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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000031_pilon:351689..354899+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045225 ID=XLOC_045225|Name=XLOC_045225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3211bp|location=Sequence derived from alignment at sc0000031_pilon:351689..354899+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCGTGAGTGTATTTCAGTACATGTTGGACAAGCCGGTGTCCAAATTGG
CAATTCTTGCTGGGAACTCTATTGTATTGAGCATGGCATCACACCAGATG
GACGTATGGATACAAACGGAGGAGGATCAAATCCGAATGATGATTCTTTC
AGTACATTTTTCAGTGAGACAGGCGCTGGCAAACATGTTCCAAGAGCTGT
ATTCATTGATCTTGAACCATCAGTTGTCGGTAAGTTTGTGCTTACTTGAT
AATTGGtgtgaagtcgttgcattgacgcTAGTAAAAAAGGCCCCCCAGTG
GTTTGCATGAATACGTGAATGgacattttcggttgcgtgaatgcgtgaaa
attgaaagaaaaatgcgtgaatgcgtaaattgaaaaaacttgcgtgaatg
cgtgaatctgggctattttgtgcgtgaatacgtgaatttccCCTTTTTAT
CACTAATATTGTGTGCAGTgtgttcccgattttccaatgtttccaatGTA
TGTGCCCTGTAAAGTAGTAGTCGGAGGTGagccgaaggctcctctttcga
tggtaggggagggcgccactcttttctacctggattgctccacttaccct
tgatccttcccttaattgctgagcatcaagcagagaggcaccaagtacca
ttttgggaatctttggtatgacaacaggttgaacccacaacccaCAACAT
TTGGCGAAGACATTAAAAGGTATGCTTTGAGACTTCGATGTCTACCGTAC
CGTAATGAGTAATGTGTGATTCTATGATCTTTTATTTTCAGACGAGATCA
GAACTGGAACATACCGTCAACTGTTTCACCCTGAACAACTGATCACCGGC
AAAGAAGATGCGGCTAACAATTACGCTCGTGGTCACTACACTGTTGGTAC
GCCTTGATTTTAAAACGTTCATCGGGCtcctttaaaaataattgaactgG
TCTGGGATTTCATCAAACATTTGACTAATCTGAAATTTGTttcaaatata
ttcaaattatgCATATCGACCGACGCAGAATTAAAAATTATGATCTTTCT
ATCACGAAGATACTCGTACTCGGTAACAAGTACGAAAGTTTTATctttta
tcatttatttttgtgtGTTTAGGTAAAGAATACATCGACCAAACATTAGA
CCGTATCCGCAAACTAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGA
TCTTCCATTCATTCGGTGGAGGAACTGGATCTGGTTTTTCCTCCCTCCTC
ATGGAGCGTCTCTCCGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGC
TATCTATCCGGCACCACAAGTATCCACTGCCGTCGTAGAGCCTTACAATT
CGATCCTTACAACTCATACAACGTTGGATCATACAGATTGCGCTTTCATG
GTTGATAATGAAGCCATTTACGATATCTGCAAAAAGAACTTGGACATTGA
GCGACCAAGCTACACCAACTTGAATCGATTGATCAGCCAAATTGTCTCCT
CAATTACAGCTTCATTAAGATTCGACGGCTCATTGAATGTTGATTTGACT
GAGTTTCAAACTAACTTAGTCCCATACCCCAGAATCCATTTTCCAATGGC
GACATACGCTCCAATCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATA
CTGTCAATGAAATCACAAGGTGTTGTAGTTGTTTAATATCTTTGACTCCA
TTCCAGAAGTATTTCTGTGGATTCTTTTCAGTTCAATCATTTTGCATGAA
CATACATCTCGATCTATGCACTGCAAACTTAGCAAATcttaactcgtttt
ttttgtGATGATGAGTCAATTATAATACAGTGGAGTGTTTTTGACAACTC
GAagttctataactcgaatgtctccttaactcaaaaaaacaagttttcGT
CAGGTCCCTTCAGCTCACGATGCCATACAAGCtttactccatatctcgaa
atttcctttaCTCGAACAAGCTCGTGTTATGGAGACTCGACTGcagtgaa
taaaaaaattatgttatcTTCCCTATAGCGCTTgctttgacccgcaaaat
caacTAGTCAAATGCGATCCAAGACACGGCAAATACATGGCATGCTGTTT
GTTATACCGTGGTGATGTTGTTCCTAAAGATGTCAATACAGCTATCGCTC
AAATCAAAACCAAACGTACCATTCAATTTGTTGATTGGTGTCCAACTGGA
TTCAAAGTCGGTATCAACTACCAAGCACCATGTGCTGTCCCTGGTGGCGA
TCTTGCTAAAGTTCAACGAGCCGTCTGTATGTTGTCTAATACAACTGCTA
TCGGAGAGGCTTGGGCCCGATTGGATCATAAATTCGATTTGATGTATTCG
AAACGCGCTTTTGTTCATTGGTATGTTGGCGAAGGTTAGTgatgagtttt
gaaaaaaatttccttcaagTTTAGGAATCTTTCGAACTTTCCAAGAAAGA
GAGCCAAATTTTCCATAACTTTGATTCTAATGCGtacaatcaaaaaatat
ttgagaaaaaaagaaaattctcacAAAATCTAGGGCGCACCACACCCCTC
CCCCCACATTCAATTTCAAAGCCTGGACCCACAACTCTAActtaggttcg
aagggtagagttttaactctgagtttttaCACTAGACTTAGATCTGAGGA
CCTTAGAATTTGAGGacccaaaagttcaagaatggtccaacaaggctcag
aatatagcatCGAGTTTTATAAACCCCtcacaaattgaaatattcgatta
catttaacaaatagcccaaaagcaactttctcgcccgaacttcaaatttc
gaaaaacgtgaaaataaccaaaattctcattATATTTCATTTCGACACAT
ATTTTAGACGTTAATGACAAAAACGACAGATGAGATGGACTTTTTATAAG
acactttaataattggtcatttgaagtaataaaaatgacgcgttctttag
aaaaagtaacaaaattgttttattactggttgttaacgaccaaccaaatc
aaataagagcttgtaaaaactccatctcgtcccaaaaAGGACCTAACCAA
CAACCAACCAATCAGCTTTCTCTTTACTATGCTTCTATATAGGTATGGAA
GAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCCCTTGAAAAAGA
TTATGAGGAGGTTGGAACAGATTCTATTGATGAAGATTACGATGAACAAG
AAGAATACTAA Coding sequence (CDS) from alignment at sc0000031_pilon:351689..354899+ >XLOC_045225 ID=XLOC_045225|Name=XLOC_045225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2712bp|location=Sequence derived from alignment at sc0000031_pilon:351689..354899+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCGTGAGTGTATTTCAGTACATGTTGGACAAGCCGGTGTCCAAATTGG
CAATTCTTGCTGGGAACTCTATTGTATTGAGCATGGCATCACACCAGATG
GACGTATGGATACAAACGGAGGAGGATCAAATCCGAATGATGATTCTTTC
AGTACATTTTTCAGTGAGACAGGCGCTGGCAAACATGTTCCAAGAGCTGT
ATTCATTGATCTTGAACCATCAGTTGTCGCAGCGTGAGTGTATTTCAGTA
CATGTTGGACAAGCCGGTGTCCAAATTGGCAATTCTTGCTGGGAACTCTA
TTGTATTGAGCATGGCATCACACCAGATGGACGTATGGATACAAACGGAG
GAGGATCAAATCCGAATGATGATTCTTTCAGTACATTTTTCAGTGAGACA
GGCGCTGGCAAACATGTTCCAAGAGCTGTATTCATTGATCTTGAACCATC
AGTTGTCGACGAGATCAGAACTGGAACATACCGTCAACTGTTTCACCCTG
AACAACTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGCTCGTGGT
CACTACACTGTTGACGAGATCAGAACTGGAACATACCGTCAACTGTTTCA
CCCTGAACAACTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGCTC
GTGGTCACTACACTGTTGGTAAAGAATACATCGACCAAACATTAGACCGT
ATCCGCAAACTAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGATCTT
CCATTCATTCGGTGGAGGAACTGGATCTGGTTTTTCCTCCCTCCTCATGG
AGCGTCTCTCCGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGCTATC
TATCCGGCACCACAAGTATCCACTGCCGTCGTAGAGCCTTACAATTCGAT
CCTTACAACTCATACAACGTTGGATCATACAGATTGCGCTTTCATGGTTG
ATAATGAAGCCATTTACGATATCTGCAAAAAGAACTTGGACATTGAGCGA
CCAAGCTACACCAACTTGAATCGATTGATCAGCCAAATTGTCTCCTCAAT
TACAGCTTCATTAAGATTCGACGGCTCATTGAATGTTGATTTGACTGAGT
TTCAAACTAACTTAGTCCCATACCCCAGAATCCATTTTCCAATGGCGACA
TACGCTCCAATCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATACTGT
CAATGAAATCACAAGGTAAAGAATACATCGACCAAACATTAGACCGTATC
CGCAAACTAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGATCTTCCA
TTCATTCGGTGGAGGAACTGGATCTGGTTTTTCCTCCCTCCTCATGGAGC
GTCTCTCCGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGCTATCTAT
CCGGCACCACAAGTATCCACTGCCGTCGTAGAGCCTTACAATTCGATCCT
TACAACTCATACAACGTTGGATCATACAGATTGCGCTTTCATGGTTGATA
ATGAAGCCATTTACGATATCTGCAAAAAGAACTTGGACATTGAGCGACCA
AGCTACACCAACTTGAATCGATTGATCAGCCAAATTGTCTCCTCAATTAC
AGCTTCATTAAGATTCGACGGCTCATTGAATGTTGATTTGACTGAGTTTC
AAACTAACTTAGTCCCATACCCCAGAATCCATTTTCCAATGGCGACATAC
GCTCCAATCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATACTGTCAA
TGAAATCACAAGCGCTTgctttgacccgcaaaatcaacTAGTCAAATGCG
ATCCAAGACACGGCAAATACATGGCATGCTGTTTGTTATACCGTGGTGAT
GTTGTTCCTAAAGATGTCAATACAGCTATCGCTCAAATCAAAACCAAACG
TACCATTCAATTTGTTGATTGGTGTCCAACTGGATTCAAAGTCGGTATCA
ACTACCAAGCACCATGTGCTGTCCCTGGTGGCGATCTTGCTAAAGTTCAA
CGAGCCGTCTGTATGTTGTCTAATACAACTGCTATCGGAGAGGCTTGGGC
CCGATTGGATCATAAATTCGATTTGATGTATTCGAAACGCGCTTTTGTTC
ATTGGTATGTTGGCGAAGCGCTTgctttgacccgcaaaatcaacTAGTCA
AATGCGATCCAAGACACGGCAAATACATGGCATGCTGTTTGTTATACCGT
GGTGATGTTGTTCCTAAAGATGTCAATACAGCTATCGCTCAAATCAAAAC
CAAACGTACCATTCAATTTGTTGATTGGTGTCCAACTGGATTCAAAGTCG
GTATCAACTACCAAGCACCATGTGCTGTCCCTGGTGGCGATCTTGCTAAA
GTTCAACGAGCCGTCTGTATGTTGTCTAATACAACTGCTATCGGAGAGGC
TTGGGCCCGATTGGATCATAAATTCGATTTGATGTATTCGAAACGCGCTT
TTGTTCATTGGTATGTTGGCGAAGGTATGGAAGAAGGTGAGTTTTCAGAG
GCTCGTGAAGACATGGCTGCCCTTGAAAAAGATTATGAGGAGGTTGGAAC
AGATTCTATTGATGAAGATTACGATGAACAAGAAGAATACTAAGTATGGA
AGAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCCCTTGAAAAAG
ATTATGAGGAGGTTGGAACAGATTCTATTGATGAAGATTACGATGAACAA
GAAGAATACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031_pilon | genome | sc0000031_pilon:351689..354899 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1240-1356:3095 |
| Aaloc | 883-1236:2030 |
| Aaloc | 337-879:1125 |
| Aaloc | 232-333:794 |
| Aaloc | 1-228:1 |
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