XLOC_037946 (gene) - C. hemisphaerica

Overview
NameXLOC_037946
Unique NameXLOC_037946
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_340:76662..88184+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037946 ID=XLOC_037946|Name=XLOC_037946|organism=Clytia hemisphaerica|type=gene|length=11523bp|location=Sequence derived from alignment at scaffold_340:76662..88184+ (Clytia hemisphaerica)
GTAATTGTTGATGAAGACATTGTAGTAGTTGGAAACATTGAGGTGGGTGT ACAAATTTGCTCAAGTGGAAATAGTGATTTTACTTGCTTTTACTCGGTTT GATAATTACTGACGTAATCGTGTAATATATAAAAAACAGTAGAATGATGA ATGGAACAACTCTTTCCGCGTAAAGATTCCTCATCTTGGCATCCCCGACT TTTTGCCTACAAACTTAAACACTGCACTAGAAAATGtgtcttcttcttca tttgtcTTCTTCACGTTAAAAGAtattaccaaaaaaatgtagctTTCCTT GCTCACTATTTATCTCAAGAAATGGCATTAAGAGATAATCCAGgttattg ctccggcctaggagccttaaattctctctcgtccgacgacgacgacgacg gtcaagacattttttgtttgtttatctaatccgatgatctattccgattt aataaaaacggattatctgattccaataatactgtgatttgattggtcga aaggGAATTCCGGCTgaaagtatttaagaaaaaaatggctgccgaaagtg gactagccattgagtttcaagcccgaagggctagaggtcaatctctttgg taggatttgaagccaacaaatcctaccaaagttgcgcggccttgagcgac ccgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccgtcatcaaaaatacggcg catattttaaggcttcaatttttcttgcctgagaaaggttagagattgac ctctagcccttcgggcttgaaactcaatgggactaactgactgtgtagca aatactTGCAAATCTCAGagaaaaattgataattttcatcattattcatg atgttttggactagatttatgagaagtttgatgcatactggctctctaac aatgtggaaagactttggagaaattttggccatgaatNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactttcaaacacacatcc attggaatttaaaagagaatactaaaactacaacattacagtgaaaattt gaaaacgatctgagtagtttttgtggtgttatggctgaaaatgatcctgt tttgtattcatcattgttgTTGActctggcgaccgttccttttgtttctt caaacccgacacatattttttacaaacatatgactatgagaattcaataa aggatactaaaacacaattcctgtgaaaatttgaacaagattggagaaat tttcacagtgttatcaggtgttatggctgaaaatgatcgtttttggactt gtcgtaatttcattgcggctggcgaccgttccttttgatttttcaaaccc gatacagattttttacaaacatatcactatgagaattcaNatgcatactg gctctctaacaatgaatgtggaaagactttggagaaattttggccatgaa tcgtcagctgatcgagtgcttaaatcttgcacATGGCTAACAAAACCATA AAATTTTGTtggtaacttgacaatgaaactttcaaacacacatccattcg aatttaaaagagaatacaaaaattacaacattacagtgaaaatttgaaaa cgatctgagtagtttttgtggtgttatgtttatggctgaaaatgtcctgt tttgttttcatcattgcttgttgactggcgaccgttccttttgattcttc aaacccgacacatattttttacaaacatattgctatgagaattcagtaaa ggatactaaaacacaattcctttgaaaatttgagcaagattggagaaatt ttcgcagtgttatggctgaaaatgatcgttttggactttgtcgtaatttc attgcggctggtgaccgttccttttgatttttcaaacccgacacagattt tttacaaacatatcgttacgagaattcagtaaaggatactaaaacacaat tcctttgaaaatttgagcaagattggagaaattttcgcagtgttatggct gaaaatgatcgttttggactttgtcgtaatttcattgcggctggtgaccg ttccttttgatttttcaaccccgacacagattttttacaaacatatcgtt acgagaattcagtaaaggatactaaaacacaagtcctgtgaaaatttgaa caagattggagaaatttttacAGTGTTATGGACATGAAAGCTCGTTGCAG acctttgtcgtaatttcatcgcagctggcgaccgttccttttgatttttc aaacccgacacagattttttacaaacataccactatgagaattcagtaaa ggatactaaaacacaattcctgtgaaaatttgaacaagattggagaaatt tttNNNNNNNNNNNNNNtgaaaatgatcgtttttggactttgtcgtaatt tcatcgcagctggcgaccgttccttttgatttttcaaacccgacacagat tttttacaaacataaatcacgatgagaattcagtaaaggatactaaaaca caattcctgtgtaaatttgaataagatcggagaaattttcacagtgttat aactgaaaattatattttttggactttgtcataatttcattggctggggc gaccaNtctttccaatgataccaaatttataaagattgaagaattccttc aaaagttataggtaaaagaaaaaagagtgcacacttatcgtgaatagact ttaatttaggctatttttctccccaaaattttatccggacaatcaatCAA TGGCGCGTCATGGCTttgctattggcaagtttagaaaaaaattaatttac agtataagaacttggaaatattgacttctaaatgttttNcataatttcat tggctggggcgaccattccttttgaagatttttcaaacccgaaacaggtt ttttccaaatataccactatttattacatattatacactattgtaccatt ttatttggtttatcctactcttttccaagtattatcccaacagaaaaaat aatgcttagctcaAAGCCGTGAtctctaaagtctattcacgataagtgtg cactcttttttcatttacctataacttttgaNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt ctgattagtagtttgtgggcaacattctaacacaactaactcaacaagct catctttcacatcttttaatctcttaagccggagcttccagcgcagctgg tttatgtTTGCAATCCCATCTCTTTTGACTTTCAGGAAGAAGCAACGGAC TACATCGACTCTTTGGCTTTTTATCTCTTCGTAGGAATAAAAGTGTTTCT GTAAAAGACTACAAAGATTCTTCACTTCACAAAGCAACTTTTGAAAACTG GCATCCCTTGCCTCACGATCGAAATTTATTACGCTCTTCACCACAATCAG TTTTCAAGCAATTAATTAAcgaTTTCAAAATTGACTTAAGAAGTACAAAA ACTTTTAACATCCTTTGTGCCTACAAGAATCGACCATTTGAGACATGTTT TTAATGGTGGGCACACAAGGTTAATTTGGAATCAACCCAACGCTATCATA AAAAGGGCCCTACAAAGACATCACATTGTTCAGAGTTTCCTCAGACGTCA ACAGGAAAACTTCATCTATAAGAATTTCAAAGCTCTCAAAGACGCTTGGG AGTGGGTCGCTCGTTTCAGTGGAAACAAAATCTCCAACGATTACAGCTTT CACGCAGGAATGCTAAGGTTACTCTTTGCAAAGAAAAGGAAATTTACGAA GGATCATGCtttaaagttttactttttACGTTACAAAGTTTGTATCATAC ACAGTGTATTATGATATTATTGTTGTTCCtatatgaaaaaagaaaagttt ttattctatttgatcATTGTATCATGCATCATTACCTTATACCTCATATA AGTATCTCACTTTTATGAAAAATGATAATACCTTTACCTTCAATTTTAGC GTCCATTAATTTCAGGGCATTTCTTAACCTTGCTTGCTGAATTGCTAATT TAAAGATGTACCTATTTTTTTGtaactttcatttttcaggtaacaaaaat aactaataaaaagaaagaatgaGTGACAGCTCGGATGATGACAATTCACA ACCTNATTTTTCAGGTAACAAAAATaactaataaaaagaaaaaatgagtg ACAGCTCGGATGATGACAGTTCGCAACCCTCTGCCGAGGTAAAATTCTAT TCAATCGTCTTGACTAATTTAAGGGGTGTAGAGCACGAATGAAAAATGGT GTGTCTGTATCATTGCCATCAGAGGGATAATTTAATCATTAGTTTTGGTC CCATGGCTCTTTAAATAAATGGCTTGGCTAGTTGTTATGGGACATGCTAT CTATTAATCGATAGCGATTCTTTCGTTTTTCAGATGGGGGAGTTGGCAAA AATGTTATTGTCCATGAAAGACAAACCTGGCACATTTGCAACAGTTGGTG TTTTAGTATCTCCTCTCCCTGGCTTAATCATTGATGGAATTGGTCCAATC TGTCTACCCATTTGCAGTGATCAAGCCAAAAAGATAATCAACGTTGCAAG ACCAGCACCGTTTGGTTTAGGAGAAAAAACACTTGTAGATGAAACGATCA GGTATTGAATCATTTTTGACACAGGCTGATCAGGCTGATTTAGACTTtcg catttaaaaaaaattcagtatttcTTCGGAAAGACTACTTTCAGTTCAGG ACGGAGattccttcttcttttttcacatttaacaTTGAATTACAAACTGG ACGTAAAGGTTGCAAAGAAATATCGACGAGCATTTCCTTGAGGTTAGGCT TCACACCTCTATTAATCTTCATAACCTTACCACTGGAATGATCGACCAAG GCATGATCACTAGCTTGCCAGGTCTTAATTGCATCTGAAACAATGTCCAG TGAACTTGAAATGTCTGTTCCTTGATGTTTGGTTTTATGGTGAAATCTAA ACATAATGGAGATTCAGCAAACTTTTATGAGTCTTAGTCAGGGTCAACGA ATAAGCTCCTTAAAATATTCATCACCTCActtattggacctaccttggag gtcctataaattaaccgatgtccgtccgttcgttcgtccgtgcgtctgtt accagcttttctcgagattggctgattagttttttctgatttttggcaca atgatgcaaaatggtaatgcccaaaatgggacggagcccgattttcgaaa aaaagtcaattccggccgaaaatgccggaaatatgccggaaaaaccattt ttttggccttttctcgagatttcatcattagtttttttcagatttttttc acaaagatacgtattagcaatgcccaaaacatggccgagtccaatttttg agaaaaattcttttccggccgaaaatgccggaaatcgccgtttttgcaaa ttttcatcggactttttgcttatatttcgttgttttttcacacaaaaaca ttattaatagcaatgtccacgatcaagcatggttcaattgtcaataagaC TGAtgtttgaagccggaactttttaaaaatcgccggaacagccgattttc gccggaaaaacggtatttattgaatttcttgagctgtactttatattttt tcatgaaattttgctcgCTGAGGCAAAATGTtgatacctaaattgtgacg gaacccgattttcgaaaaaaattcatttccggccgaaaatgccggaaatg ccggaaatatgccggaaaaactatttttttggcattttctcgagatttta tcattagttttttctgattttttgctcaaagatgtgtattaccaatgctc aaaacatgatcgagtccgatttttgagaaaaaaatttttcccggccgaaa atgcctaaaatatgccggaaatggCGGTTTTTCTGGGtattcattggact ttttccttataattggttgttttttcattcaaaaacattattaatagcaa tgcacaccatcaagcatgtttcaatttttaataaaattgNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttgc acaatgatgcaatatgacaatacctaaaatgtgacggagcccgattttcg aaaaacatttttttccggccgaaaatgccggaaaaaccggttttttgaca ttttcatcttttgttttttctgattttttgcagaaagatgcgtattcgca atgctcaaaacatggccgagttcgatttttgagagatttttgcagatttt tattggattgtttccttatatttctatgtttttcacacaaaaacattagt gataacaatgctcaacatcaagcatgattcaattatcaataaaactgatt tttgcgaccagaactttctatttattttttccctacaacccttccctctc cccccatcatcaatcaatgatgaatttcttgcgttatgcattttcgctaa acgctatgttttctgactgattttttttcatttttctcctcgcattgcta tctaactttcatcatcaggtaggtccaatcagcatctagcttgttttttt tcaaataggaAAAGCTGGGAAATTGAACCTGCTCGAATTACTTTGGAAAA TCcgaattttcatttgaagttGAAAACTTTGGTTTCCAAAGTGAAAGAAG ATCTTGGTTGTGACAGCAATCACGTTAAATCTGAACTTTACAAACTTCTC TTATATGAAGAGGGAGGCCATTTCAAACCTCACAGAGATTCTGAGAAAGA AGATGGTATGTTTGCAACCTTGATCGTTCAACTACCTTCCGTTTTCACTG GAAATGATTTGATTGTGAACCACGATGGAAAAACAAAAACTGTGAAATTC GACCGTAAAGAATCTCGTTATGAAATGGTGTATGCAGCCCATTATGCTGA CTGCCAACATGAGGTTACTCCTTTGACGTCTGGATATCGTTTGGCACTTG TTTACAATCTGACATGGACAACACCATCAAACCCCCCTCCTAATGTGGAA AAAAGTGGAAACGCTTTGaccaaattaagttcccttCTTAAACAGGTAAC GATTCTTTATTCAACCTTTCCGATAGTTCTTAGAGTTTGGTAGGAACGGT CTTCATCATCAAGCCATTCTAAACTACAAAAGGAGACGAGTTACTTTTCT AAGCACGTTCGTAATTACATTGCCTTTTCTTTTGAGGGTTGCTTTGTGAT ATGCACTTTACATGGGCGCAGCTATTTGAGTGATTTTATACCATTGACTT AAATTCATAATCACGCCTCGTTTAAAATATTGTCAAATTTTCTATGCTAT CAGGGGTATCTCTAGAAGACCGACTTTTACTACATCAACGTTTTAAGTGT GCAATAAACCATATTTTTTCTTCCTTCAAAGGCTGCTAAAACTTGTGACG AAGTCTTCGGTTGGCCTCTTGAACACAAATACAGTGAACTCTCTCTTACG AACGGAATGGCTGCACTCAAAGGAAAAGACCGCCATGTCGTTTTGGCTCT CAACCTGGCAAACAAAGAACTTTCTCCTGCTGATCAATTCCATTTCTACA TTGCAAAGTTGGGGCGTGAAACTTCTGAGGGCGGTAAGAATTGTCGTCCT TAGCTTTGCGTTCCTCGGAGACTGAATCCTTTGCCTTTCTGAGCTTTTTA GatgaatatttcatatttttatgcAAACTTTGCTTGGGAGATGGAATGTT AGGGCAGAcatgaatttgaaaaagatcaACCGACTAGTTAACCCTTTCTT GGGCTCCACAAGGGGTTGCGCTGGTTCCTATTAGTCTTAGCGTGTACCTC AACAAAAACCGGGATAtttcattccgtttcttagtgagttccatcTGCAA TATTAAGAATTTAGAACCATTCATAAATCTTGACTTCTGTTTCTTTCCAC AGATGATTATTATGAAGATGAGGAACTCGAAGAAGATGAAACATCCATCG AAAACGCGTTCGATTTCATCGGGCGCCAAACGAGTCTAAAAAACATCTCT TTCGACGTCAAAACACAGCTCATAGGTTTGGAAGAGAAATTCCGTGGGGA CGTTGAAAGGTTTTGGGGAGATTATGACCGAGAAGAAATGGGTGAACCAA CTGGGAACGAAGGCGCTCCTTGTAGTCGGTGGTATTCAAATTACGTTGTC CTGATGATGCCAGAGCAACGGATGTTTGAATTGTTGTGCAAAGCCGGTTT CAAAGAAGCTCTATGTCAACTAACAGATGAATGCAAAAAATCCTTGCCTG GGTTTAAAGGAcattttgaaacgtttttaAAGACATTCGGAGCGTCTTCT TACATTGATACAAAGGAATATAGTAAAGGAAAGACAGATCAAAGAGAATT CTGTTCTGATGGATCAGGAGAGAAAGTGAGTAGCATTGACCGTGTTCTGA AAATGTTGACCGAATTGGCTGATCCTAAACTGACAATATTGTTAATATCA AATGTTTTGGGTTCGAAACAACCGTATCATAAAGATGGTCAAGTGTTCGG ACTTTTCCCTAGtctttcattgaaattatttgCTAGTCTATTGATATCTG TCCCTTGGAAAGAAATCGAGGAAactgtttatgacgtcattagtCACTGT TCAACCGCTCAACTTACACAATGGCTTGACCTGTATACACATTGTGGAAT ATTGGAAATTGCCAACCAAGTCATCAAAAGAAGCCTAGCGGTGTTTCCTC AACTGCAAAACAAGAACGAGCATATGTTTAAGATTTTACAATCACTCGCC GATAATGATCGTCTGCATTCGATGTGGTGGGACAATGTATCAACCTTTCC ACCTCTTGTTACAAATATTCAATGTTTGGCTTACCAATGCTCAAAATTCT CCACAGGGACTTCCATGTGTCAATTATTGTTTTCCTGTGTTGTCGAACGT GTGAAGGTCACCAGTAAAGTGGAGCGTGGAAATTACGGGTATGTTCTCTA TGAAGCGATCAAACCCATCCTTGACGACTCTTCCTACAAGGATAAGTTGA AAGAGTTGTGCCAAGGCCTCATTGTTAATGGTAATCAGCATATCATTGCT CAACTTTTAATCAGACAACCCGATATTCGACTTCATAAAGAGACTTTCAA TCTATTACTAACTACATACATGGGCTGGTTTTCGTTAGCTCAGTTCGAGA AATGTCACTTACAAGAAATTATAGACATTGCCAGAGTGCTATCACATCCT GACAGCCTCTCCAAGGAAGAACCAAAACATTTCATTGCTGCCTGTCAAAG AATTAACGACCCCGACCTCCTATCTTGTGTCATATATGAGGTGTATTCTG ACAAAAACACATCAACAGTATTCATTCATGATTTAAAAGCTCTACTCCAA TCATTACTCGCGTTGTTGACCATTAAGCCCTTCATCAAAACCTCGACCAT GTCTTCCGTTTTAATCATGATGTTCGCAAAAGGGAAGGATTACGAGGATA TCCTACAGCAGTTTGTGTCAAATCAATTTGTCGTCAATTCAGTTGATACT CTTGGTGGAGTATTGCGGACCCTGTGCCCAAAgggaaacaaagaaaaaca cgagcgcttgaaaattaacaaaagcTTTCAGGACATATTGAGAAATTATG CGCTACATTGTGCTATCGTGAAGCCTGATTCACAATGTTTCTCGCATACc cttgtttttctctttttgaacGAGAGTTGGTCACTTTCTTCAGAGCTACT TCCAATGCTGTTAAACACCGATTTCATAAATAAAGATTTCATATGTTGTT TTAAATCCGCCGTCAAGATCAAGCCAAGGAATACAGAGAATTATTTGAAG TTATTGAACGTATCCATAGACTCTTTAGCGAACCTTTTAGAGACGGGGAG AATTTTGCCTCCCAAGTATTATAATCTGATTCTGGAATTCACTAAAATTT TGTTGTCAAGTGAGTTTGATAAGCTGTCCGACAAATTAGCGTCCCTTGTT GAATTGAAGCACCACGATGTGAAAAGCATGCACGCATCACCACCCTCGAT CCTCAAACAACTGATCAATGACTTAAAGTCAACTTTCGGTAAAACAAATA TGTTCAGATTGCTTTTATCAGCCAGAGCAGAGAATTTGCGACAGATTCAA ACAGGTGGACCACCGAAACTAACATGGAATCAACCCGATGCTGTCTTGGA AGGACACCCAGCTGTTCAAAAGTTTCTGAGAGGTAACCAAGAGAAGTTTG TTTATCAGAATTTCAACGCCATTAAGGAAGCACGAAGATGGGTCGAACTA TACAGCGGGAATAATCCTTCTAAAGGATATAGTTTCCGAGGTGAAACAAG TGGCAGTGCGAAAAATTCGAAAGCGCACCTTCGTAAAGGTCGAGAGAAGT ATGACGCTCAGTTGAGTGAATATAATTCCTTGATGTCAGAATTGAATGGA TTAACCAAGCAATTACAAGCTCTCTCTAACAAGAGAATTCAAACTACAGA CTCTGATAATTCGATTCCGAAGAAAATACAAGTGATTAGTATCGATTGAA CTCGTTCGTTTTAAACTGGTTGTGTTTGGGTCGGTTACGTGGAGATCTAT TACTTTTAGCATTtcttttcgacattttagtttTCTTCTTCTAGTCTTAG TTCATTTTACATGAATGAAAGCATTTCTAAAGGTTTACTTATTAGTTTAG GCCATATTTGCATTTTATAGATCGGTATATCACCAACCTTCGAGCCTTTT TCATTTGAGTCTTGTGGCACTCATTTTCTGTTGCGTTTGTTCTTGACGCC ACCAGCTGATTTGAAATACATTTGCTTTTAACTTTCTCCTTAAAAGCAGC GTGTGCTTTGTGTCTTTGACCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060315TCONS_00060315Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060315-proteinTCONS_00060315-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_340supercontigscaffold_340:76662..88184 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.56 4.88 2.49 1.66 2.03 1.54 2.69 3.07 1.76 2.21 1.92 1.55 1.87 1.96 2.34 3.67 2.73 3.79 0.69 0.52 2.16 2.33 4.28 5.37 3.41 4.43 0.61 0.68 2.57 3.03