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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000380_pilon:160742..163838+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045717 ID=XLOC_045717|Name=XLOC_045717|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3097bp|location=Sequence derived from alignment at sc0000380_pilon:160742..163838+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaaggtTAGTAGTT
ACAAATCTAGTGCAAACCTTATCCCCATAGCGAATCTTCGTATTTTCCGC
CGGATGGTGTTCGACCCACAGatttttaaagcccgaagggctagatgtcg
tgctttaagccatcgcaggcaaaaaaaagtgaatatcgcaagaaatatag
tttcTATAGTTTTAGAAAAtgcgcgaagcttctgattggaagcgctgaaa
ttctattataatgtcacgttacctaggtaggatttcctacctaaccgcgg
cacacttttcaacaaaagcacgacatctagcccttcgggctttacaaatc
TGTGGGACCCAATGAAATCAATCAAAGGGTTGTCTAAAGATCCGAGATTA
TACCCTTCAATACATGttaaatacaaataaatacaCAAGGGTCTCCTCTT
CTACACTCTTCAACCACTTAAATACTCCTGCGTCAAAGACCCGACCCCGA
CCCCCGCCCCACTGGTAAATTCACCCAAGATTTCGTCTctggtggaaaaa
aatatcctacaatgtTACCCAATGGTAAATTGACGTTGATTTCATCCTCA
CTTGAAATTCAATAGAAATATTGCACTATAAAAGATCCCATTAGGAATTC
TGGGAACGATAGAATTTCGATAAAAATACTGAGGAAAAATCACCTTTAGA
CAATCCAAAAGAGAATATAACCTTCAAGAATCCAAAACTCTTTATACCAA
TATCATTTTCTTTCCATCAAAGGAGCACCAAATTCACCAAAAGGGCAACA
AAATTACTACAATACACAAGGAGCCAGTCACATGCCACCGCAACAACAAC
AAATACCACCGCATCGAAAGAGAAGTAGTTCCAATCATCTCCAAGTGAGa
agagaagaagaagaggaGGATGTAGAAGTTTTCGACTCGTTTTTGGACAC
CAAAATGAACGGTAGTTACGTTATCGCTGGTGATTTTAATGGTAAGAAAC
GAACACCATTTATCATATTATTAGACACAGTACTTAGAATTCATAAAAAT
GAAAGCGAGTTCGAAAAAAGACTTGATACCATCAGTAGCGTGGCGGCTCG
ATCAAAGTTTAAGCAAACTGGGAAGGCAATTTTAGAAATTTGGGATCTTG
CCGTCCCCTATATTAAAAGTGAAATATCCAGAATAGGACCAGAAAAGGAT
TCCAGgctaaaataattttctccAAAGTATGGCCATCATGTGTCACCTAT
AAAACAAAGTAACATTTTTTGGTACGTTTTCCTCGACAGGAACTTGTTTT
AGTGATCCAGACTTGTGTAAGTTGAACGGGATGACCATATACACTTGGTT
GAAGATTGATGCAAAAGAATTGGAGAGTACAGAAAATGCTTTAGGACGAG
ATGCTTACATATTGAGCACTGGTGGACAATCTAAGAAATCGCGAGGTTGG
TTTACATTCAAATATTGCAcgtaaggcgaaaataaaaaaatatagtgttt
ccggaatgcaggtgaaggaaaaaagctatttttgataacttaagatcatt
gaaatagaactttaaagataacatttatttacaaacagtatgaagtaagc
cctgaatactaatgcaTCAACTaataacgaacaaaacttgatttacaagc
gagaatatctaaccaaacgacgtttgatagctttaacggtcaacttgatt
ttctttttttcacccggccgctttccggaaacactacatttttttatttt
cgccttacgGATAATTAATTTGGATTGATTTTGTATCACGTGATCAGAAG
TAATTAGGATAATTCGAAGTTCATTCGGACAACCTAGAGTTAGATATTTC
TCGCCTTGTGCACAATCTCGGTTCGAGCTTGAGAATTCCTACGAGCTCTA
CAATTTAATTTACacaatttttctatttcagGTTTCGCTTTCCTATGGTT
TCACGGTAAATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaat
tagAAATACcgaaagataaaataaaacacgATGAGTGGGTCCagctttct
tttgtttggaataCAGACACGTTAACTGGTTATCAAGATGGAACCAAAAT
AGGTAGTACCAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTA
TTATGACTATCGGACGTCCGAATAATGCAGTCGATGCACgcttcatgatg
aaaatggaaATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGAAAA
AGAACTCGATAAATCATATGAAAATAGTAAGTATTATTTGTACTCATTGC
GTAGCACAACCCTGTAGTGCTAATGTGCCTAGAAAAATGTTAACTCTGAT
CATTTACTGATTAAACCAGAAAGTTTTTACCTTGATTTAATAACTTCAAA
CTTATGGTAAAATGaataattttatggattttaaactgaataaaaatgtt
TCACTTTAACAGGGTCGATAGTGAATGAAGAATTTTAGAatttaggcaaa
aataaaaaaatgcagtgtttccggaatgcggctGAAGGAAAAAGGCTCTC
ATGCAGCCGGTCGGCAAAAGcttttttttgctaattttgataacttaaga
tcattgcaatagaactttaaagatgacttttatgtacaaacaatATGAAA
TAAGCCCTGAATACAgctgtatcaactactaacgaacaaaacttggttta
caagcgggaatatctaaccaaacaacgtttgatagcttggacggtcaact
tgatttccTTTATGAAaaaccatatagatgaacccatagtctgcggccgg
gtgagaaaatactttttgttcacccggccggtttccggaaacactatttt
tttattttagccctattttctatgttttataAGGGAAAATTGACTGAAAT
TACtaaattagatttttaattacttttcaACAAATCATTGTTAACTTCAT
TGATAGACCTGAcattcgataaaaaaattccatttttttatttttatagt
aAAACAAAAGATCGACAAGACGAGGAGACGTagtattttagaaaaacatt
ctACCATACAACAGCACCCATTGGTGAACAGGGAAATGCAAAACTAA Coding sequence (CDS) from alignment at sc0000380_pilon:160742..163838+ >XLOC_045717 ID=XLOC_045717|Name=XLOC_045717|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0000380_pilon:160742..163838+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaagGATGCTATCT
TAATGGGTGGAgctaaaatcactaaaaaagGAGCACCAAATTCACCAAAA
GGGCAACAAAATTACTACAATACACAAGGAGCCAGTCACATGCCACCGCA
ACAACAACAAATACCACCGCATCGAAAGAGAAGTAGTTCCAATCATCTCC
AAGTGAGaagagaagaagaagaggaGGATGTAGAAGTTTTCGACTCGTTT
TTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGTGATTTTAATGG
AGCACCAAATTCACCAAAAGGGCAACAAAATTACTACAATACACAAGGAG
CCAGTCACATGCCACCGCAACAACAACAAATACCACCGCATCGAAAGAGA
AGTAGTTCCAATCATCTCCAAGTGAGaagagaagaagaagaggaGGATGT
AGAAGTTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTA
TCGCTGGTGATTTTAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAG
TTGAACGGGATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAATT
GGAGAGTACAGAAAATGCTTTAGGACGAGATGCTTACATATTGAGCACTG
GTGGACAATCTAAGAAATCGCGAGGAACTTGTTTTAGTGATCCAGACTTG
TGTAAGTTGAACGGGATGACCATATACACTTGGTTGAAGATTGATGCAAA
AGAATTGGAGAGTACAGAAAATGCTTTAGGACGAGATGCTTACATATTGA
GCACTGGTGGACAATCTAAGAAATCGCGAGGTTTCGCTTTCCTATGGTTT
CACGGTAAATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaatt
agAAATACcgaaagataaaataaaacacgATGAGTGGGTCCagctttctt
ttgtttggaataCAGACACGTTAACTGGTTATCAAGATGGAACCAAAATA
GGTAGTACCAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTAT
TATGACTATCGGACGTCCGAATAATGCAGTCGATGCACgcttcatgatga
aaatggaaATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGAAAAA
GAACTCGATAAATCATATGAAAATAGTTTCGCTTTCCTATGGTTTCACGG
TAAATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaattagAAA
TACcgaaagataaaataaaacacgATGAGTGGGTCCagctttcttttgtt
tggaataCAGACACGTTAACTGGTTATCAAGATGGAACCAAAATAGGTAG
TACCAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGA
CTATCGGACGTCCGAATAATGCAGTCGATGCACgcttcatgatgaaaatg
gaaATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGAAAAAGAACT
CGATAAATCATATGAAAATAtaAAACAAAAGATCGACAAGACGAGGAGAC
GTagtattttagaaaaacattctACCATACAACAGCACCCATTGGTGAAC
AGGGAAATGCAAAACTAAtaAAACAAAAGATCGACAAGACGAGGAGACGT
agtattttagaaaaacattctACCATACAACAGCACCCATTGGTGAACAG
GGAAATGCAAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380_pilon | genome | sc0000380_pilon:160742..163838 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 763-858:3002 |
| Aaloc | 418-759:1934 |
| Aaloc | 262-414:1292 |
| Aaloc | 43-258:775 |
| Aaloc | 1-39:1 |
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