAACTCGAAACTACAACAATTACTCGATGTACGATCAGA
GGTCTTTGATCAAATGAACATTGACGGAGAATTTCTACCGGACGATTTTG
CAAGTTTTTGCGTTGGGCAACTGTTTCCCGTGTGTCCAATTGTTGGAGGT
GTCATGTCACAAGAAATCATCAAAGCTGTCTCAGGGAAAGATGCTCCTCA
CAACAATTTCTTCTTCTACGATGGTGTTTCCACGAGTGGTGtcgtgcaaa
aaatcaccaATATATCGAATGTCAAGCCTACGGAAccgacaaaagaacaa
aaaaataactTAATATCGACGAGCAATAAAGCACCGGTAGAAGAGATTAT
ACTGTGACAAGACTAATCTCGATTTTTGTTCAGTAACTTCGAACcatctt
ttgaagacctctcgTCATTGAATCCATTTGACATCGCGATAGATCGACGA
AGATATTCTTTGAACCGTTTTTAAACACCTGTACATTACACTAGATTACA
ATTTGGAAAGGTTGGACAAAAAGCGAAACGGACCGTACCGTAttacctat
aacaatccaaaagtccCTCAACAATTAAAAgcgccaaaatcgcaaaaatt
cggATAGTACTGCGGTATAGGCGATTTTAGGGCTTTTGATTGTCAAGGGA
ACTTTTGAATTGTTATAGGTGAGTACGGTAAAAGTTGATTCGTTGAAATG
AGTGAGTCACAGAGATGTTTGTTTTATTATAATAACAGTTTCACAGACAG
TTGATATGGAATGACTTGCGTAAAAAGGATTTGAAAACAActttattttt
tgttacatAATTTTAGATGTTGCACTGTTGAGATTTTTGTGAGTTATGAA
AAAAGCTGGAGTTTGACCTTAACTTTGAATTTATTTCACTCAAAATGAGA
TTCTNN
Run BLAST on NCBI

transcript from alignment at sc0000271:129542..136885-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017633 ID=TCONS_00017633|Name=TCONS_00017633|organism=Clytia hemisphaerica|type=transcript|length=7344bp|location=Sequence derived from alignment at sc0000271:129542..136885- (Clytia hemisphaerica)
CCAAGTGGTTTTAAGTGAAATGGTGATGAAGCGTCTCCGAAACAGCTTTG GAAATTAAGCAATGAAATCAAAATAAAACAAAACTTTATCCTCTCCATTT TGGAGTTTCTTCAAAGAGTGGTGTCTTCTGTAGTGCCTAGTGCAAGATGG AAGTAGTTCCTTTTCGTCGAGGTTCCTTCTCATTTTTTTGCAAAAAAACT TCCTTCTTGTCAAAAAACGAAAGTGAAAGTAAAGATTTCTGCTACGTCAG CGCCTAATCCGCATAAATTTCTGCTGATTCAGCAGATTATCATAAACAGA ACTAAAAATGGTAGACGAGCTGTGATTGCACATTTGAAAAATCAAAATCG AACACATTTCGCGGTTATTTTTCTTTTTTGGCATACAAATTCAAACTTAT TGATATTAATCATGGTTGGGAGCTCATCTGAAGAATCGGCAAAGCTTACA GCTGAGGAAGCTGCTGTTTATGATCGCCAAATTCGTCTTTGGGGAGTGGA AGCACAGCAAAGGTATGACTTTTTTTTTAATACTGTACGTACGTACCGTG TGAAGAAGATAGGAGGGTAACTTGCATCAGTGCACAGTGGACAGTGCTGC AAATAACGGCCGGTGACCGGTAAATACCGGTCATTTTGAAGTTTCTACCG ATCATTCTGAAGCTCAGTTTTTCATTTTGTCCGGTTAAAATTTTAGATTA GAGGCTTCTTAATAGCGCTTCTTAACTAATTAAAAGAGGAGCAGTTTTTA AATCAAAATAAGTGTTTAGCCAATCTAAAGGTCATTACAGACTACAAAAT TTTCTAAGATGGTTCCGCCAGACCCCCTGCTCGTTACACTCGAAAGATTA CCGGCCAACNACAGACTACAAAATTTTCTAAGATGGTTCCGCCAGACCCC CTGCTCGTTACACTCGAAAGATTACCGGGCGGCCAACTGAAATTTCCCTA TTTGCAGCACTGGTGGAGGCTAACATGCATAGTCAATAGTCCTCTCTAAG AATGAATGACCTGGCTGATCATTAAAATACAAAGTTAAATCAAAACAAAA ATGGTAGATTAGAGCTGTATGCAGAGCTGAGTATAGGTATTGTTAATTTG TTTTAGTCTCAGCAAGTACATGAGACCCTGCTGCTGGCGCACCGCGGTCT ATCCGGTGTTTTTGTTCGGTGTCAAAAAGTATCCTTTGTGCTTTGATTAA AGACATAATTATTAATTTTGTCTGGTATCCAATATCGCCCACTCGGGCAT CAGATTTCATTCAAAGAGTCTGCGTCGGCTTGAGCGGATTACAAAGTATT AAAATGTCCGCTGTTATCGTGCTCTGCAGTAATTCGATAATTGAATCAAG GTAATTATTGACGGTACTTGCCCTTACTCTTTAAACTGTTTTTGTACCTT GTTTTGATTGTCCGGTGAACCCTTATTTAACACGCGCGATTTCAATTTAC AGTGCGCTGACAGGGTCTTTGTTTGGTTTCCAGAAGTTTGAAAAATTAAC ACCGGAGCTAACACCGAACAAAAGGTTTCCGGTGTGGCTGAGGGATACTT CTTCGCACCGGACACACAAGGACTTCTGGTGTGCCGGCAGGGTTGTGGCC GTGTACAAACAGGATAAATTACCTTGTCCCTAGGTAACAGATGTGTTGTA AAAGACTAATGAAAAGATGCCGTTATCATTAACAAAATTTCTCCTGGAGT ATATAATATAATTAGTTATTCTCATGTTCTCCCAAATGACTATTAGAAAG TGGCAGTCTTTAGAATAACTAATTACTCCAGCAATAAAATATGGGTTAAA ACAAACAAATAATTTTATAACATATTGTAGACTAAGAAAAGCAAGGATCC TACTGGTAGGCATGTCCAGTCTTGGTAATGAGGTTTGCAAGAACATTCTT CTGGCAGGCATCAAACATTTGACCATACTGGATGATAAAACGCTCACAGA AAAAGATTTTGAACAACAGTTTTTCTCAGGTCAAGAAGATGTTGGAAAAA ATGTAAGATACATTCTTAAATGAGATGGAGAGAAGTCTGACCCCCCTTCT TAAAATGGTCCTCCAACCTTCAAAAATGTCTATCCCAAGGTATTTGGGCT AAATTTTAGATAATTTATTGTGTATATATAGTCTAATCGAATGATCCCCC TAGTCCCCCCTTCACACCTTTTTCAATCTCATTTGAATTTCCTTGTTTCC CTACTAAGTTGTTGATTGGGAAGAGTTTCTTGTTTGCAAATAATTGCTGA AAACTTTCTTTTTCCTTCAGAGAGCCGAAGCAAGCTTAGCACGTTCAAAT GATTTAAACCCCATGGTCGATATAGTGGCAGACCGAGAGAATGTTAAAGA GAAAAATGAAGAGTTTTACAAGAATTTTGATGTTGTTTGCATCTGTGATT GCCCAGTAGAAACCCAGGTAGGTATTTTGTTTGGCCTTTTATCAAGAGAT ATTTGTTGATAAAATTTTTGAGCTCGATTATACAAAGTTATGGTGGCACT AGAGTTCAATGAAGTTCTGTACATGGTTTCAGCCCACTTTTCAGGTGCCC CCATTGAGCATGGTGCCCCCCAGCAATTTAGGTCCCCTTGAAAAATTGCT TTGAGTTAGGTACCCCTATTCAGCAGATAATTTCTTTGAATTGACACTTT TTGTTCTTTTGTCATTCCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGGGGGGGGGG CTGATACCATGCTGTATATAGTTTTCCTAGCTATTTATTATTTAGCATTT AACGTATTTTCACTGATTGTCAACCCCTTTTCTGCCTGTCCCAGAGTTAC GAAGTAACATACAAAAGTAAGAAATACTGATTTAAGGATATTCTTTTTTA TATTATCTAGAAAGGAGGTGCCCGTCTATGTTGACAGAGCAGAATAAACA ATAGGATCTCCAGGGGGGGGCACGCAGTTACTACAAGACAGTATGACACT TACTACCGTGGTGGTACTGTATTCAGAAGTTATGAAAACAGTTACTACAC AGTGTAGTAACTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNAGAACTTTCAAAATTTTTCACAAA AAATGAATTTTTTTGTGAAAAAATTCTTTGTTAAAAAAAATATTTTTGTT ATAAATGGACAAAAAAATTTTTGAAATTTTTGAAATTTTTCTCAGACCCA ACTTTGAAATTATGCTTTCCCTAATTATCATTAAAATGTTCTCAACAGCT GTTAACCAAGTAAATTAAAAGAAAATCTAGCACAAAAATGGCTTTAGGTT AAAAAATAATCACAATTTAGGGTAATTTCGAGCATGTTTTTGATGATATC ACTCAAAAACAGGGGTGGTACCTGGAAATCTTTTCTGAAAACAGTTACTA CCAAGGTGTAGTAACTGCAAAGGGTGGTGGTCCTGAAAAAAAGTGTTGAT AAAGCACTTACTACACATCATGTCTTGTAGTAACTGCGTGCCCCCCCCTG GGATCTCTCAACATTTTGTTCTTGAGAGCGCTGAAGAGAGAGAAATTTGC TCTTCCTGTGTAAGCAAAATGGTAATAGGAGATACGTTAAATTACACCCT TTAAAATTATTTTTCCAATATTGTTTGGGTGTAATAGATCAAAGTGAATG AAATTTGTCATCGTTTGGGAATCAAGTTTCTATGTGGACAAGTTTATGGT TACTATGGTTACATGTTTCAAGATCTAGGTTGTCATAAATACATGGAGTA AGTTTGAAATGCTTTTAGTCTTCTTTGAAGACATCCTGAATTCACAAAGA ACTGATTTCAAACAGAGATCCCTAACTCTAAATGCATGTTTCTAAGGGTC AGAGCCAATATAATATATTTTGAGTCATAGATCCCTACTTTGGATATGTT TCTTGTTTTAACTACTGTGATATGACCGCTATAATGGTCCAAAGTAAAAG GTGACAGTTCTAGGACGCTTCTACAATACTCCCCTGTTTTTGAATTCTAG CGTTTTCTAATCTCTGGTGTTTGTTTCTAGAGAAGTAGTGAAAAAAGCAG AAATCAAGAAGAACGCTGAAGATCACGATGGGCCTTCAGAGCAAAAGAAA AAGAAAATGGAGCAAACTGAAACAGAGTACGAAGAAAAGGTTGAACATTC ATTATTTGGTGAATAATTTCCATTTTTCTTTCTTTCTTTTTGTTTTATTT AAAAAAACTTTATTCACGATTGGAGAAAAGACATATCCTGTTTCAGCCAT AATACAAGAGTATAACTGTTTTTAGAAATTCCGAAGTTTGTATGTTTTGT TAAGTAACATAATTTCCGCCATTATGGAATCAAACATTCGATTTACGTAA GGAATCGCCTCTACACATTCGAACATTGCTTCCATAATGGCGGAAATTAC GTACCTTAAACCAAACATGCAAACCTCTATATTTCTAAATTTTACAAAAC AGTTTTACTCTTTTATTACAGTATGGCTAAAGGCTAAAGCAGGATATATG CTTTTAAAAGAGAAGAATTTGAAGATTCGATTCGATTTTTTCTTAATGTC TTCACTTTTTTTCTTAATGTCTTCACTTTTTTTTTAGCTCTCCGAATTTT GTACACTCGGTGAAGCATTGAAAGTATCGGTGTTTGAAAACATCAAAAGC GAAAGACAAGCGAAACAAGTCTCCAAAACTTATCTCGTTATGAAAGGTAT GTTCATCTTTCAAGTAGAACTCAACAATTATGTCTTTGGATGAGATGAAA AGGCAGCAACAATGATGTGGGTTCCGCCATTTGAAATCTGCATTCTGTAG CTGGCCAGAAACACTATAAACCGGCTTGATGATACTTCATTTATTTGCTC ACGTGACTTATCGCCCAAATATTAGGGTGCAAAAAAATCGTAACATTAGC TCGAGACAAGTAGATTTTCTGTTATGACAAAGTTTCTGGTAGGACTTTTG AAAAGTTAAAATTTTTGATCAATATCTGCTCGTCTCCATATGAATCATGA GTCATTTTGCCTCCAAAAATTGAGCTCAATCGCCTGACTGTGTCAGTCTG CCTGTACACAATTAAGACATTGAGATCCCTCTATTGCACTTAAATGTTCT ACGTTTTCTCGTCTGATTGGGTCAAACCCTATTCAAAACTGGGAACTTTT TTAAAAATTCCGTTGAAAGTGTCGGGACAAGCTGGAATTTTTACAAGCTC TTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTTATTACTT TTTCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATTAGTGAAG TATCTTGTAAAAACTCCAAGGCATCTGAAAGTGTCACGACATTTGATTGA TTACTTTATTCAGTTTTGATGGAGTACGAAAAACAATTTGGTGAACTTCC ACAAAACATGGAGAGCAACTCGAAACTACAACAATTACTCGATGTACGAT CAGAGGTCTTTGATCAAATGAACATTGACGGAGAATTTCTACCGGACGAT TTTGCAAGGTATTATTTCGCTTTTTGTATTTTTGGTACTTGATAAAAAGA GCATTGAAGTCCAACGAAGTGGGCTGAAGTTCTCATGTTTGTTGTGTGAA ATGTAAGGACTTTTAAGAAAATTTAATATTTAATTTTTTACAAAAAAATT ATTTTCAAGTTCTTAGTTTTATCTATGACAGCTATAGTTCCGATTTCTTA AGTTTTCAGTTAGAAAAGTCCTTTCGATAATATGCTTTTTTCGATTGTTT CTTTTGGACTGTTCAATTATCTACCATTTCAGTTTTTGCGTTGGGCAACT GTTTCCCGTGTGTCCAATTGTTGGAGGTGTCATGTCACAAGAAATCATCA AAGTAAGATTATTTTAAATCAGTTCAAGGGTAACTGATCAACATCTTTTT TAGGGGGGAGTTAAATGGTCAATGTTTTACGTGTATGCTAGTAATTTAAG ACTTTTGACAGTATTTTGATCGTTTTCACAGGTCTTTGGTCAGGCGGCTA TATTGTTTCTAAACTGAACTGAACATTAGAAGGAGCAGGAATTCGAACCG CGAGTCCCTAATTAGTTATGCTAACGCCTTTGACCATTTGACCATCGGTC CTGTTTTGTGAGACGATTCGCAAAGCAACTCGTCATCCCGACCAATTCTA AATTATTTTTTAATTCCCTACCTACATTCCTGGTCAAACATTCTAAAATC ATTTATTTTCAGGCTGTCTCAGGGAAAGATGCTCCTCACAACAATTTCTT CTTCTACGATGGTGTTTCCACGAGTGGTGTCGTGCAAAAAATCACCAATA TATCGAATGTCAAGCCTACGGAACCGACAAAAGAACAAAAAAATAACTTA ATATCGACGAGCAATAAAGCACCGGTAGAAGAGATTATACTGTGACAAGA CTAATCTCGATTTTTGTTCAGTAACTTCGAACCATCTTTTGAAGACCTCT CGTCATTGAATCCATTTGACATCGCGATAGATCGACGAAGATATTCTTTG AACCGTTTTTAAACACCTGTACATTACACTAGATTACAATTTGGAAAGGT TGGACAAAAAGCGAAACGGACCGTACCGTATTACCTATAACAATCCAAAA GTCCCTCAACAATTAAAAGCGCCAAAATCGCAAAAATTCGGATAGTACTG CGGTATAGGCGATTTTAGGGCTTTTGATTGTCAAGGGAACTTTTGAATTG TTATAGGTGAGTACGGTAAAAGTTGATTCGTTGAAATGAGTGAGTCACAG AGATGTTTGTTTTATTATAATAACAGTTTCACAGACAGTTGATATGGAAT GACTTGCGTAAAAAGGATTTGAAAACAACTTTATTTTTTGTTACATAATT TTAGATGTTGCACTGTTGAGATTTTTGTGAGTTATGAAAAAAGCTGGAGT TTGACCTTAACTTTGAATTTATTTCACTCAAAATGAGATTCTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009852XLOC_009852Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017633-exon-sc0000271-1575043694:136374..136885TCONS_00017633-exon-sc0000271-1575043694:136374..136885Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:134884..135055TCONS_00017633-exon-sc0000271-1575043694:134884..135055Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:134469..134615TCONS_00017633-exon-sc0000271-1575043694:134469..134615Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:132739..132848TCONS_00017633-exon-sc0000271-1575043694:132739..132848Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:132347..132455TCONS_00017633-exon-sc0000271-1575043694:132347..132455Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:131790..131898TCONS_00017633-exon-sc0000271-1575043694:131790..131898Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:130978..131122TCONS_00017633-exon-sc0000271-1575043694:130978..131122Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:130634..130703TCONS_00017633-exon-sc0000271-1575043694:130634..130703Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1575043694:129542..130273TCONS_00017633-exon-sc0000271-1575043694:129542..130273Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:136374..136885TCONS_00017633-exon-sc0000271-1510915933:136374..136885Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:134884..135055TCONS_00017633-exon-sc0000271-1510915933:134884..135055Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:134469..134615TCONS_00017633-exon-sc0000271-1510915933:134469..134615Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:132739..132848TCONS_00017633-exon-sc0000271-1510915933:132739..132848Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:132347..132455TCONS_00017633-exon-sc0000271-1510915933:132347..132455Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:131790..131898TCONS_00017633-exon-sc0000271-1510915933:131790..131898Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:130978..131122TCONS_00017633-exon-sc0000271-1510915933:130978..131122Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:130634..130703TCONS_00017633-exon-sc0000271-1510915933:130634..130703Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1510915933:129542..130273TCONS_00017633-exon-sc0000271-1510915933:129542..130273Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:136374..136885TCONS_00017633-exon-sc0000271-1491911889:136374..136885Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:134884..135055TCONS_00017633-exon-sc0000271-1491911889:134884..135055Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:134469..134615TCONS_00017633-exon-sc0000271-1491911889:134469..134615Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:132739..132848TCONS_00017633-exon-sc0000271-1491911889:132739..132848Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:132347..132455TCONS_00017633-exon-sc0000271-1491911889:132347..132455Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:131790..131898TCONS_00017633-exon-sc0000271-1491911889:131790..131898Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:130978..131122TCONS_00017633-exon-sc0000271-1491911889:130978..131122Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:130634..130703TCONS_00017633-exon-sc0000271-1491911889:130634..130703Clytia hemisphaericaexon
TCONS_00017633-exon-sc0000271-1491911889:129542..130273TCONS_00017633-exon-sc0000271-1491911889:129542..130273Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:129542..136885 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.61288 9.66928 4.05205 5.12067 10.5092 5.33594 4.63227 5.39296 2.63182 4.79284 2.07947 3.54878 3.22705 2.2442 3.52757 3.19339 4.927 3.18144 1.76033 2.32113 2.72286 2.91646 4.21513 5.13624 6.35039 7.50391 1.8339 0.387101 2.20156 2.69603
Blast
BLAST of TCONS_00017633 vs. Swiss-Prot (Human)
Match: SAE1 (SUMO-activating enzyme subunit 1 OS=Homo sapiens GN=SAE1 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 2.043e-94
Identity = 145/340 (42.65%), Postives = 226/340 (66.47%), Query Frame = 1
Query:  430 EESAKLTAEEAAVYDRQIRLWGVEAQQRLRKARILLVGMSSLGNEVCKNILLAGIKHLTILDDKTLTEKDFEQQFFSGQEDVGKNRAEASLARSNDLNPMVDIVADRENVKEKNEEFYKNFDVVCICDCPVETQIKVNEICHRLGIKFLCGQVYGYYGYMFQDLGCHKYMEEVVKKAEIKKNAEDHDGPSXXXXXXXXXXXXXXXXXLSEFCTLGEALKVSVFENIKSERQAKQVSKTYLVMKVLMEYEKQFGELPQNMESNSKLQQLLDVRSEVFDQMNIDGEFLPDDFASFCVGQLFPVCPIVGGVMSQEIIKAVSGKDAPHNNFFFYDGVSTSGVVQ 1449
            E    ++ EEAA YDRQIRLWG+EAQ+RLR +R+LLVG+  LG E+ KN++LAG+K LT+LD + +T +D   QF      VG+NRAEASL R+ +LNPMVD+  D E++++K E F+  FD VC+  C  +  +KV++ICH+  IKF  G V+GY+GY F +LG H+++EE  K A++ +  E  DGP  ++ K      T  ++K+  FC + EAL+V  + + K++   K+ +  Y +++VL+++    G  P +       + LL +R++V D + I  + LP+DF  +C  ++ PVC +VGG+++QEI+KA+S +D PHNNFFF+DG+  +G+V+
Sbjct:    6 EAGGGISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGEHEFVEEKTKVAKVSQGVE--DGPDTKRAKLDSSETTMVKKKVV-FCPVKEALEVD-WSSEKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDTYEEDSELLLQIRNDVLDSLGISPDLLPEDFVRYCFSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNGIVE 341          
The following BLAST results are available for this feature:
BLAST of TCONS_00017633 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAE12.043e-9442.65SUMO-activating enzyme subunit 1 OS=Homo sapiens G... [more]
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