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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016857 ID=TCONS_00016857|Name=TCONS_00016857|organism=Clytia hemisphaerica|type=transcript|length=745bp
TGAGTGATAAAGAAAAACAGTGCCATATAAACACCAGGAATGTTCACATA
AGTCACGTGCCAAGCACCAATGTTGAAATCGACCGTCGTAAACATGAAAT
TAACTCCAGGTCCAACAATGAAACCAAGTGCAAATGCCATTCCCATCGAA
GAGAATTTACTGAGGACTTCTGAATCTGGATAACATCTTGCAATTTCTCC
AGAAATCACCGACCTGAGTGGCCCATCAGCACCAGACACCAATCGGCCGA
AAACCAAGAACCAAGGCGAGAAATGGAAAGCATACATTATGTTACCGATG
ATAACTAAGGTGTTGCAGATTAGGAAGATTTGACGTACTTTACGCGTGCG
GTCGACCCACCGTCCAATGAAGACTGATAAGATAACAGCTGCAATCAGGT
ACGAGGAAGCTACTAGACTGTAGAATAGCTTTGGTTGATCTGTGTTGATC
ATTTCTTTGATGTACAGCCAGAGTGTTAGAAATGTCACCGAATATTCCAT
ACCTAGCATGATACACTCCAAGGTGAAAGCTTTGGTTGTCCAATAACGTT
TGCGTTCCCATTGTTTGATGTCTACAGGCCCGTCACTCACTGCTTCTTTA
TCTAggtttttgtacattttgttggTAAGATTAAAGCTACGTATCTAGTA
TTCAATATCTAGTATCgagtttcaaattttaaatggaGAATTTCCAGCTA
CAGAGATTTCATGTCATaaatttcaatgtttcaaaTGAAAGCACA Run BLAST on NCBI transcript from alignment at sc0000253:190264..191400+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016857 ID=TCONS_00016857|Name=TCONS_00016857|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at sc0000253:190264..191400+ (Clytia hemisphaerica)
TGAGTGATAAAGAAAAACAGTGCCATATAAACACCAGGAATGTTCACATA
AGTCACGTGCCAAGCACCAATGTTGAAATCGACCGTCGTAAACATGAAAT
TAACTCCAGGTCCAACAATGAAACCAAGTGCAAATGCCATTCCCATCGAA
GAGAATTTACTGAGGACTTCTGAATCTGGATAACATCTTGCAATTTCTCC
AGAAATCACCGACCTGAGTGGCCCATCAGCACCAGACACCAATCGGCCGA
AAACCAAGAACCAAGGCGAGAAATGGAAAGCATACATTATGTTACCGATG
ATAACTAAGGTGTTGCAGATTAGGAAGATTTGACGTACTTTACGCGTGCG
GTCGACCCACCGTCCAATGAAGACTGATAAGATAACAGCTGCAATCAGGT
ACGAGGAAGCTACTAGACTGTAGAATAGCTTTGGTTGATCTGTGTTGATC
ATTTCTTTGATGTACAGCCAGAGTGTTAGAAATGTCACCGAATATTCCAT
ACctacaaaaaagaagaattgacttgttcaaaaattgttcggGATTGTTA
ACCcggaggggggtactagggttgcgagctgcgGGGGGGGGGTGTcaccg
actttcgacccttggaCCCATACctggactaaaaaggagaaaacaaagaa
aaatcttgTGAGTTTTGCAATCCTTACTGGGACAAATTtcaccaattttg
accaaatttcgatctttctgggggtaaaaagttgaaattttcctattttt
ccgactgttagcgggactgaaatttgattttcagatttttccaaccctta
gcgggactttggaaatcgaAAAAAGGGTTGATATCAAAGTaaggaaaaac
aaagaaactggATTCGAATCAGTATTCTATGATTCAAAACATACCTAGCA
TGATACACTCCAAGGTGAAAGCTTTGGTTGTCCAATAACGTTTGCGTTCC
CATTGTTTGATGTCTACAGGCCCGTCACTCACTGCTTCTTTATCTAggtt
tttgtacattttgttggTAAGATTAAAGCTACGTATCTAGTATTCAATAT
CTAGTATCgagtttcaaattttaaatggaGAATTTCCAGCTACAGAGATT
TCATGTCATaaatttcaatgtttcaaaTGAAAGCACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016857-exon-sc0000253-1491911889:190264..190761 | TCONS_00016857-exon-sc0000253-1491911889:190264..190761 | Clytia hemisphaerica | exon |
| TCONS_00016857-exon-sc0000253-1510915933:190264..190761 | TCONS_00016857-exon-sc0000253-1510915933:190264..190761 | Clytia hemisphaerica | exon |
| TCONS_00016857-exon-sc0000253-1575043694:190264..190761 | TCONS_00016857-exon-sc0000253-1575043694:190264..190761 | Clytia hemisphaerica | exon |
| TCONS_00016857-exon-sc0000253-1491911889:191154..191400 | TCONS_00016857-exon-sc0000253-1491911889:191154..191400 | Clytia hemisphaerica | exon |
| TCONS_00016857-exon-sc0000253-1510915933:191154..191400 | TCONS_00016857-exon-sc0000253-1510915933:191154..191400 | Clytia hemisphaerica | exon |
| TCONS_00016857-exon-sc0000253-1575043694:191154..191400 | TCONS_00016857-exon-sc0000253-1575043694:191154..191400 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253 | supercontig | sc0000253:190264..191400 + |
Blast
The following BLAST results are available for this feature:
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