|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000048_pilon:510641..514736- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039943 ID=XLOC_039943|Name=XLOC_039943|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4096bp|location=Sequence derived from alignment at sc0000048_pilon:510641..514736- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTAGACATTTCCCATTCTTCCTCTATTTTAAAAATAAGTGAAAGAAG
AAGAAGTAGCAAAGGTGCTGTTCTTATAATTGCTATAACTCACTGTTACA
CTTTACTCGGTTGTCCTGGTAAAAGACATAATTTGGGTTCTTGCAACATA
AAATCAATAATGATTATTTTTAGCATTTTTAGTAAAATGTTTTATAACCT
CCTTTTTAGAAATTTCAATCAAGATGCTAAAATGAAAATATTCAGTAACT
TATCAACAAAAGATCTCACTGAACTCACCAAATACGATGTATTCGAACTT
GAAATGTATATGTTTTTTTTTATATTTGGCTCTCCATAGTCTGAATTGAA
AGGGAGATCTATTATTGTTTTTACTGCTAATGTTTTTGTTTTACATGACA
ATAGCTGAAAATTAGTTTAAAATCGAGAACGGTTTGAATGATTCCAAATA
AAGGCTAATAGGAAAATCTTCTTTTCTTATCTGGAAACTGTTTCACAATC
GAAACAGTTGCTTTGATTGAATAGAACGGTATATAATTGCAAGACAATCA
GTTCTTATTTTATTTTAATCCGTAACTCAAGAGATTTTCTTACATTTTAT
AAATTTGAATTGTCATTTTTCTTAAAATAAACTATTCAATATACTGAAAA
TTTATTTTGGCCCTGCCATCAGTAAACATTTTAAATGAATAAATGACAGT
AGTGTTTTTATAAGGTATAAGTGATTTTACCCCTGTAAAGTATGCTACAT
TTTACACCATGAATATTAAAATAATGATACAATTTGTAAAGTTTGTCTTT
ATTAATCCTTTCAGTAAACTAGCTGTTTTGCTTGGAGAAAGCCAATTTGG
CAAGGATTTAAAATATGGAGCCGTCATCGATTGCTTTACCAACATCTTCT
TGTAAGTAAATCTTTAGTACTTTATATAGAATTAATATTTGCAGGGAGAC
TATGCAGTTTATACTACAAGACATTATCAGTAAGCTCTATATTGAGGTCG
ACAATTCTATACCACGTAATTCACGTAATTTGTTCTCAAATTACTATTTT
TAGATAGTTACTACACTATTTAGCAGTAATAATCTAAGGGTGTAAAATTT
GTAAAATCTGGCCATTTTTTGCCTTAAAATGTAAAAAAATTTCAAAAAAA
CGCACCGTTAGGGTAGATTTTTCGCCCAAATTTTCTCGAATTTGGCTAAG
GGTCTGGTATCAAGACATAATTTTGGGCTCTACGTACGGTTGTTTGTGAA
TCGAGTACGCCCCCAGGAGACTTTATATAACAATAGGTTTCAATTTTTTC
TTTAACCGCTTCATTCTATTACTAGGTTTGGGAATGAGGTTTCTCTGTCA
ATAACACAATTATCATGGTTACTGAATACTCAAGAACACTTGTTAAATCT
TTGTGAACAAGGGACCTCATTATCAAACAGTATCAGTTTACTTCACGAAT
TGATTTTCTCCTTACCTGAAAACCAAAATCAGGAGACATCCAAACAAATT
CTTGATTTTCTACTGAAAAGGTATGTTTTTTCTATTCCCTGTTTATCTTT
GACAAGCACCAGTTGACCCCCCGGACATTAAAAATCACCCCTAATTAGAG
CAAGTTTACCCCTAAAACAAGGCAAGTTTTGCAGATTTTTGCACTATTAG
TAGGGGGAATTTTGTTCGATTTTTTGGAATCGCTCGATTGTTTTGTTAGA
AGCACTGATACAAAATAAGGTCAAATTTCACACTCCTCAAATCTTAAAAA
ATCTCGAGCGGAGAGCTCTCTTAATTAGAGATATATTGCAAGTATAGGTG
ATTTCTGTACTTAACTCGAGATATTATCCCTTGAAAACCGTGTTTTTCAG
CCAGAAACAGCTATTTTGTCCAGTTTTTGTGCTTTTTGTAGCTCAATATC
TCGAGTTAGGTACTGAAATCACCTATACTTGCGATATATCTATAATCCTA
ATTTTTTGAGAGCTTACCAAAAATATACAACAGGTCCCTGTTTTCTCGAG
CTAAAATTGTCATTAATTTTTAACCCTATGATTTTTGCCTGAGACCGTCA
TATTTGTCCGAAAATCACACCAAAGTGTCCGAAAAAAATTGGAAACATCG
TAATTTCGATTCCCTTACCCCTTAGCTTTCCAAAAATTTATAACAAGTGC
TTTGACTAAACCAGTCGAGCGATTTTACAAAATGCCCTCTACTATATCCC
CCGGACAAAATATCAAATATATCCTCCAACACCCCTCCTTATGCACAAAA
ATGTTTCTGGAAGAGCCCATTAGAACTTTCTGTTGTAGATGAAGGATTAG
AACAGAAATTTCCAAAACTATATAAAAAATAGTTAAATGTCCGAATCAAA
TCTTATAAATCCTGTGATATCTGAAAAAAAAAACATCCAGTTGTAAACAG
GTCGACATCAGTCCCTTGACGCAAGATATCCGATATAGTTTAGAAGGCAA
AACTAGATGACAAAGATTTCTTCATCTTTTCAAATAGAGTTTTTTTGATT
TCAGCTTTTACCAACACTATCACCTGTACCAACACATGTTGACTAAAGCT
CAGCAAACTGTCCAACTGAATAAGATTGTAAGAGAATCAGTGTTATTTTT
TATTCTTTACCAAGCCTTGGTGATTCTGAAGCTAAATTCTTTAGAAGTTT
TTTGTGAGCTTTAAAAGCAAAGTACTATTAAAGACGATACAGTACTTTCT
ACCCACCTTTCTCCCCACCTTTCTCCCCACCTTTCTGTTGGGGAATTTTT
TCTCCAAAAGTTTCAAGCGATTTCAACTTTTTAACAGAAAGTCACATTTT
TAGTTTTTTGTATGATTTTTCTTCCTCAAAGCACATGGCAGATGTTTTTC
TTTCTTAAAAAAAATTAATTCTCCGGAATCAGCTCGTGAAAGGGGAGAGG
GAGGAGAAAGTTTTAATTTTCCTGGAGACCGAAAACTGGGCAGTTTAAAA
TTCCGGGATTGGGGGTGGCCGACCCAGAATTAAATCATTTTTCATAATTT
GCTGTATGCATAACCTCACTATTATTCTTGATTATGAAATTTCAACACAA
AAATTATTTTAGATCGACGTTGAAACGGTTCCCACGACTCAAACGTTCCC
TTGTCCTTTGGAAGAAAGCATTCTTGAAAGTTTGTATGAAGAATATCTCA
ACCCGAAACCTAAAGAAGATGATGTAAGTCTTGAAAATGTTAAAACAATT
TTTGAAAATAACTATAACTGGATTTACTGGATACTTTTAGGGATGACTAA
AGTATTTAACTTGATTAACGGTTTAAAGATGGGTGTTTTCAAGATTCTTA
GTGCAAAAAGATTTTTCAAAGAGGCGTAAAACATTTAAAAAAGCACTGTT
CTTTCATTAACTCTACTCTATACTAGTTTAAACTCTAAGTTGCCAGACTG
GAGTAATCTTGGGTCTAAGATTTTTTGTCTACTTTGCTTATTCGAAGTCA
GTAGCGTAAACAGGTGGGCGCAAAATTTTCGTACGAGAGTAGATTTTTAT
GACACTGTAATACTCTTTTCAAAATATAATTACTGTGTTATAAAAATCTG
CACTTCTACACAAATTTTGCGCCCCTCTTGTCTACGCTACTGGAAGTCTG
TATTTTTAATGTAAATCTGCCATGTTGTGTTCACAGGAAAAGTCGGCAGA
AGAAAATCCATCAAAGACATCATCCGTAACAGAATCACAACCGATTGATG
ACGTCACAACTTTGTTGGCTTCTCTTAAACCAGACGAATTAAGAAAACTC
ATTCAAGATATTGCCGAATCAAAATTCAATAGTTTTAAAGTAAGAGTTAC
TGTCAGTTTGGGAGTTTCAATTTCGCTCTATAAGTAGTGGTAGTTTTTAT
TTTGAGTTTAGGCCATAGATTTTTTTGCGGTTGAGGCCTGTCTACGAACT
TATGAATGAAAAACAGGAACACTCGCAAATGCAATCAAATTTTTTAGTAA
TTTAGATAATGTAGTATTGATATTATACCGGTAGATAAAAGTTTCAAAAT
TTTCAAAATTTATATTTTCAGGTCGAAATGGAAGGGAAGATAAGTGACAA
GGAGACTGCAATGAACAAAACATTCAGTAAGTTACACGCACGTTAA Coding sequence (CDS) from alignment at sc0000048_pilon:510641..514736- >XLOC_039943 ID=XLOC_039943|Name=XLOC_039943|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1998bp|location=Sequence derived from alignment at sc0000048_pilon:510641..514736- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTAGACATTTCCCATTCTTCCTCTATTTTAAAAATAAGTGAAAGAAG
AAGAAGTAGCAAAGGTGCTGTTCTTATAATTGCTATAACTCACTGTTACA
CTTTACTCGGTTGTCCTGGTAAAAGACATAATTTGGGTTCTTGCAACATA
AAATCAATAATGATTATTTTTAGCATTTTTAGTAAAATGTTTTATAACCT
CCTTTTTAGAAATTTCAATCAAGATGCTAAAATGAAAATATTCAGTAACT
TATCAACAAAAGATCTCACTGAACTCACCAAATACGATGTATTCGAACTT
GAAATTTTTTAGACATTTCCCATTCTTCCTCTATTTTAAAAATAAGTGAA
AGAAGAAGAAGTAGCAAAGGTGCTGTTCTTATAATTGCTATAACTCACTG
TTACACTTTACTCGGTTGTCCTGGTAAAAGACATAATTTGGGTTCTTGCA
ACATAAAATCAATAATGATTATTTTTAGCATTTTTAGTAAAATGTTTTAT
AACCTCCTTTTTAGAAATTTCAATCAAGATGCTAAAATGAAAATATTCAG
TAACTTATCAACAAAAGATCTCACTGAACTCACCAAATACGATGTATTCG
AACTTGAAATTAAACTAGCTGTTTTGCTTGGAGAAAGCCAATTTGGCAAG
GATTTAAAATATGGAGCCGTCATCGATTGCTTTACCAACATCTTCTTTAA
ACTAGCTGTTTTGCTTGGAGAAAGCCAATTTGGCAAGGATTTAAAATATG
GAGCCGTCATCGATTGCTTTACCAACATCTTCTTGTTTGGGAATGAGGTT
TCTCTGTCAATAACACAATTATCATGGTTACTGAATACTCAAGAACACTT
GTTAAATCTTTGTGAACAAGGGACCTCATTATCAAACAGTATCAGTTTAC
TTCACGAATTGATTTTCTCCTTACCTGAAAACCAAAATCAGGAGACATCC
AAACAAATTCTTGATTTTCTACTGAAAAGGTTTGGGAATGAGGTTTCTCT
GTCAATAACACAATTATCATGGTTACTGAATACTCAAGAACACTTGTTAA
ATCTTTGTGAACAAGGGACCTCATTATCAAACAGTATCAGTTTACTTCAC
GAATTGATTTTCTCCTTACCTGAAAACCAAAATCAGGAGACATCCAAACA
AATTCTTGATTTTCTACTGAAAAGCTTTTACCAACACTATCACCTGTACC
AACACATGTTGACTAAAGCTCAGCAAACTGTCCAACTGAATAAGATTCTT
TTACCAACACTATCACCTGTACCAACACATGTTGACTAAAGCTCAGCAAA
CTGTCCAACTGAATAAGATTATCGACGTTGAAACGGTTCCCACGACTCAA
ACGTTCCCTTGTCCTTTGGAAGAAAGCATTCTTGAAAGTTTGTATGAAGA
ATATCTCAACCCGAAACCTAAAGAAGATGATATCGACGTTGAAACGGTTC
CCACGACTCAAACGTTCCCTTGTCCTTTGGAAGAAAGCATTCTTGAAAGT
TTGTATGAAGAATATCTCAACCCGAAACCTAAAGAAGATGATGAAAAGTC
GGCAGAAGAAAATCCATCAAAGACATCATCCGTAACAGAATCACAACCGA
TTGATGACGTCACAACTTTGTTGGCTTCTCTTAAACCAGACGAATTAAGA
AAACTCATTCAAGATATTGCCGAATCAAAATTCAATAGTTTTAAAGAAAA
GTCGGCAGAAGAAAATCCATCAAAGACATCATCCGTAACAGAATCACAAC
CGATTGATGACGTCACAACTTTGTTGGCTTCTCTTAAACCAGACGAATTA
AGAAAACTCATTCAAGATATTGCCGAATCAAAATTCAATAGTTTTAAAGT
CGAAATGGAAGGGAAGATAAGTGACAAGGAGACTGCAATGAACAAAACAT
TCAGTAAGTTACACGCACGTTAAGTCGAAATGGAAGGGAAGATAAGTGAC
AAGGAGACTGCAATGAACAAAACATTCAGTAAGTTACACGCACGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048_pilon | genome | sc0000048_pilon:510641..514736 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 940-1014:76 |
| Aaloc | 787-939:461 |
| Aaloc | 676-786:1035 |
| Aaloc | 604-675:1592 |
| Aaloc | 409-600:2771 |
| Aaloc | 322-405:3282 |
| Aaloc | 16-318:4097 |
|
