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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000340_pilon:226754..232955- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011815 ID=XLOC_011815|Name=XLOC_011815|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6202bp|location=Sequence derived from alignment at sc0000340_pilon:226754..232955- (Clytia hemisphaerica_ch_hm2_pilon)
TCAACACGTAAAGACATTCACTACTCCATGTTCAACAACACAGGACGTAT
TGTCGAGAAAATTGATTCATCAGTTGGAGATCACAACCTATCTTCAAATT
ATCAAACCATCATGACTGATCAGAGTCCAACAAAGGAAGAGATACTTCAC
CATGTCAACTCCACAGCACTCATCACTGATGTACTTACCGGATTAGAGGA
ACTTACCGATATCATGAATGAACACAATATCAGTACAAGCTCAGACTCTG
ATAACAATGAAACAATACAATCACTCAAAGATCTTCGTCGTGACATCCGC
CATCATATGAACCAACTAAAAGTCCTCAATCCAGAAGTTCATGACGTTCA
CTCTAAAACCTATGATTCAACCATAAAGGAAGTCGGTGAGTTCATTATTG
AATGCAAAAATCACAAGACAAATCATCAGGCTCAAATGGAGAAGGCATTG
GGTGATCAAACCAAGTTACAAGAAAAATCACAGCAATTTATTGTTGATGA
CACAAACATTCTTCTGAACAGACTTGAAGTGATTTTCAACCAAAATCTTA
ACGGATGTCCGACACAGAAATTCTTCATCTCAAATCACAGCTATCAGATC
ACGACAAATCATTACGAGTTATTTCCGAAAAATACCAAGAACTTCTCAAA
ACACCATCAGCCAACGTGGAATTGGAATCTCAAATATCAGAAATTGGTGA
GAAGTACATTGAGTTGAGCAACCTAAAAGGAACCTTTATTGATTACCTCA
ATGAACAGTTTACAGATCGAGAGATTGAAAAGTACAAATCTTTCAAAGAA
TCCAACCTCAACATCAAGATTGAAAAATTTTCAGGGTATGAATCAATAGA
CATTTATACGTTCAGATCAAATTTTGAGAAAGTTCATCTACGAAATACGC
CAAAGAAACTCTTACCTGATTTACTTATAAACAATCATTTATCTGAACCT
GCCTTATCACTTGTTAAAGGCTTAACTGACATTGAAATTATCTGGAATCG
CCTAGTTGAAGCTTATGGCAACTCCAAAATGCTTGTATCTCGTAAACTTG
CTGACATAAAGAAGTTGGATCCAATCAAAACCAGACACGATCCTGCCAAA
ATCTTACGAACTATCACTGGACTGATCAAAGTACTGAGAGACTTAATTTC
TCTTGCTGAGCAACATAAAATTGAAAATCAACTTTACTACGGCGATTGTT
TGGATCAAGTGTACCAACTCTTGGACGACACCAGATTGGACAAATGGCTA
GCAACAATCTGTGAGGAAGAGATCACTGAGAAACAAAAGTGGTCAAATCT
CATCATCTTCCTGGAGAAGGACGTCAAACTTCTCCAGCAAAAGCAACTCA
TCAAACTCCCAACCAACAAAGACGATAAAGATGGCAAGTCAAAATCAGGC
AAATCAGGATATGGAAGTCATCATGTCCCACCAAGTCAAGACCCTGAACC
AGCTTGCTACTTCTGCGACGGCAAATGTCCATCTGAGCATATTCAAACAA
GAGGACCATGGGGGAAGATGGTAACTCAATATTTTGCCTGTAAACAATTT
GTCGACAATACTCCACGTGAACGACTGTCAACTCTGAAGCGCAAAGGATT
GTGCTTCCAATGTCTACTACCCGGAGCAAAATTGTCAGAAGGCAAACACA
GAGATGGAAGGTGTCAATATGAATTTGTCTGCAAGCACCCAAGTCATTCA
TCATGGACTGTTAAGAAGCACGTATTAGTCTGTGATGATCACAAAGATAC
AGATGACAATCAAACTCTTCTTCAACGTTTTAAAGACAAATTCATCAATC
GAAATCAACAGCTTCCAACCTTCGTCAAGGAGATCAAAGTCTCATTTCAC
ACTGACTGTCACATCAATGCCATGCCATCTGACAACATCCATCATTCAAG
CCCTGGCATCTACCTATTACAACAAATTTTGGTCAACAATCAGAAGTTCA
CAGTATTCTTCGACAATGGCTGCAGTGACTTTGTCATTCGAAAATCTGCA
GTCAACCGATTAGGATCATATGCTACCCAAATCTTCAGTGGAAGTGTCAA
CATTGGTGGTGTGGGTGGAACATCAACTCAATCCTCACATGGCATCTATC
TTGTCAACCTACCTCTGCACGATGGTGACATGATCCCGATGAGAGGTATA
TGCCTTGATCAGATTACGCAAACATTTCCAGTGTATCCTCTCACACCAGC
AATATCAGATCTACAAAGAGCCTACTCAACAACTGGTGATGTATCAAAAC
TCCCATCGCTTCCACAATCCATTGGCGGAGACGTCGACATCATGATTGGC
GTCAGGTACTTGAATGTCCATCCCAAACTCATCTTCCAAATGTCAACTGG
CTTATCAGTATTCGAATCTGTTTTCAATGGTCCATATACCGATGCGTTAA
CTGTCGGAACTGCAAGGATTGCAAGAGCCACGGTGCAACCGAGAATATCA
GCATCAAAGAAGAGGTGGAGCAACACCTCATTGCCAAGTCGATTCACATC
AATGAAGAAACAAACATCATCACAGCAAAACTTCCATTCACTCACAACCC
GAATGTAAAGCTTGCACCCAATAAAGACAAAGCCTTGAAAGTATATCAAC
AACAATTACGCAAACTCAACAGGAAGGAGAACCTCAAAGACAAGGAGGAT
ATCATCAACTCCGAAAAGAAGTTACAAAATCTCGGATTTGTCGATTATGT
ACGCAATTTGCCAAATGACATTCAACGTCAACTTCAGACTCAGACGAAGC
ATTTCATCCCATGGCGAGCGGTATGGAAGCCAGGATCAGTCAGCACCCCA
TGCCGAGTCGTATTTGACGCCTCATCACAGACATCAACCGGCTTCAGTTT
AAACGACATCATTGCAAAGGGTCGCAACAACATGAACCTTCTCCAAGAAA
TCGCTATTCGCTTCTTGATCCACAGAGCTGCATTCACCACAGATGTATCC
AAGATGTACAACACTGTCAAATTGTGTGAAGAACACTGGTGTTATCAACG
ATACGTATGGCAAGAGGAGCTTGATCCACAAAGAATACCAGAGGAAAAGG
TGATAAAGACTTTAATTTACGGTGTTCGATCCGCAGGGAATCAATCTGAA
TATGCCCTCCGAGAAATTGCCAGACTATCACAAGACCTGTATCCAGAGGC
ATCCAAGATCATTCTCAATGATACATATGTAGATGATTGCGTCAGTGGAG
AAGATTCAATCGAACTTGCACGTCAACGCTCTCAGGAGCTCGAACAAGTC
GTCAACAAAGGTGGATTCAAGTTAAAAGGTATCGTCATCTCAGGAGAAGA
TCCACCGGAGACAATGAGTGAAGATCAACAGAGTGTAACCGTTGCAGGAA
TGAAGTGGTTTCCAAAGCAAGATGTCATCTCATTGAACATTGGGGAAATG
AACTTTGCTCCAAAGAGAAGAGGAAAGAAATCAGCATCATCAACCAACAT
CATCCCTGACAAGCTAACAAGACGTCACTGCGCATCAAAAGTCGGGGAAG
TTTTCGATCTTCTTGGAAGAGTTACTCCCATAACCGCACAGTTCAAGCTT
GATCTTCATGACCTTGTTATCCAAAAGTTCGACTGGGACGATGTGCTTCC
TGATCACCTTCGCAAACTTTGGATCAACAATTTTGAGATGATGCAAGAAA
TCAACCAACTTAAATATCAAAGGACAATCGTACCACCTGATGCTATCAAC
CTTGAAGTTGAGACCCTGGACTTTGCTGATGCAAGCCAATCCCTTGTATG
TGTCGCAATTTATGCAAGATTCAAGCGCCAATCCGGAACCTACTCATCTC
AACTCGTTTTGTCGCGATCACGGATTGTCCCAGAAGGAATGTCTCAACCA
CGCGCAGAGTTATATGCTGCCTTACTGAATTCACACACTGGCGAAGTTGT
CCGAAAATCACTTGAGAATTGGCACCAATCTGCAATCAAATTTTGCGATA
GCCAAATCGTTCTTCACTGGCTCAGCAATGACAAAAAGACGTTGAAACAA
TGGGTTCGTAGCCGAGTTATCGAAAGTTTACGTTTCACACAATCCAATCA
ATGGTTCTACGTTCAAAGTGATCATATGATCGCAGATATTGGCACTAGAA
GAGGACCTTCAATCCCTGATGTCGATAATGATTCTCGTTGGTTCAAAGGA
GATCCTTGGATGAAACTCAACTATTCGGAAATGCCAATCGTCAAGATTTC
CGATATCAAGATGTCCAAATCTGAAGAGTCTCAAGCAGCCGTAGAAATTT
ATCACTCTGAGGTTCATCACTCCAAGCAGTCAAACCCAATTATAAGGATC
ATGGATGAAGTTAACAAACGTCTGGAATTCAGCAACTACCTGATATCACC
GCTCAAGTATCAGTTTCGAAAAGTCGTGAACATCATGGCAATCATCTTCA
AATATTTCAGAGCATTGAGGAAAAGAAGAAAATCACCAACCAATTCACCA
CTTCCTCTCAAAGCTGATTCATCATTTGTCTTCCTAGTTGAGGAGGACAT
AACATCTGCAAAGAATTATTTCTTCCGAAAAGCCACCCAAGAGATCAAGA
AGTTTCTACCATCAAAAGGAATCAAGGACATCACATCAGAGCAACACGGT
ATCCTGAAGTACACCGGTCGGATTCTTGACACTAATGACATCACAATTGT
TGGCAGATTTACCAATTCAATGAGAGACTTATCTTCATCAACATTCGTGT
ACCTGTTTTGGACAAATTCTCACCAGTAGCAGTAGCAATTGTCAACAACA
TCCATTGGTATCACATCACCGCAAAACACTCCGGTGTGGAAACTACTCTA
CGATTTGTTCATCTTCAAGCCTACATCATTGAGGGACGGTCACTTGTAAA
GATGGTACGCAGATCATGTCAAAGATGTCGCTATCTGTTGAAAAGAGCCG
TAGACGTTGCAATGGGACCGGTCTCCAGACACAATCTCACCATTGCCCCC
GCCTTCTATGCAACTCAAGTTGATCTTTGTGGACCATTCGATTCATACTC
AGCACACCACAAACGCACTACAGTCAAGATATGGCTTCTCGTTTTCTGCT
GTGCCACAACTTCAACAACAACATAAAAGTTATGGACGATTACAGCACTC
AGTCGTTCATCCTTGGCTTCACAAGATTTTCATGTGAAGTAGGATATCCG
AAAACCCTACTTTGCGACGCTGGCAGTCAACTCATTAGAGGCTGTCAAGA
CATGCGGTTCAGCTATCTCGACGTCAAACATCAACTCTTCATCAGTAATC
AAGTTGATTTCGAAGTTTGTTCTGTTGGTGCTCATAACGAACACGGCAAA
GTTGAACGAAAGATCCGTGAAATCAATTCATCCATCAATGTTGCACACCG
ACAAAAGTTATCTACACTTCAGTGGGAGACACTTGCTTCCTCTATCGCCA
ACAGCATCAATAATATGCCCTTAGCCATCAAGGGTACAATCGGAGATCTG
GAAAACCTCGATATTCTAACGCCAAATCGCCTCAAGCTTGGTCGAAACAA
TGAAAGATCACCAGTTGAACCAGTTCAGCTTGTAAGCAATCCGAGCAAGC
TTGTTGATGAAAATTGTAAGAAAAAATTGTAAGATATTCAGTTCATGGTT
TGAGAATTGGCTTTTGTCACACGTCCCAAAATTACTGAAACAGGAGAAAT
GGTTTACTACGAGTCATGAAATCAAAATTGGAGATATTGTTTTATTTTTG
AAAAATGATTCGAAAATATCTTCAACGTATCAGTATGGAAAGGTTGTTAA
TGTTGAATTTAGTTCCGATGGTTTGGCTCGTCATGCTAGTGTACGTTATA
TGAATGCTAATGAGAAAGTATTTCGTGAGACACGTCGTTCCACACGAAAT
TTAGTTATCATCAATCATGTCGATGAAGTTGATTTGTTTTATGAATTGGG
AAAGAACACTTTAAAGAACTTTTCAAAAATCAAATAAAAATTTTTTTTGT
CTTTATGGGGGGAGTGTAGAAAAATCAGTCAATTTTCATATTATATAATT
CACACAAAAAATTTATTCAGGTTATTTTCATTTCATTAAATTTATCATAT
TTGTTCAATGCAGGTCATTTTGTCAATGTTTACATTTTATACTCAATGTA
GGTCATTTTTGTCAATGTTTACATTTTATACTCAATGTAGGTCATTTTGG
TAATGTTTATTTTCAATGTAGGTCTGTATTTTATACATTGTTTACATTTC
TA Coding sequence (CDS) from alignment at sc0000340_pilon:226754..232955- >XLOC_011815 ID=XLOC_011815|Name=XLOC_011815|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000340_pilon:226754..232955- (Clytia hemisphaerica_ch_hm2_pilon)
TCAACACGTAAAGACATTCACTACTCCATGTTCAACAACACAGGACGTAT
TGTCGAGAAAATTGATTCATCAGTTGGAGATCACAACCTATCTTCAAATT
ATCAAACCATCATGACTGATCAGAGTCCAACAAAGGAAGAGATACTTCAC
CATGTCAACTCCACAGCACTCATCACTGATGTACTTACCGGATTAGAGGA
ACTTACCGATATCATGAATGAACACAATATCAGTACAAGCTCAGACTCTG
ATAACAATGAAACAATACAATCACTCAAAGATCTTCGTCTCAACACGTAA
AGACATTCACTACTCCATGTTCAACAACACAGGACGTATTGTCGAGAAAA
TTGATTCATCAGTTGGAGATCACAACCTATCTTCAAATTATCAAACCATC
ATGACTGATCAGAGTCCAACAAAGGAAGAGATACTTCACCATGTCAACTC
CACAGCACTCATCACTGATGTACTTACCGGATTAGAGGAACTTACCGATA
TCATGAATGAACACAATATCAGTACAAGCTCAGACTCTGATAACAATGAA
ACAATACAATCACTCAAAGATCTTCGTCGTCATTTTTGTCAATGTTTACA
TTTTATACTCAATGTAGGTCATTTTGGTAATGTTTATTTTCAATGTAGGT
CTGTATTTTATACATTGTTTACATTTCTAGTCATTTTTGTCAATGTTTAC
ATTTTATACTCAATGTAGGTCATTTTGGTAATGTTTATTTTCAATGTAGG
TCTGTATTTTATACATTGTTTACATTTCTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000340_pilon | genome | sc0000340_pilon:226754..232955 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 328-417:91 |
| Aaloc | 325-327:100 |
| Aaloc | 34-321:6203 |
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