|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000362_pilon:12248..14777+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011659 ID=XLOC_011659|Name=XLOC_011659|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2530bp|location=Sequence derived from alignment at sc0000362_pilon:12248..14777+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttttacagtaattttttGCGGTACCGCTTCGGCTGCGGATACATGCGA
TGTAGTTGAAGGTTTAGAAGGATGTGCTTGTATCATGAGAAACAGTTCAA
AAGTTGTTTCACTTCAAGACCTTGTTGGTAATAATACGAATGGCAAACCT
ATCAGGTACAGATTTTTGTATTATTAATTTGACCTATCTTTTCCGGTTAA
ATTGACTAAATATTGTGGAAATAATCCCTCCCCCCTAGTATCAATATTGA
TGAGTGGAGAGGCTGCCGCCATGCTCAGAACAACACTGGTATTAGGGGCG
AAGggatttttcaggaaattgccacatattttgtcactgattgtagcttA
CAGGTTTTTATAATAACAACTACAACTGCAttttttttCGCCAAATCGAA
CGcaacaattaaaattttaatcgctaaagattttgaaatcagaTAAGCTT
TTAAGACTTTCAATtgcattttcttacttttagaTTTGACCGAGCCGATG
GAAACAAGAAAGACTGGTACTTTGCTTATCACCCATGTGGAACCTTTGAT
ATGTTTTTGAACCGACCCAATCCAAGAGTTGGAGATTATCCTTGCAAAGA
TACTTCCGTGAGTGTTTTTACGATTTTCTCATCTTCTTGTATGAGGAcac
tcaattttatttcaatgtctATCTGGCGTCCAGATAGCGTTAGATATGTA
CGTTGAAACAACTATGTGTGCGTCAGCTATTATTCATATTCTATCTCGTC
TAAATCTGATGATTATATTGTAAGTTTATGTTGATTCGGGTTGAGTAATT
ATCCCGATTATATCGATTATCCCCTTGTTACAGAATTTTCAGGAAGCCAA
GTATTTCATAGCGATTCGGACCCCAATTTAAATATTGTTGGCTTTAAGTT
GTATTTCACAACCTGAAAAAGAAATACTAaggcgaaaattaaaaaaatgt
agtgtttccggaatgcgggtgaaggaaaaaagctctcattcggccggccg
gaaaaatttttattttgctttttttgataacctataagatcattgaaata
gaactttaaagatacaTAACTTTTATGCACAAACAGTAAGCCcggaatac
taatgtatcaactattaacgaagtctgcggccgggtcagaaaataatttt
ttagcgGTTTCCgaaaacactacattttttcattttcccctgaatgaaat
attatatataGTCATAATTTTAATCAACTTGTGGTAATCTTTCATGTTCA
TTTTTAGGTTGGACGGTTCACTGACAATGCAAATCATATCTGTGAAGGCC
TTGGTGATTTGTCGGAAAGTAAATTTGAATTCAATGAAGGTTATGAATAT
CCTGTTGTTGCACCACTATCTGTTGTTTTCAGGTAATTTATTATCGTTTA
ATTTTGTAGTAATCAAACAAAATACCTTTTAACCGTGTAGTGATTTTTCT
ACTAGCTTTATCAGTCCGTTtcctttcttttcattttgttctCTTGCTAT
GTAGAAACACCAGCTCAAGTCACGGTGCACGTATTTCATTGGTTTGTAAT
GAGACTCTTTCAGTAGAAGATACCGAGTTCAAATATCTCAATGTCACCGA
AGGACCAACCGAATATTATGTAAgtttggatttgtttttcagtgtgtttt
gtttttactaaacattttccttttggttacaagcttgattttgCCATTAG
GGGTATTTCGAAGGACAAAGAGCTAGCTAGTTCCTAAAGTAAAGTAAAGC
TAGCTAATGGCTTCACATCTAGTCACATCCCATGCTTCTCGCTTCCCCAA
CTAATTTCCCAACGAGCTAAGAGATTTACTGTATAGATTTACAAGGAAAT
CCTGTAGAAAAGAGTCACTAATTCCATTGACATCATGTTCAGGAGAATAG
TCCGCTTGTATGAGGGATTTCAATGAGCACACCAAGTTTGGAACATACTG
AAATAATATAAGCAGCACTTTTACCCAACGTTTGCGACAACAGGAACCGT
ATAGTTTGATCTATTCCAATTTGCTACCAAAGGAATGTGAGAAATCTGAT
ATTGAACGTCCGAAAGTTTTCATCTGATTAATTTCATTCATACCTCTGTT
CTTTATTGCAGCATTTCTCATTGACTGGTCCCTGTAGTTGCCCAGGAGGA
TGTAAATACATTAAACCAAAGCCCAAACCTTCAAATGCTATGACCAACTT
GCCGAATCTCGGTAAGTAAagcattgtttactttgtgaTTTATTATTTGA
TTACAATACAGTATTTCAAATAACGAGTATTCCaagatataagttatttt
tTCCTCGATGTTGATGTCTGAATAATACTCGTGAAAAAGATGGGGTATAA
TTCTTTCTTGGAAATGGTTCCTATTTTTTGACCGTGTCGCCGATAGATTT
TTCCAGGAATCTATTGAACTCTTCGACCGAAGATTTAAGTTTATTAtgtg
tttttaaatattcttctCTTTCTACGATTTTAGGTTTCATTTTCGTCACA
GCAATCATGATGGTGTTGTCTAAATTGTAA Coding sequence (CDS) from alignment at sc0000362_pilon:12248..14777+ >XLOC_011659 ID=XLOC_011659|Name=XLOC_011659|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000362_pilon:12248..14777+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttttacagtaattttttGCGGTACCGCTTCGGCTGCGGATACATGCGA
TGTAGTTGAAGGTTTAGAAGGATGTGCTTGTATCATGAGAAACAGTTCAA
AAGTTGTTTCACTTCAAGACCTTGTTGGTAATAATACGAATGGCAAACCT
ATCAGttttttacagtaattttttGCGGTACCGCTTCGGCTGCGGATACA
TGCGATGTAGTTGAAGGTTTAGAAGGATGTGCTTGTATCATGAGAAACAG
TTCAAAAGTTGTTTCACTTCAAGACCTTGTTGGTAATAATACGAATGGCA
AACCTATCAGaTTTGACCGAGCCGATGGAAACAAGAAAGACTGGTACTTT
GCTTATCACCCATGTGGAACCTTTGATATGTTTTTGAACCGACCCAATCC
AAGAGTTGGAGATTATCCTTGCAAAGATACTTCCaTTTGACCGAGCCGAT
GGAAACAAGAAAGACTGGTACTTTGCTTATCACCCATGTGGAACCTTTGA
TATGTTTTTGAACCGACCCAATCCAAGAGTTGGAGATTATCCTTGCAAAG
ATACTTCCGTTGGACGGTTCACTGACAATGCAAATCATATCTGTGAAGGC
CTTGGTGATTTGTCGGAAAGTAAATTTGAATTCAATGAAGGTTATGAATA
TCCTGTTGTTGCACCACTATCTGTTGTTTTCAGGTTGGACGGTTCACTGA
CAATGCAAATCATATCTGTGAAGGCCTTGGTGATTTGTCGGAAAGTAAAT
TTGAATTCAATGAAGGTTATGAATATCCTGTTGTTGCACCACTATCTGTT
GTTTTCAGAAACACCAGCTCAAGTCACGGTGCACGTATTTCATTGGTTTG
TAATGAGACTCTTTCAGTAGAAGATACCGAGTTCAAATATCTCAATGTCA
CCGAAGGACCAACCGAATATTATAAACACCAGCTCAAGTCACGGTGCACG
TATTTCATTGGTTTGTAATGAGACTCTTTCAGTAGAAGATACCGAGTTCA
AATATCTCAATGTCACCGAAGGACCAACCGAATATTATCATTTCTCATTG
ACTGGTCCCTGTAGTTGCCCAGGAGGATGTAAATACATTAAACCAAAGCC
CAAACCTTCAAATGCTATGACCAACTTGCCGAATCTCGCATTTCTCATTG
ACTGGTCCCTGTAGTTGCCCAGGAGGATGTAAATACATTAAACCAAAGCC
CAAACCTTCAAATGCTATGACCAACTTGCCGAATCTCGGTTTCATTTTCG
TCACAGCAATCATGATGGTGTTGTCTAAATTGTAAGTTTCATTTTCGTCA
CAGCAATCATGATGGTGTTGTCTAAATTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000362_pilon | genome | sc0000362_pilon:12248..14777 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 652-696:2486 |
| Aaloc | 550-648:2112 |
| Aaloc | 436-549:1506 |
| Aaloc | 310-432:1258 |
| Aaloc | 187-309:485 |
| Aaloc | 31-183:1 |
|
