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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000329_pilon:351065..356213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030982 ID=XLOC_030982|Name=XLOC_030982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5149bp|location=Sequence derived from alignment at sc0000329_pilon:351065..356213- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTGGCAAAATTTGATATCCTTGGTTCTCTTTTCAGGTAGGTACAA
ACCAACAGGAATGACTACGGGGTGGTACAGTCACTTTCAGTCGGGGTTGT
GTGTGGACGGCATTTGTCGTTCTTTGTGAAATTTTTCGTTCTTTTTGTCT
TTTTTTATGATTCTTTAGATAAACACTAAGCTAAGAGAAAACTACAATTG
ATCCTCCCGCTCTTTCATACCGATTGTAAAGTAAAGTGTCCGCTAAAGTG
AGTTTGATGATTAGTCATGTTGGAGCAATGAATAAAAGGGCGGATGGGTG
GCCGGTTGGTCGGGCGGTTGGCTCAAATAGGTGCTGATTTGGAGACTAAG
GTGTCAGGAAGATGATTAGGCTGCACGCAGGACGCCTCCCCTCTAATATG
TTTTGATACTGTAGGGGAGTTTTAAACCATGTTCACATGTTACAGTTCCG
TTTCGCTCCGATATGATTTCCGTTACGGATCGAGTGTGGTCATATTGGTT
TCGGAACGTTTCAGAGTAAGAAAACGGAGCAGTTCCGTTCCGATGAAAAA
AGTGGAGCGAAACTGTTTCGATCTGTTTTGCTTTGTAACGTTTTCTTTTT
TGACGTTTCGAATTTTGACGTTCACACTTGTTTCGGAACCGTTTTGACGT
TCACACTTGGAGCAAAACGGAACAGTAACGTCTTATACATGATAAGCATC
CAAATTTTTCTTAGCAACGAAAAACTTTTCATTGTCAAAGACCCAGCGAA
GATGGGAGACTAGGGAGACTTCAGCCTCCCCACTTTTGAGCTAATGAGAT
TTTTTTTATCCTTCAGCCTCACCACTTTAACAGTTGTTTTATCGGGCCTG
ATTGTCACCACAACTGCCTCGAATAGGAAAAAATCTCCCGGATAGGTAGA
ATCCTTCCATATCAAGAAGTCCAATTGACTCTAGCTAAAAAAGTGACATT
GACTTTCTTATATGTCAACCTCGATTTTATTCATGATACTCATGATGTAA
TATTTTGTTCGAAAGTACCCAAAAAATAGCCCGGGTGTTTGCCACTAATT
TTGAGTTTAGAAAACGCCGGGCTATATTGGGTGCTTCTGTATAAAAGATT
ACGTCATGAATATCATGATCTCGCATCTCTTCTCTTTCTTCATCTCTTCA
CAATCTAGCAATCACTTTCTCGCATGCATTATACACTGGCAAAAAGAACT
GGCGGAAATCACCATTTACGAACATTAACGAAGCACATCGAGACATTTGC
ACGGAGGTTGCGAGTTTTACGCCGAACTTCTGTTCATCTTCTGCGGCGCA
ACAGTATTGTAATTGGCTTTGTGATGAACGAAAAAATAAAGGTATAAATT
CTTGACTAGACATCTCTAATCTTTTTAACTTAAGATAGATAATCGCAGAC
TTTTATAGTCTTTCGATTGTTTTTCGATTGTTCAAGAATATAAAGGTTGA
CCGTGCTAGTAGCGTCTAATGGAGTTTATATGAGTTTAGATTTATGAATC
ACAAGGGGAAAAACTGAACTGTTTATAGATGGAGTCGATATTTTACGTGG
ATAGTCCAGTAATCTAGGACTTTTAGAAAGTCTTTTGATTGTTTTCACTG
TTTATTCGCGAGAATAGATTTTGTATACCTTCTATGACTTATCAAATAAA
AATAGGAATTTACGGCCAGACGGTTCGGCAATGTAAGAATTGAACGGAAC
ATTTGGAAGAAGCGATATATTGAACGTAGAGCCTGTAGATCAAGACACCT
TAACCTCTCGGCCATTGCAATGGACCTATCATAAAACAACGGTGTCTGAA
GGGGGATTAACCACTCAAAAAATACACGTACACTTTTTTTCGATGAGTTT
ACACCCTCGGTATCTAACATCCAGAGCCCGTTGCTCCACTACTGGTGAAA
CTGGTGAAACAGCGTATAGGGGTCTTTCGGCTATAGATATTACTTAATTG
AGAATCCGTGAAACTGGTGAAACAGCTTAGAGGGGTCTATTGGCTATAGT
TATAGATATTACTTGAGAATCCGTGAAACTGGTGAAACACTTTAGAGAAG
AATATCTGGCTAAAAAAGTTCGTCGCTAATTATCCACCAAATACTTAGAA
AAGTTCGTCATTTTCAGTCCATGGTATATTGCAAACTTGCCTCTTTAATC
TACAGATTATTTGACATGTGGTCGCAAACTGGTCAAACCAAAACAAAAAG
TATATTCAAGATTCGCTGAGAACCTTCGAAGAATCATGGATGTTAACGCC
CGTTATCGAAGGGTGGTTGGGGGCGTTGGCAGTCAAGAGGGTGAATGGCC
ATGGCAAGTGAGTTTGAGGATTAATGGCACACAATGGTGTGGTGGTTCAA
TCCTTTCAAGTCGATTTATAATGACTGCTGCCCATTGTTTTGGTAAGTGC
CGACGTTTATTTTAACGGCTATCATATCACATCCAACGCCCATTTTAAAA
AATGCTGTTTTAACTTTCTTCTCTTTACACTACAATGCAACGACTTCAAA
AATAAGCCCCTTTGATTTTGACGTCAATTCACGTTTGCTAGGCCTTAGAT
TTAGAACGCCATGCATTTTAAACTTTTCAAGGGTGCAACTTTCTAGAAAT
AAGAGTATTAATGCATTTTTCAAAATCAGAGTCATTCAATGCATATCCAG
AGTCTCTGTAATAATTCCATGGTATAGAAGTGTCTTTCGGGTTTGAAGAA
TTACTGAACTCAGCTAGGAATGGATATTTTAAAAGTAAATCAGTGAAGCA
GGGTTGTAAAACTCTATACTCCTCTACCTTGATAAGATTCTTTTGTAATC
CATAACATATTCGTTCTCTCTTCCTCCAGATGAATATATTACAAGCATGA
AGCCAGAAGATTGGCATGTATATGCAGGCGATCATGAATTACGTACCAAA
GACCTTTTTGAACAACAAGTAAAAGTCAAGCGAGTTTTCTTCCATGACGA
ATACTTTCTGTATTTACATCAACATCGCAAAGGATCTTGGGTAACAGCTG
ATAATGATATTGGTATGTGTTCGTTTCCCATGATGCTTATCTTTCCAGTT
GGCATACAACGTTGCTTTAATGCATATCTAATGTTCGAACGAATAAACGC
CATCCTTTTTTCAAACGTTCTGATATGTTTTGATGATATAGGGGATGCAC
ATCGTGTATGAAATTCCCGTCCGAGAGTTGTAACAATTTTCTTAAAAAGC
TTCAGCAATCTAATGATTGTATTAATCTCTAGACATTCAAATTTATAGGT
CTCTCATATAAAATTTACTACTCAAGTTTCTAAAACTCAAAAACACAAAG
ACGTGGGTGACTCTCGGACGGGAATAGTTTACACCATACGCATCCACTAT
ATCAAAGGGATGCGTGCAGCCGGCAAAAAAATTTGCTTCTGTCTCATTAA
TTCATCGGGGGTATTCCCCTCATTTTTCCAAAGGGTTTGGAAATGAATGA
AGGGTGACGTAAAATAAGGGTAGAAAAAAACACCCTTCGACACCCTTATT
TTGATACAAAGAATTCTTAAAACTAATTTCGAATTTGCGTTTACAGCCAT
TATGGAACTTGCACAACCAATAGATCTTCAACATGAGCACCGTGGTCAAG
TCTGCCTCCCTGACAACAAGCAGCCAACCAGAGACGGACAATACTGTCAC
GTGATTGGCTGGGGTCACACGTCTTATAAAGGAAAACAACCAGACCATTT
AATGCATGCTGTTGTCATGACGATTCCTAACAAGATTTGTAATCTAGGTA
TGTTTATACTCATTCTTCTAGACGATATTATCGACCGTTAAAGTGATAGT
CGGCGGGAAAATATGGAGGTATGGTGTTGTGGTAGTATACGGAAAAAAAT
TAGTTGTAGAGTTTTGAAGAAACAGAGACTAAAACAAGCAAACTCTACCG
GCTATAAACTCCTTTCGGCAAAAAAACTCGTTTGCGAATTTCTTAGATAG
TGATTTGTCTTAGACTAGAGCATAGTCTATCATTCTCCCAACTAGCCCAA
GATAAATCCAGTTATGGAAACAACTTTGTAATTCATGATATTGAAATCGT
CATGCCGTATAATTTTTTTCATGAAGACCCTCATTTTGCTAGTCGTGGCA
AATTCAAGCTAGAGAAAGATTGCTTAATTTGCCCTTGAGGAAAATTTAAA
ATATGCCATTATTGGCAAGATATATAGAAAATCTTTTTTTGTTGAACACA
TTTGCAACCACGTGATACAATCTTTGGGTTTTCGTTCCCTAGTTCCCAGT
TTTCCCATAGACATAAAATTTTGACGTCATTTCTTGCTGGTAAACTACTC
GATCAAATAATACACGATTTTGTGACTCTCCTATATTTTCAGAGATGGCA
TACAATGGTACGGTGAAGGAGAAATATTTGTTATGTGCAGGGTACAAAGA
GGGCGGTATTGATGCCTGCAATTATGACAGTGGAGGTGCTATGGTCTGTC
ATACAAATGGTATGTTATAATAACGTCCATCTGACATCCATAGAACGTTA
GATGAACGTTAGATGAACGTTAAAACAAAGCTGTGTTAGAGAAGCATTGT
CTCTGTGTACAGTGTGTCCGAGACAAATTTTAAATTTTTTCAGCTTTTTT
TCCGAGACACAATGTAAACCAGGCTTTATGACGTTCGTCTGGATAACATT
GAAAATCATTTATTACATTACGAAAACTATAGAACAGAATGCTAAAAATT
ACAAACATCTTTAGCAAAATTTTGACTACTTTAGCACATTTCTTATGTTT
GCTGAAAGGTTCTGGATCATGTGCATTTGAAGATTTTGTAAGATTCTGGA
AAAGAGAATTATCAATAGCCACTGGCAACCTCGACCTAGAGTCTACTTCT
ACTTAGACTCTGAACTTCTTTGCTTTCTGTTAATTTTGTCATCAAAGCAT
AGAGTCCAGTAAAGTATCATTTATTAGCGCAACTCAGTCCATAAATACCC
CCCGGGTGCTGATCACCCAATGCTCCTATGACTTTCTTTGCATTCTATTG
TAGGTCGATGGTACGCTCAAGGCATTGTATCGTCTGGATTTGAATGCGCA
ACACCGAACGCTTACGGACTCTACACTCGAGTATCACAGGACAAGGAATG
GATTATAGAAACCTTACTCAAATCTGCTGCTCCAAAACCAATATATTAG Coding sequence (CDS) from alignment at sc0000329_pilon:351065..356213- >XLOC_030982 ID=XLOC_030982|Name=XLOC_030982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2214bp|location=Sequence derived from alignment at sc0000329_pilon:351065..356213- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTGGCAAAATTTGATATCCTTGGTTCTCTTTTCAGATGTTCTGGC
AAAATTTGATATCCTTGGTTCTCTTTTCAGCAATCACTTTCTCGCATGCA
TTATACACTGGCAAAAAGAACTGGCGGAAATCACCATTTACGAACATTAA
CGAAGCACATCGAGACATTTGCACGGAGGTTGCGAGTTTTACGCCGAACT
TCTGTTCATCTTCTGCGGCGCAACAGTATTGTAATTGGCTTTGTGATGAA
CGAAAAAATAAAGCAATCACTTTCTCGCATGCATTATACACTGGCAAAAA
GAACTGGCGGAAATCACCATTTACGAACATTAACGAAGCACATCGAGACA
TTTGCACGGAGGTTGCGAGTTTTACGCCGAACTTCTGTTCATCTTCTGCG
GCGCAACAGTATTGTAATTGGCTTTGTGATGAACGAAAAAATAAAGATTA
TTTGACATGTGGTCGCAAACTGGTCAAACCAAAACAAAAAGTATATTCAA
GATTCGCTGAGAACCTTCGAAGAATCATGGATGTTAACGCCCGTTATCGA
AGGGTGGTTGGGGGCGTTGGCAGTCAAGAGGGTGAATGGCCATGGCAAGT
GAGTTTGAGGATTAATGGCACACAATGGTGTGGTGGTTCAATCCTTTCAA
GTCGATTTATAATGACTGCTGCCCATTGTTTTGATTATTTGACATGTGGT
CGCAAACTGGTCAAACCAAAACAAAAAGTATATTCAAGATTCGCTGAGAA
CCTTCGAAGAATCATGGATGTTAACGCCCGTTATCGAAGGGTGGTTGGGG
GCGTTGGCAGTCAAGAGGGTGAATGGCCATGGCAAGTGAGTTTGAGGATT
AATGGCACACAATGGTGTGGTGGTTCAATCCTTTCAAGTCGATTTATAAT
GACTGCTGCCCATTGTTTTGATGAATATATTACAAGCATGAAGCCAGAAG
ATTGGCATGTATATGCAGGCGATCATGAATTACGTACCAAAGACCTTTTT
GAACAACAAGTAAAAGTCAAGCGAGTTTTCTTCCATGACGAATACTTTCT
GTATTTACATCAACATCGCAAAGGATCTTGGGTAACAGCTGATAATGATA
TTGATGAATATATTACAAGCATGAAGCCAGAAGATTGGCATGTATATGCA
GGCGATCATGAATTACGTACCAAAGACCTTTTTGAACAACAAGTAAAAGT
CAAGCGAGTTTTCTTCCATGACGAATACTTTCTGTATTTACATCAACATC
GCAAAGGATCTTGGGTAACAGCTGATAATGATATTGCCATTATGGAACTT
GCACAACCAATAGATCTTCAACATGAGCACCGTGGTCAAGTCTGCCTCCC
TGACAACAAGCAGCCAACCAGAGACGGACAATACTGTCACGTGATTGGCT
GGGGTCACACGTCTTATAAAGGAAAACAACCAGACCATTTAATGCATGCT
GTTGTCATGACGATTCCTAACAAGATTTGTAATCTAGCCATTATGGAACT
TGCACAACCAATAGATCTTCAACATGAGCACCGTGGTCAAGTCTGCCTCC
CTGACAACAAGCAGCCAACCAGAGACGGACAATACTGTCACGTGATTGGC
TGGGGTCACACGTCTTATAAAGGAAAACAACCAGACCATTTAATGCATGC
TGTTGTCATGACGATTCCTAACAAGATTTGTAATCTAGAGATGGCATACA
ATGGTACGGTGAAGGAGAAATATTTGTTATGTGCAGGGTACAAAGAGGGC
GGTATTGATGCCTGCAATTATGACAGTGGAGGTGCTATGGTCTGTCATAC
AAATGAGATGGCATACAATGGTACGGTGAAGGAGAAATATTTGTTATGTG
CAGGGTACAAAGAGGGCGGTATTGATGCCTGCAATTATGACAGTGGAGGT
GCTATGGTCTGTCATACAAATGGTCGATGGTACGCTCAAGGCATTGTATC
GTCTGGATTTGAATGCGCAACACCGAACGCTTACGGACTCTACACTCGAG
TATCACAGGACAAGGAATGGATTATAGAAACCTTACTCAAATCTGCTGCT
CCAAAACCAATATATTAGGTCGATGGTACGCTCAAGGCATTGTATCGTCT
GGATTTGAATGCGCAACACCGAACGCTTACGGACTCTACACTCGAGTATC
ACAGGACAAGGAATGGATTATAGAAACCTTACTCAAATCTGCTGCTCCAA
AACCAATATATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000329_pilon | genome | sc0000329_pilon:351065..356213 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 964-1107:145 |
| Aaloc | 847-960:806 |
| Aaloc | 646-843:1602 |
| Aaloc | 463-642:2319 |
| Aaloc | 226-459:2993 |
| Aaloc | 43-222:3990 |
| Aaloc | 1-39:5150 |
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