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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:248473..250884- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045837 ID=XLOC_045837|Name=XLOC_045837|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2412bp|location=Sequence derived from alignment at sc0000268_pilon:248473..250884- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACTCTAATAATTTTGATTTGATGGCTATTGGCAGACATTGTGG
TGTGGATTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAATGTGATTTTT
GCAAAAATGAATTTTGGTAAGAAAGAGTATAATTTTGAGCCTTAGCTAGG
TACTTTTTTCATATATTTTTGACAGGTTTAGTTGACACTTTTGTAGAGTT
AATTTTTCAATTCAGTTATTGTTGTTTACTCAGCTATTTTTTTTCAAAAA
GAGAACAAATTACAAATGATGTTCCATCCTTTATCTGTCACTTCTAACCT
CTTCTTCTTTCTCTTTTTTTCAGCTTGTCACACAAGGACACTCATTCTTG
CTCTGAAAAGATTGATAAAGATGTAAGCATACTTCAACTAAAGTCTGTCT
CAGCCTCAAAACCTTTTACCGTCAACTGATCTAGCTAACTTGGCACAATT
CGTCGAAACATGGGACTGTATGATATCTTGCCCTGTATTTTCACTTACTG
TTAAAACTCTTTGACAACAAATTTGTTTTGATAACTCCACCAAGTTTATC
AATCATACTTTTCATGACGTCAGCAGTTTATATAATTATTTATCTATTAT
TATTTAATCATTTTATCACTAGGAAATTTTTTGAAATGGCTGTATCTCTT
GATGAAGAAAAGGCTTTTAAAAAATTTTAAGTCTTATAGGCTGTAAAGCG
CGCCACAAATTAAATCTTTTGGAAACAGGGCGCCATTTTGTAATTATGAC
GTCATCATGTTCCTTTACGTCATGTAAATTTTGGTTGAAAAGATATTCAA
CTTTATAGATTTCCAAAAATCTAACTGCTTCCTCTATATAATTTGGGGTC
ACTTTTTAAAAGTGCCGACATCATCAAATTTAGGAGGACTAAAAAAATTT
TAAGTTGAATAAAAGTTAGAAAAACTTGTAAAATTTCAAGGCAGTAGCTC
TAAGTAGGGCTTTTGTCCCCCGTGCTAAATAGGGTTATAAACATATAGTG
CAGAAAGGGGTCTGATACCCCCTTCTTAAATGATCCCCCTTCTTGGCATT
ACCCCAACCTTTAAAAATACCTATCCCCTAAGGATTTCAGACAAAAAATT
AGCTAACAAATATATGTGAAATATCTTAAGAGAGAGAAAGCAAAATAATA
AACTTCTTTCTTCTTATTGACTCAAACAGAAAACTTTTTTTCATGAAGAC
CAAATTTCATAACAGTGCTTGAAAATAATCTACAATATATATAATTAAGT
TCCCCACTTCTCAAACTACCCCCTTCTTAAACTACCCCTTTCCCCTTCCT
TGATATCCTTCCTTTTTCATGAAAATTTCTGACCCCCCCCCCTTTATCAT
TCTTTGGAAGGTGTCAAGGGGGGAACAAACTACAAACTCTGTCTTGGTAT
TTAACACCCTTGCAATTAGGAAGACCACTGAGTCTCATTTAGTTTTTTTT
TCAAGTGGAGTTTGTTGGAATGCAGACTAGCAAATTTGTGTAATCTTTGC
CTTTATAGGTCAACACAAATTTACTGACTCGACATTTAAACTTTGAAAAA
ATAACCATTTTCCACAATATTTGCTGCTTTTTATCTTAATTACCCTACTG
ATAGAGCTACTTCTTTGTCAACAAATTTCTTTTGTTTAATCAAGGAAATC
AAAAGGGCAAATAATAATTGCATAATAAATGCATTAATTCAGTGTTTCCA
TATTATTATAAAGCTTCGTTTATTTCATTCAGAGTACAATACCAGTTTGC
CCACTTTGTCAGCAATACATTACCAAAGGAATCAATGGTGCTGACGATAA
CACCCAGGTATTTTGAGGTTTCCTATTTTAAGACATAACAAACACTTTAA
AAATATATATTAAAAGAAGACATTTTTAATTACAACGAAAAGTTGTCAAT
ATCTTGTAAGCTATGAGGATAAAATTTTGAATAAAGAAAATCCTAGCTCT
CTTTGATGCTTTAACTTTAATTCCATTCCTATCATTCCCTTCAGGTTGAA
CGACATATACAAAGTGGATGCAAGGATAATGTTTTCAAAAAACGAAAGAA
GAATAAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGATCCCATTTA
ATTGTGAACGTTGCTATCAAAGCGTTTGTGTCAGGTACGAGTTGATTTTC
TAAAAGGACAATAGATTGATAATAGATAAAAGGTATTCCATGGCAATATA
AAAAGTTATAGATAGATGTTTGAAGACCGTTTTAAAACTAATTAACAGGA
ATATTTCTTTTATAAATGTTGTATTTTGTGTGAATATTCTGCATTAGTTC
AATATGAATTTCATGTTTGTTATTGTTTCTTGATTCTAGGCACCGTCATC
CAGGAGACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTC
AAAGTTTGGTGA Coding sequence (CDS) from alignment at sc0000268_pilon:248473..250884- >XLOC_045837 ID=XLOC_045837|Name=XLOC_045837|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=906bp|location=Sequence derived from alignment at sc0000268_pilon:248473..250884- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACTCTAATAATTTTGATTTGATGGCTATTGGCAGACATTGTGG
TGTGGATTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAATGTGATTTTT
GCAAAAATGAATTTTGATGGCAAACTCTAATAATTTTGATTTGATGGCTA
TTGGCAGACATTGTGGTGTGGATTCCTGTAGAGTTTTGGATTATCTTCCC
TTCAAATGTGATTTTTGCAAAAATGAATTTTGCTTGTCACACAAGGACAC
TCATTCTTGCTCTGAAAAGATTGATAAAGATCTTGTCACACAAGGACACT
CATTCTTGCTCTGAAAAGATTGATAAAGATAGTACAATACCAGTTTGCCC
ACTTTGTCAGCAATACATTACCAAAGGAATCAATGGTGCTGACGATAACA
CCCAGAGTACAATACCAGTTTGCCCACTTTGTCAGCAATACATTACCAAA
GGAATCAATGGTGCTGACGATAACACCCAGGTTGAACGACATATACAAAG
TGGATGCAAGGATAATGTTTTCAAAAAACGAAAGAAGAATAAGTGTTCTT
CACCCAACTGTCGACAAATCAATTTGATCCCATTTAATTGTGAACGTTGC
TATCAAAGCGTTTGTGTCAGGTTGAACGACATATACAAAGTGGATGCAAG
GATAATGTTTTCAAAAAACGAAAGAAGAATAAGTGTTCTTCACCCAACTG
TCGACAAATCAATTTGATCCCATTTAATTGTGAACGTTGCTATCAAAGCG
TTTGTGTCAGGCACCGTCATCCAGGAGACCATCAATGCCTCCATGCAAAC
AGTAACCGAAATCCTTGGGTCAAAGTTTGGTGAGCACCGTCATCCAGGAG
ACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTCAAAGTT
TGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:248473..250884 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 382-453:73 |
| Aaloc | 241-378:419 |
| Aaloc | 166-240:681 |
| Aaloc | 118-165:2089 |
| Aaloc | 1-114:2413 |
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