|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:26780..32331+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023762 ID=XLOC_023762|Name=XLOC_023762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5552bp|location=Sequence derived from alignment at sc0000252_pilon:26780..32331+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGATGAGGATGATCCTTATGAATGTGTTGCATCAGGTGGTCTCCG
ATTGAAAGGTGGTAAAGTTAAAAAGTactaagaaattttttatttattgt
tcaCATGATTACCGTAGCTCCGTGTAATGTACACTTTGTGTAATGccgac
ataccttgtctaattccctcacagcaactatctggtctgaAAAATAGATA
CGAGTAGTTaggttatttttttaaacagcttaTTCAGGAGGTTTTacatt
ttaaagaccagaaAGTTGATATGAcagaattagacaaggtatgtcggCAT
TACACAAAGTTATGGTACATAAGTTTTGCACTTATAAAGCATACTAAGGC
ACAGATATGGCAAATATTAAAGCCTATGCTAGGCATTATTACCTGCTAAG
CCtacattttccgattttttggttGGGATTTAACAGATTTACAGAACTTT
TTGCATTAATCTTTCGATCTAAGCATCTCCTGAGCCAGTTTTTGTGGATT
TTGTATGCAGCTTATAAAAATATATGTAATAATTAGTTCAATCTAAAAAT
CAGTGCCTTACAAAATCTACAGTTATACTACACCCCtgcctctgtgaccc
agtgggGTCTTTCGATCTAAGCATCTCCTGAGCCAGTTTTTATGGATTTT
GTATGCAGCTTATAAAAATATATGTAATAATTAGTTCAATCTAAAAATCA
GTGCCTTACAAAATCTACAGTTATACTACACCCCtgcctctgtgacccag
tgggatccaccccactggccaccccagtgaatttttggacctacctttgg
aggtcctataaattaacccgtgttcgttcgttcgttcgtccgttcgttac
tagcttttctcgggattggctcattagtttttcctaatttttggcacaaa
gatgcaaaatggtaatgcccaaaatgtgacggagctcgattttcgaaaaa
aattcatttccggccgaaaatgccggaaatatgaaatatgccggaaaaac
cgttttttttggcattttcttgagatttcatcattagtttttttttattt
tttgcacaaagatgcgtattaggaatgcctaaaacatggattagtccgat
ttttgagaaaaattctattccggctgaaaatgccggaaatatcccggaaa
tcgccgtttttgcagattttcattggactttttccttatatttcgttgtt
tttcacacaaaaacattatttgtagcaatgcccaccatcaagcatggttt
aattgtcaataaaagtgatttttgaagccggaactttctaaaattcgccg
gaacagcctattgtcgccggaaaaacggtatttcttgaatttctcgagct
gtactttatattttttcatgaaattttgcacactgatgcaaaataacaat
acctaaaatatgacagagcatGATTTTCAATTGactacttttccggccga
aaatgccggaaatatgccggaaaaaccgtttttttggcattttctcgaga
tttcatcattagttttttctgatttttttgcacaaagatgcgtattaaca
atgtctaaaacatggcctagtccgatttttgagaaaaattctattccggc
tgaaaatgccggaaatatcccagaaatcgccgtttttgcagattttcatt
tttcattttttttaaaaattgccggaacagccgattttcgccggaaaaac
ggtatttcttgaaatttctcgagctgtactttatattttttcatgaaatt
ttgcacactgacgccaaaaatgccaataaagccagtttttttgacatttt
ctcaagatttcatcactagttttttctgattttttgcacaaagatgtgta
ttaaaaatgcccaaaacatggttgagtctgattttcgagaaaattttttt
tccggccgaaaatgccaaaaatagctgtttttccagattttcttTGGTCT
TaattgtgatatttttttcatgaaataattATTGCTGATAGTAATTCcca
atattttctaaaaatttccaaaacagCTGATTTTCGTgccagaaaaaaac
attttttcttcaatttctcaaGTTCTACTCAATATTtcattcatgatttt
ttgctcCATTCGTTCCTCGCTCTTTCATTCACTCCTTCCCTCATTAGTTC
TTTCGTTCGTTTGTTTGTTCGTTTGTGTTTCATGATCTTTTCCATTAATT
ACTATATTTGCTCTCATTTGTCTAACTTTCATTATCAGGTAATGTTACTT
TCATTATAGACACAAtactaattgaataaataataCATCATCAATCTGTA
GAATCGCCGTTGGTGCTGATCCTGTAAATGTGTGATGGTCGAGGTGATTG
TTTGGTCATAATTGTTTAGATGCTGTATAAGACAGATCCTGATTATAGTG
CAATGTGTGGATGCCGTGGAAGACAGATCCTGTTATTGATATTGTATTAA
CAGGAATGCTGTAACTGACAGATCCTGTTATTATTTAATATAGACTGTTG
ACATTTGTTCCTGTTGATATTGGTTCATCTTACTGTTTTATTCTGTTGAT
TGATTGTTGCTGCTGGTTCATTTGCATATATTGTGGATCACCTACCAGTG
TGCTGCATCAACATATCTTCCCTGTTGGAACATCTTCTGATTCAACACAA
GGTCAAGATCCTGTGATACTGGTGAGTCATCTTTCATATATTTCATAATT
AACAGGTAGGTCCTATCAGCATCCAGcttgtttttccaaaaatggctcat
ttttcagccccactggacaaATCACTCACCCCGCTGGAATGTTGTAGTAA
AAAACAccccattgaaaatgataaaaagtttacaCATACCCCACTCGAAA
AGCCCTTATTTTAACGTACCCCAGtagaatttttctttcaaaaaatcgcC
CCACTAGAATTTTCTCCTTCCCCTTCTTTAAAGGTGAAATAtccgaaaaa
agccaaaaaaaatttgctcgCCTCGCTCGCCATCAAATGTTCCACTTTAA
TATATTTACTGTATTTAACCCGACTTATATGGTCATTTTTGGAAAGTGCC
AAACGAgaggggttgaaaatctaaaatttctctgTCAGCACAAACCGGTT
GTACTTGgtcctttctttctttaaagctaGGTTCTAGCCTCAAAAGTTTT
CGAGAGGCTTTCTCACTTGCGTAGATACTGAAAGAAAGACCTCTGATTTA
ACCATGTTGACTAAACATTACTAGGTCCGGTCCCAGagtttataaaattt
gatataaccACACTGCTCCTCTATAGccccccttcccccAGACCTCATTA
CATTTCCTGTTACAGTACTGTAAGAGTAGATCCACCTGATCAAGATGATA
TTTCTACTTTAGTAGCATGTAAGAAGCAGATTTTGACCAGTACTAAACCA
AAagttagccagtaccttccaTCGTTAAAACACGATAGAATTAGGCGGTT
TTTGTCTAAAAAACAGGCTAACCAAAATTTAGctcatgcaaaaaattctt
tctcaccccagtgaatgtcaaggaaattttcgccaccccactcaatattt
gaaagaatatttttcatcCCAGTGAATTTCAGGTTTTTTCATTCTCACCC
CACTGGGTACTCAACACCCACtggggcacagagacaggggtgttatactG
TGacttatatttttgatattgaaatttGTCTCTTTTTGTACAGAGGGATA
ATCAATGTTTTCATATGATAAAAAGGTCAATCTCACAAACATTTCTATTT
CGCTATTTCTATGAATTAATCCAAAGGGTACATATTATGTACATTTTCCC
GGAtatactacacgcttttttcttttataagaatggtgtaaatccatttc
atcatggatattcttaacttttttgggaaaatcatcctaaaatattctta
cagcattctaaggttaggatcctaattagactagatttaacatttagtac
atacgtctgatgaataaaatggcatttttgtgaaagaagtgagccttact
tggggttgttgacaatttataattgaaaatgctctaaaaatggcattctt
agcttgagtagcaacattccatgatggtgatattcttagcatattcttaa
ttttttggccattttcatcatggacattcttataaagtgtattcttataa
aaaaaaacgtgtaatataagcaacgtaaaaaagaaaaaatattttcagaa
atttagcaagaaagttttcaaaaaatgaattttgcgAGAAGATAGAgact
aaaaatttcaaaacagaatAGAAGCGCAAGATTTTCAATTTACCAAAGAC
TCTTATTCTCATGaaattgaacctttagtcatgtaccgtaagttggcata
atgtcgacaccccccttctaatttcgacatcatTCTTTAGAGATAGAAAT
AATAGAAAGGTCGGAATCAGTGatggactcctcaactgattgatctgcaa
taaaaaaatagtttcaatcagcgattctgaccttcctattattcctatct
ctaaagaagggtggcgaaattagaagaggaatgtcgacattagaccaact
taaaaATTTTGTAAGTTAACATTTTGCTTTACTGTCATCCTGTAGTTTGC
CATTAAAAATCCTTTTATCAACACTCTTCGGTTTTATTATTAGTAGCCTA
TCCTTCAGCAGTCATCATAAAAGGTTGGGAGATTTTCTACAGATTGAGAA
ATATTTGGAAAGTTtcagaaaaagtttcttgagtATCTGCTACCGCCAAA
GAATGTAAAAATGCCTACTTATCCAGTCCTTGTTTTtcgaatcaaataaa
aaatgtagagAATTAGAAGAAACAGGGTAGCCGACATGACATCATACATT
ACCCTCTTTCGAGGTGCTGGGTACAATGGATATTagccttggttgctgca
cagacCAAATACAcgtttagcaattttcagcctaaaatgttcttaaaatg
cgttcttaatttttcagactactctaaatcgacaatatcatgcaaaataa
agagcacttaaaattggttaaattttgacaatatttgactctcgatttta
gaaaatccacgaagttgggttaaaactgcttgaaaagaggaaaaattgta
gtttctgaggcagggcatgttcttacgatgttcttaaattttcgacgaat
ttcagtcTAAATGGTCTTATGGACTggattctaataaaaaaaacgtgtat
atagaGATTAAAACGGTTTCTGATCTTTCACATTAGGagcaagaagaaga
aaaagaagaacaaagccaagaatattctagaagaagCTTCCACATCTTCT
AATTCTAAAGAATCGAAACAAGATGAAGAAGATGGTGAAAGTGATTATGA
AGAAGCTGGAAGTTCTTCAcaaaaacaagaagaagaagaaattgttATCA
AAAAGACAGCTGCCGAGTTAGCATTTGAAAAAGCTCAACAGAGAAGGGTA
TGTTTTTTAAACAACTACAATCACCCTCGATataatattgagattttagt
gtattttaacgtttttcagaatttaaagttcgggcgagaattgctatttt
ag Coding sequence (CDS) from alignment at sc0000252_pilon:26780..32331+ >XLOC_023762 ID=XLOC_023762|Name=XLOC_023762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000252_pilon:26780..32331+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGATGAGGATGATCCTTATGAATGTGTTGCATCAGGTGGTCTCCG
ATTGAAAGGTGGTAAAGTTAAAAAATGGCAGATGAGGATGATCCTTATGA
ATGTGTTGCATCAGGTGGTCTCCGATTGAAAGGTGGTAAAGTTAAAAAGa
gcaagaagaagaaaaagaagaacaaagccaagaatattctagaagaagCT
TCCACATCTTCTAATTCTAAAGAATCGAAACAAGATGAAGAAGATGGTGA
AAGTGATTATGAAGAAGCTGGAAGTTCTTCAcaaaaacaagaagaagaag
aaattgttATCAAAAAGACAGCTGCCGAGTTAGCATTTGAAAAAGCTCAA
CAGAGAAGGGTATGTTTTTTAAACAACTACAATCACCCTCGATataatat
tgagattttagtgtattttaacgtttttcagaatttaaagttcgggcgag
aattgctattttagGagcaagaagaagaaaaagaagaacaaagccaagaa
tattctagaagaagCTTCCACATCTTCTAATTCTAAAGAATCGAAACAAG
ATGAAGAAGATGGTGAAAGTGATTATGAAGAAGCTGGAAGTTCTTCAcaa
aaacaagaagaagaagaaattgttATCAAAAAGACAGCTGCCGAGTTAGC
ATTTGAAAAAGCTCAACAGAGAAGGGTATGTTTTTTAAACAACTACAATC
ACCCTCGATataatattgagattttagtgtattttaacgtttttcagaat
ttaaagttcgggcgagaattgctattttag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:26780..32331 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 76-390:5238 |
| Aaloc | 1-72:1 |
|
