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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:199537..202691+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042147 ID=XLOC_042147|Name=XLOC_042147|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3155bp|location=Sequence derived from alignment at sc0000133_pilon:199537..202691+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGacgttagcaaaatattttatagtGTGGTTTATCACAGTTTCGCTGAT
AATAAGTAAGTAaagaatttcattaaatttttcagtAAAGTATTAATTTA
TTCTACCCTatctactcttaggtgccaaataaacgggccccgccccgctt
gttaattttttaatttttttccaacccccccggacgttattaggaccccc
ccgtttatcaatttttgaaaaaattcccagctcccaaaagaaaagtttct
tgttttactctaaaaagcctaaatttagtctattttgacacTTTTTCGGG
TTTTtaaaaagtccattttccaacccccccggtaattaggtcccccccgt
ttatttgatttgaaaaatttttcaaacccccccccgtttattcgaacccc
cccccgtttatttggcacctaagagtaacaaAATAAGGGCCGATATATAA
GAGTACGACAAGATAAAATAACCAGGAAGCACCATTAAAATCAAAGACCC
TTTCTACTACAATACCTCGTACATTTTTATCGGCAAGTGAGACAGGGCTG
CttcaaaatcatgaattttcttaACTGTAGAAAATCTTGTGTgaaaattt
ggttcattagaaTGTAATCATCTTTTGAAATGATTTGCAGCTCCACaaat
attgaattttaattGGATATGAAAAGTATCTCTTATTGGAATCTAAAAAC
CATCAAATTAGTGGCGACTTTTCAACGACACCACAAATGAGTTCGATAAT
TTAGACCATGTGTCGATCATGTGCTAATTTCTTCTCCTAGTTAGTGTTCT
AAGAAATTCACCTGAGGTTTCAAGTTCGCTCAAGTTACCCATTAGTCTTA
TTAAACATTTACTGAGCTTCCATATgaattattattgttttttttttttg
ggggggggggttaccaCCCCTTGATGAATTTTCAATTCATCGCCAACGGT
TGGCACTTTAGGTTAAAAATCCACTCTTACGTTTTTGATTAACTATTTCC
CTACCTACCCTTTTGATAGAAATCCCCTCTAAacgattttcttcaaattt
cttccTCGGTTTTTTAGCCCAGTCGCTATCATTTGAATTCACCGGGGAAA
CTTCTCATCAGATTTTCCCATCATCACTCAACCAAGTGATCTTTCGTGTA
TCTACCAGCCTTGGCGAGAGCAACAATGCTGTTCGATATTTTATTCATAA
CGTCAACAAAGATGGCGAGGCTCCTCCTGATCGTAGTTTGTGGGGTGCCC
TGTCAGACCAGACTGATGCGGATGATTGTAGCGCCCTGGCAGAAACTTTT
TATCCGACgcctagaaaatatttttgtatagACCATCGAACAGGGGATGT
CAAACTAACCTCTTCATACAGCGTCTCTGCAGCTTTGGAGAAATATCATA
TCGATATTAAAGTGAGCGATGGTACTGATACAAAGCATCAGACTTATGAA
ATATCATACTGGCCCTCTGAATGTCAATACATACAAGCGCAGTACGATTC
GATTCAAGCGAATAGCAACTGTTATCATTCGAGAAGTAAAACTTATAAAT
TTAATATTGATTTCGATGATACAAGTGTTTATACAGCTATAACTTTAGAT
GAGCCAGGATTTTTAGTAGATATCTCATACAACAGAAGTAAACTTTCAGT
GAACGACTTTTCAACCCTCAATATAACATACGTCGGTGATGATGGTTTTG
TTACTGAGAAAATATTCACGGATGAGAAATTTCCAAATCCAGTGCCCCTA
ATTGCAGGACAAACATTATTTAGAATGGCAATTAAAGATACAACTACCGG
ACAAAATTTACTGGCTCATAGTAAGGGCTGGAGAATGTACGTTATTCTTG
GGACGAATTTTTGTTCTGCGAATGCAACGTGTATTGATTCTACTGGTCAT
TGGTTGAACGAACAAGAACGGTTAAATGAATATTGTGTAGTGGATTCTTA
TGGGTATTTACACAAGTATGGGTATTGTACAGGTATGTACGCTTTGTCTT
TCTCTTAGTCATTTTGTACTTGACCTTCCCATTACAATCTATCGACTTTC
TATAGCTTTGAAAATAATACACAAAGAGACAAACTCTCCAAAAAGAGAAA
TTTGTAAATTGGAAACTTTAAATTCCTGGTGACTGGAGATGAGGAATTAA
AGTTAACATCTCGCTTATGCAAGTAATTACAATTGCCAATTGACTTTACC
ATCTAGTAAAATGTTCATATTAATAACACACTATCACCCCTTTTGATCGA
TAGCTTTCGAAATATCATAAGAATGCTTTTTGATTTaatatttggttttt
atttgcAGAGAATCCGACACGTTTTAGTAATACCATAGCAACAACTTCGT
CTCCAaccacaacaacgaccaccaccACGGAAGGTCCAACAATATCCGCC
ACTAGTAGTGGTAAGCTAAGTTCATCTTATGACAAACTGAAATTTATCTC
GTTTCACATTGCAACACCAATTATAACCACACTAGATACAGTACAAAGCC
TACGGAGACCGCAAATTTGTTTCAAGTCATGAAAACTAGTTATCAGTCAT
TGTTAACTGAAAAGGCCATCAAACCTGTtagagttaaggagacattggag
taatacatgttttttttataggcataacgcttataagcatatgaaggctc
agatttacAGAATTCCaaacataacataagcataccatatttttcaagtt
gtcatttttatcttAAATGGTTTGGttaaggtttggtagaggtcaagtaa
aaaaaaaactttccacggcccaaaatctgaacaaatttttacaaaatttc
tgaaatttaactaaaaacttggctcgaggtgaatcataaagcatgattca
taagcatatagtAAGCTATGCCTGGATGTATACatgagcctgaccaaggg
gcatacacttgcttataaaaaaacatgtaaagaGATTCCACTGTATTGTG
CTTTACAGAAAATGgcaaaaagtttccaaaaagtGAGTTTTCATACTGAC
ATTGTAGTGAATCGAAACTACACCTTAACTCGTCTTCTTTGTTACTATTG
TTGCTGTTTCTAACTTATACTTCAAATTGCTATTTCTAACTTTCTTCTAT
AGATCCATGTCAAAACTATATTTTGGATAATGACCCAGAAAATTGGAAAA
GGAGC Coding sequence (CDS) from alignment at sc0000133_pilon:199537..202691+ >XLOC_042147 ID=XLOC_042147|Name=XLOC_042147|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2250bp|location=Sequence derived from alignment at sc0000133_pilon:199537..202691+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGacgttagcaaaatattttatagtGTGGTTTATCACAGTTTCGCTGAT
AATAAATGacgttagcaaaatattttatagtGTGGTTTATCACAGTTTCG
CTGATAATAACCCAGTCGCTATCATTTGAATTCACCGGGGAAACTTCTCA
TCAGATTTTCCCATCATCACTCAACCAAGTGATCTTTCGTGTATCTACCA
GCCTTGGCGAGAGCAACAATGCTGTTCGATATTTTATTCATAACGTCAAC
AAAGATGGCGAGGCTCCTCCTGATCGTAGTTTGTGGGGTGCCCTGTCAGA
CCAGACTGATGCGGATGATTGTAGCGCCCTGGCAGAAACTTTTTATCCGA
CgcctagaaaatatttttgtatagACCATCGAACAGGGGATGTCAAACTA
ACCTCTTCATACAGCGTCTCTGCAGCTTTGGAGAAATATCATATCGATAT
TAAAGTGAGCGATGGTACTGATACAAAGCATCAGACTTATGAAATATCAT
ACTGGCCCTCTGAATGTCAATACATACAAGCGCAGTACGATTCGATTCAA
GCGAATAGCAACTGTTATCATTCGAGAAGTAAAACTTATAAATTTAATAT
TGATTTCGATGATACAAGTGTTTATACAGCTATAACTTTAGATGAGCCAG
GATTTTTAGTAGATATCTCATACAACAGAAGTAAACTTTCAGTGAACGAC
TTTTCAACCCTCAATATAACATACGTCGGTGATGATGGTTTTGTTACTGA
GAAAATATTCACGGATGAGAAATTTCCAAATCCAGTGCCCCTAATTGCAG
GACAAACATTATTTAGAATGGCAATTAAAGATACAACTACCGGACAAAAT
TTACTGGCTCATAGTAAGGGCTGGAGAATGTACGTTATTCTTGGGACGAA
TTTTTGTTCTGCGAATGCAACGTGTATTGATTCTACTGGTCATTGGTTGA
ACGAACAAGAACGGTTAAATGAATATTGTGTAGTGGATTCTTATGGGTAT
TTACACAAGTATGGGTATTGTACAGCCCAGTCGCTATCATTTGAATTCAC
CGGGGAAACTTCTCATCAGATTTTCCCATCATCACTCAACCAAGTGATCT
TTCGTGTATCTACCAGCCTTGGCGAGAGCAACAATGCTGTTCGATATTTT
ATTCATAACGTCAACAAAGATGGCGAGGCTCCTCCTGATCGTAGTTTGTG
GGGTGCCCTGTCAGACCAGACTGATGCGGATGATTGTAGCGCCCTGGCAG
AAACTTTTTATCCGACgcctagaaaatatttttgtatagACCATCGAACA
GGGGATGTCAAACTAACCTCTTCATACAGCGTCTCTGCAGCTTTGGAGAA
ATATCATATCGATATTAAAGTGAGCGATGGTACTGATACAAAGCATCAGA
CTTATGAAATATCATACTGGCCCTCTGAATGTCAATACATACAAGCGCAG
TACGATTCGATTCAAGCGAATAGCAACTGTTATCATTCGAGAAGTAAAAC
TTATAAATTTAATATTGATTTCGATGATACAAGTGTTTATACAGCTATAA
CTTTAGATGAGCCAGGATTTTTAGTAGATATCTCATACAACAGAAGTAAA
CTTTCAGTGAACGACTTTTCAACCCTCAATATAACATACGTCGGTGATGA
TGGTTTTGTTACTGAGAAAATATTCACGGATGAGAAATTTCCAAATCCAG
TGCCCCTAATTGCAGGACAAACATTATTTAGAATGGCAATTAAAGATACA
ACTACCGGACAAAATTTACTGGCTCATAGTAAGGGCTGGAGAATGTACGT
TATTCTTGGGACGAATTTTTGTTCTGCGAATGCAACGTGTATTGATTCTA
CTGGTCATTGGTTGAACGAACAAGAACGGTTAAATGAATATTGTGTAGTG
GATTCTTATGGGTATTTACACAAGTATGGGTATTGTACAGAGAATCCGAC
ACGTTTTAGTAATACCATAGCAACAACTTCGTCTCCAaccacaacaacga
ccaccaccACGGAAGGTCCAACAATATCCGCCACTAGTAGTGAGAATCCG
ACACGTTTTAGTAATACCATAGCAACAACTTCGTCTCCAaccacaacaac
gaccaccaccACGGAAGGTCCAACAATATCCGCCACTAGTAGTGATCCAT
GTCAAAACTATATTTTGGATAATGACCCAGAAAATTGGAAAAGGAGCATC
CATGTCAAAACTATATTTTGGATAATGACCCAGAAAATTGGAAAAGGAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:199537..202691 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1075-1125:3105 |
| Aaloc | 973-1071:2311 |
| Aaloc | 58-969:1070 |
| Aaloc | 1-54:1 |
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