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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016985 ID=TCONS_00016985|Name=TCONS_00016985|organism=Clytia hemisphaerica|type=transcript|length=1522bp
CTTTAAAGCTCCCGGTTCTCGCAATTTTTAACCCCTTGCGTGAAAATAGA
TTTCTTTGAATATCCTTAACTAAGCTTTTTGTGTTGATACACCCGACAAA
TTCGTTAATAAATACGTTTAAGTTTACGCTGGCGCAAAAAAACAATGAGA
ttaaaaatcgtaaattttgcgattttcggACATCGTGAAAGTTTTTAATA
GCATAAGTATAAGGTAAGTCTAAGTAAAGGCTAAAACagagaaaacatga
aaatatccTTCAGCCCGAATCCATATTTTAGCTTGAATAGCTCGATGTGT
TTTTTGGGTTCAGAGTAAAATGAAGTTTTAAATTTCAGGTAAAACAGTAA
AAGAAAGGATTGAGTTTTTGTTTCAGCGTCCTACTCGAAACGTGCGTTTT
AAATGGATTGCTACGAATTAGTGGTAGATTATGTTGGAAATGAATCGAGC
TCCGTCATTTTAATTCCAATTTGATTGACATGTCTCTTTTTGTCATATTC
GTGGAATTTTCTAATAAAAAGTTAGctgaatgtgattttttcagcaTGAA
Ggatatcccagctggcacacaaagttgtttcaacgtttatctaatgttca
taacgtccgtATAGTATGTGATTCTTCCACTTTGGTGCATATCAcgtaat
tcactttttttaacatttcttCCTTAGACTGTACCAACTTTCAGCGcatt
cagaggtttaccgtgcgcgtaagacaattatgaccagctgttatcaggtt
aattTAAAGCGAATGGGCTTTAAACGTGTTGATTGGTACTTTATTCAAAT
AATTGcctaatctcataacagatcatccattttGCGCATACtacgctctg
ctctaaagggatatggTGAATGTGACGGATGCAATGTTTTTAGAGTGCGT
ATGTGTCATGTACATATCTAAAGTACCCCCAATTTCCACTAGGAATACTG
TTAAGTATTTCTCATAGGACTGCAAAATCTTAGCATATAGGCGAACCATA
CCGAAAGATAGAGAACACTTTATACATACATGAAAGGATGAATATATAGG
AATACCCGAACTCCAAGAAAAGCTAACTAGCTAACTATTATAAATTAATG
TTTAATTATATTATGTGCATTATGCATATTTATgaaaggaaaattgaaaa
tataagaTCAGGAAGACAGTGTATCGAGTGCGAAATGGTGCCAACTATAG
TTTGTATGGACCAAGCTTCTTGTTTGGTATAAAGTGGGGCTGGTGATTAT
TAGAGTGAGGGCGAAAAGATAGGCCAATCGAAATTCAAGTAGTTAATTAA
AAATTCAAAGCTTCGAGCTAGAAGCTTGATCTCGctcaatcaaaaattga
aagttgaaTACATTTTTTACTAAGGTAcatgtttatttttataagcatac
aaaaatccaaaagctggcacggaaatgcttagatcgagagatttacaaag
ctgaaaaatgcttagagggatgcttatatcctaagcaaaattttagagaa
atttcgaaaatccagcCAAAAA Run BLAST on NCBI transcript from alignment at sc0000255:125979..127500 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016985 ID=TCONS_00016985|Name=TCONS_00016985|organism=Clytia hemisphaerica|type=transcript|length=1522bp|location=Sequence derived from alignment at sc0000255:125979..127500 (Clytia hemisphaerica)
TTTTTGgctggattttcgaaatttctctaaaattttgcttaggatataag
catccctctaagcatttttcagctttgtaaatctctcgatctaagcattt
ccgtgccagcttttggatttttgtatgcttataaaaataaacatgTACCT
TAGTAAAAAATGTAttcaactttcaatttttgattgagCGAGATCAAGCT
TCTAGCTCGAAGCTTTGAATTTTTAATTAACTACTTGAATTTCGATTGGC
CTATCTTTTCGCCCTCACTCTAATAATCACCAGCCCCACTTTATACCAAA
CAAGAAGCTTGGTCCATACAAACTATAGTTGGCACCATTTCGCACTCGAT
ACACTGTCTTCCTGAtcttatattttcaattttcctttcATAAATATGCA
TAATGCACATAATATAATTAAACATTAATTTATAATAGTTAGCTAGTTAG
CTTTTCTTGGAGTTCGGGTATTCCTATATATTCATCCTTTCATGTATGTA
TAAAGTGTTCTCTATCTTTCGGTATGGTTCGCCTATATGCTAAGATTTTG
CAGTCCTATGAGAAATACTTAACAGTATTCCTAGTGGAAATTGGGGGTAC
TTTAGATATGTACATGACACATACGCACTCTAAAAACATTGCATCCGTCA
CATTCAccatatccctttagagcagagcgtaGTATGCGCaaaatggatga
tctgttatgagattaggCAATTATTTGAATAAAGTACCAATCAACACGTT
TAAAGCCCATTCGCTTTAaattaacctgataacagctggtcataattgtc
ttacgcgcacggtaaacctctgaatgCGCTGAAAGTTGGTACAGTCTAAG
GaagaaatgttaaaaaaagtgaattacgTGATATGCACCAAAGTGGAAGA
ATCACATACTATacggacgttatgaacattagataaacgttgaaacaact
ttgtgtgccagctgggatatcCTTCAtgctgaaaaaatcacattcagCTA
ACTTTTTATTAGAAAATTCCACGAATATGACAAAAAGAGACATGTCAATC
AAATTGGAATTAAAATGACGGAGCTCGATTCATTTCCAACATAATCTACC
ACTAATTCGTAGCAATCCATTTAAAACGCACGTTTCGAGTAGGACGCTGA
AACAAAAACTCAATCCTTTCTTTTACTGTTTTACCTGAAATTTAAAACTT
CATTTTACTCTGAACCCAAAAAACACATCGAGCTATTCAAGCTAAAATAT
GGATTCGGGCTGAAggatattttcatgttttctctGTTTTAGCCTTTACT
TAGACTTACCTTATACTTATGCTATTAAAAACTTTCACGATGTccgaaaa
tcgcaaaatttacgatttttaaTCTCATTGTTTTTTTGCGCCAGCGTAAA
CTTAAACGTATTTATTAACGAATTTGTCGGGTGTATCAACACAAAAAGCT
TAGTTAAGGATATTCAAAGAAATCTATTTTCACGCAAGGGGTTAAAAATT
GCGAGAACCGGGAGCTTTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016985-exon-sc0000255-1491911889:125979..127500 | TCONS_00016985-exon-sc0000255-1491911889:125979..127500 | Clytia hemisphaerica | exon |
| TCONS_00016985-exon-sc0000255-1510915933:125979..127500 | TCONS_00016985-exon-sc0000255-1510915933:125979..127500 | Clytia hemisphaerica | exon |
| TCONS_00016985-exon-sc0000255-1575043694:125979..127500 | TCONS_00016985-exon-sc0000255-1575043694:125979..127500 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255 | supercontig | sc0000255:125979..127500 . |
Blast
The following BLAST results are available for this feature:
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