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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:427521..430892+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027208 ID=XLOC_027208|Name=XLOC_027208|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3372bp|location=Sequence derived from alignment at sc0000067_pilon:427521..430892+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAAAAATGTCGGTCATCAAAGGGTCATCACCGAAGTCACCAAAGT
GTAAGTAATATGATTTTATTTGTCACCTTCACCGTGGAAGTAAACTCATG
TGACCTCAAAACTTTTGCTCTTTCACTCGCCTTCAAACTAAATAAACAGA
AcacaaaaatctaaattcttcatcaaaatttctcaaatataCATGTGTAT
ATATacgcagtatgcagtgctgacgagtcctgataaggacgaaatgcata
tgctgctctgccacccaaatctcaaATGATTTTCTGGTTTTGAGATGCTG
GCTAAATTAATCTGGCCAGTCATGAAATACACCTattctgccacccaaat
ctacTGATTGAaaatagttggacagaaatgcTTGTTTTTCACGTGTATAA
ACTTTATTAAGTTTGCAATTTGGTATCTACCCGTAGGCAGAGGAGCATGT
CGCTCTTTATGTGTTAGGTCTTGACGGTTCTTTGATATACAGAGGTACGT
GATATTCCAACTCTTCTTTCGTTTCACAGGTTAACTTGTTCATCTTCACC
AGGGGACAACGAACAGACGAATATcttggtgaatgcaatggtaaCTTCTA
TCCTCTCTTTCTCCCTCTCTTCTTCTTTCGATAGAATATTTTACGTTTGA
TCCGTCGAATAAACTGAAGACTGAATTTTGCTAGCACTAATTCAAACTGT
CGACTTTTTGTCTTACTTCCGTTGGGTTTGAAAGACtgttgaaaattgac
tgaaaaTTGATATCGATGTAACTAATTAATCGATTTCAGAAATTTCTTAT
TTCAGAAAACCTTCAAGGAAAACTTCGATGACTTTAGATCATACACTATA
TCCatccaagaaaaattgaagGTAAATGAAATTCTTCAAGTTCCCTCCCA
AAGCTTTGtcgcaaaaaatattatagctgcaaaaaatcgcaatgaGATAA
CATTTATGAGAAGATTTTTATGCATTATTCACTCATTCATTTCTGCCAAG
TCAATGAGACAGGGATGATATatgattttaaatatttcggTTCATTGTAC
ATTGTTCATTGTATCCTTTATTTTCAGACGCAATCTTCCCTGGACCTTTC
ACAATCACCTTCCGCCAACAACTCATCACCTACAACCTCCATTTCCAACA
AATTATTACGTCATCTACAAAATCGTGTGCAACAATTACGTCATGAAAAT
ATTCAATTGAAAGAGAATTTAAAGAACTCGTTAACGGTATGCCATTTGAC
GTTATCTATTGCCCATTTTTCATGATATGGTATTTTAAGATGTTTTTTGT
GGATAACTTTCGGTGAAACCTAATTCAAATGTCCATTGAAACCAAATCCG
TACACCAAGATGAAAAGACTTGTCTTTCCAAACTTTAACCTGAATGTATT
TTCTCAACTCCTTTGCTATCCACTTCCTTCGTCATCCCCGTTTATTTTCA
TAAAGTCACTGTAAAGACAGGGATTTAAAACTGTCTGTACACCATCCCCT
TGACAATGGGGTACAGCTCGAGTGAAAACGTGTTAACAAATCGTGAGAGA
TTAAATAAGGATATGTTGTTTTGTTATGAATAGTGCGAAAGATATGTGTG
TGCTTTTAACTCATTCTTCTTGTGGGTTTAAAAAACTAACGTCAAAAGTA
AATGATTTTGCCTTTCAAAATCTTTTCGTCGATGCGGTTGTATCTAGAAC
CTTCACTTTCTCGTGAAAGGTAAGCATCCTAGTTTCAATTGATTACTGAT
CACAATATTTTAACTAATCTTTAGGACAGGGATTTAATATTGTCCGTGCA
CCATCCCCTTGACAATtggatcagggggggggggtacatgtTCAGTGTAG
TGACCCATGGCCGGTGGGGTGGTGGTTTTTCGAAGTTATTTCCATTTAGT
ACATGGTAGTAAAAAGGGTGGTCTCCTaaaaaaaatccctaaaaaaaTTA
CTACCATGTACTAAATTGGGTGGTACCAAagtaaactttaattttaaagg
atAGTAATGTAGTATATTCAGCTAGATttgatcaaaccaaatcgaaaaaC
TGAAAGTTGTATTATCGTACTGCACTGTACTGCATGTGCCATaactaaaa
tctttttttcttctctttctttgtttatttttctctttctttctttttgt
tatgtttagaaatttcaatttcgaatgtttacataaaTCAGTGCGGATTT
CGCCGTGACGTTTAAAGTTATTGAAGGACTTACTtattcaaaacataaaa
tagTCATTAACTCAAGAAATGATTTTTACTAGgtttaccgtattacttcg
aataaacgtcccctcgaataaacgtcccctcgaataaacgcccctcctaa
aagaaaaattatttaataaacgccccctcaaataaatgcCCCCTTGGAAT
GAACGCCCTCTCTAgtggaggggcgtttattagaaacttgtgactttcaa
tacagattttagtcatttcttgtaaccagagcagtttttgatgcaatttt
aatcgttgaaccaaagaagttttgcactaaaattctgataaagaactaaa
acaaagaaagggcATAGTTGCTATAAATATTAGACTTTaaactaaaataa
ttaaaaaaacgcccccttcttttaaacgcccctcttaaatattaaataaa
caacccgggcgtttattcgaagtaatacggtaaatAGGTTCAAGGAGCCA
GCGAAAGCTTTTCTAtcccaaaattttagaaaaaaatcatggtTAGTATC
AATGACTGTATTTGTTATTGCTTATcagtactttttcaaaagaaccagAA
ATGGTGGTTAGTTTCCTGCAGCGTATTAAAAGGGTGGTATGAGGATTGAA
ATGGGTGGTGCTAGCTACTACAGGTTACTGAAAGGGTGGTATAGGGATTT
ATATGGGCGGTGATATCTACTACAAGTTACTAAAGGGTGGTATAAGGATT
CGAATTGGTGGTAATAGCTACTACATGGTAGTAAAAGGGGTGGTCCCCta
aaaaaaatcccagaaaaaactagtaccatgtactaaaaaagggtggtggt
cccaaattttttaaaaattaccgAAAATCAGGTTATTACCCCATGGGTTA
CTACACTGAACATGTAccccccccTGATTGGATACAGCTCGAGTGAAAAC
GTGTTAACAAATCGTGAGGGGTTCAGCATTCTAGTTTCAATTATtgatta
aaatattcttactaaTCTTTAGGTCTTTGATACAAGTGATATAACGAGGC
GAGTAGAAGATTTGGAATCTCAACTTCAGGTTAGAATATTTAACCGTCGA
ATGTCATGGATCGTATTGAAACAGCAGGGGCcgcggctccactttgaaag
tAATTGGGTCGTGATATActga Coding sequence (CDS) from alignment at sc0000067_pilon:427521..430892+ >XLOC_027208 ID=XLOC_027208|Name=XLOC_027208|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=972bp|location=Sequence derived from alignment at sc0000067_pilon:427521..430892+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAAAAATGTCGGTCATCAAAGGGTCATCACCGAAGTCACCAAAGT
ATGTACAAAAATGTCGGTCATCAAAGGGTCATCACCGAAGTCACCAAAGT
GTTAACTTGTTCATCTTCACCAGGGGACAACGAACAGACGAATATcttgg
tgaatgcaatgGTTAACTTGTTCATCTTCACCAGGGGACAACGAACAGAC
GAATATcttggtgaatgcaatgAAAACCTTCAAGGAAAACTTCGATGACT
TTAGATCATACACTATATCCatccaagaaaaattgaagAAAACCTTCAAG
GAAAACTTCGATGACTTTAGATCATACACTATATCCatccaagaaaaatt
gaagACGCAATCTTCCCTGGACCTTTCACAATCACCTTCCGCCAACAACT
CATCACCTACAACCTCCATTTCCAACAAATTATTACGTCATCTACAAAAT
CGTGTGCAACAATTACGTCATGAAAATATTCAATTGAAAGAGAATTTAAA
GAACTCGTTAACGACGCAATCTTCCCTGGACCTTTCACAATCACCTTCCG
CCAACAACTCATCACCTACAACCTCCATTTCCAACAAATTATTACGTCAT
CTACAAAATCGTGTGCAACAATTACGTCATGAAAATATTCAATTGAAAGA
GAATTTAAAGAACTCGTTAACGGTCTTTGATACAAGTGATATAACGAGGC
GAGTAGAAGATTTGGAATCTCAACTTCAGGTTAGAATATTTAACCGTCGA
ATGTCATGGATCGTATTGAAACAGCAGGGGCcgcggctccactttgaaag
tAATTGGGTCGTGATATActgaGTCTTTGATACAAGTGATATAACGAGGC
GAGTAGAAGATTTGGAATCTCAACTTCAGGTTAGAATATTTAACCGTCGA
ATGTCATGGATCGTATTGAAACAGCAGGGGCcgcggctccactttgaaag
tAATTGGGTCGTGATATActga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:427521..430892 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 337-486:3223 |
| Aaloc | 178-336:1078 |
| Aaloc | 112-177:806 |
| Aaloc | 52-111:531 |
| Aaloc | 1-48:1 |
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