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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:726072..728946- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001072 ID=XLOC_001072|Name=XLOC_001072|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2875bp|location=Sequence derived from alignment at sc0000049_pilon:726072..728946- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGACGTTGA
CCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTACCACCTG
ATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATGCAATTC
CCTTGTGGTCATGGTACTTGTAACTATTGTCTACAATCGCTGGCTAAAAG
CAGGTGGGTGGCTGATACCTTTGAAAGTTGCATTTTCAGTAATTTCCGAA
CTTTCATATCTTGTATTATTATGGAATCTTTGCGATTTGCTATGGAATCT
TTAAAACTTGACATGTTGTTATGCCTGTTGTAATCTTTTCAAGAGTTCAT
TATTCTTTGCCTTCAGAATCTAATCCGAACGTTTATCCTCGATCAAGTAG
GCGTGTTAGAGGTTTGAGAGGTTTTTGTACTGTTGACGTCTTATAAATCT
TGTCAACAAATATCGAGCGCAAAATTTGAAGTGCAAAATAAAGTTTCGAC
AACTCTTTTGCTAGTGAAACTGGGAAGTTCAATTTGTTTATCATTAGTCA
TGAACATTGACAAAAAAGGTATCAAATAATTTCCTGTTTGTTTATTTTTA
GCTTATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGATACCA
ATCAAAAAAGTGAGTAAATATTTCACATGAAGGGTTTTTTTTTCAACCTA
GCAAGTTTTGATTTTCACTGACTTCAAATATTATGAAAATATTCTGTTTT
TTTACACTGGCCTTGAATATTACCAAATACAGTTGACTCTCGCTTATTCG
AAGGGGCATCCAATTTGTTCGAATTACAGGGAGATTAGTATTAGAGGGGT
TTTATGAAAGGGTTTTTACTTTGAAGGGTGGGACAAGGAATGTTGTTTTT
GGTTAAAATTTAAAAATTTGAATATGGGGGGGGGGCGGAGGATATAAATT
TTTTTATAAATTTACCCCCCCCCCCGGACATGATGAATTTTGACCCCCGG
AAATCAGGTCTAACCCCTCCCCCCTCCCGGACAAGCATCAGTTGACCCTC
TGGATATTAAATATTACCCTCAAACGGAGCAAAATCACCCGAAAACAGAG
CAAGTTTTTAACACCCCGAACAAGGCAAATTTTGTAGATTTTTTTACTAC
CACAGGACATTATATCCTCCACTCCACCCCCCACCTCCCATGTACGATCA
TTTTCTGGAAGAGCCCATTTTAGAAAGATTTGAACCGTTTATTCGAATAT
GCGTGAGTCAATCTTTACGGGTTGCTTTAAGAATTCCAGTTTAAATATTA
CTATCAATTTTCGTTTTCCTAGGCACTGAAAAACGTAATGTTGAAGCGAT
TCATCGAAGCACTTCGTGTCAAATGTATAAACTCTTGGCGAGGGTGTACT
TGGGTCGGAGAAGTCAGCAACATAAAGGTTAGTTAAAATGAAATAACGTG
GCAATGATAATGTCTGTAGTGTGAGGAAATTCAAAATTCTATCATTTCAG
TACTTTCTACTTACTTTATCCATACGTAATCCTTAAATCAATTTAAAGTA
TATTTTGGGAAATTTCTTCATAATTTTTTATAAAAGGCAGTATCAATCAC
AAGTAAGATATCGGCCCTGGAAAATCAAGGTGTATAATGGAATTTTCATG
ATAAAGTCTATTGGTAATAGACGAAATTCCAGAGATGGATCTTGTAAACT
TTGAAATGAAAATCCAAGGGGGTACCCCCTTCTACCCCATCTAAAACTTC
AAGACAACTTGCTAAAATGTAAGCAGAAGACGTCCGTCCCATCCAAAATT
GACCTCTTCAACATTGGGTGTATAACAATTATATATTTCTTCTGCTGTAG
GATCATTCGTGTGATTATGAAATGACGAAATGTACAAATGCTGGTTGTGG
TGCAGAAATTGAGAAGAAATCTTTACCGGATCATCTGTTAAAATGCAATG
TGAGTATATATGTTTCCTTTTACTTCTTGATAACGAGGTCATTTTTGTGG
TTTGCTGATATGTCTTGTTACTGGCAATTCAAATTATCTTATAAAGTCTT
ATTTTTATTTTGTAGGTAAAAGCAGCCGAAACGGATGAACTAAAACAGAA
AGTCAAAGATCAATCTAAAGAGATCACAGATCTCAAAACGCAATTAACAG
ATTACGAACAATTAAAAACAGATCATCAAAATCTACAGACAGAACAACAA
AACTTACAAAATTTTAATCAATTTCTGCAAGCCAGAATAGATGTACTGGA
GACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCACCTATTACTA
TAGAAGATACTGAAAAGAAACCGTTCATGACGCTGGAAGATTTAGAGTGT
ATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAGATTGTGAAAA
TGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCAAACGTTGACT
CGCATACCTTACACTCACCAAATGCTATTCCAGAGTCTCCAGAAAGGTTA
TCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAACCACTTTCAA
CCGTACTGATAGTGGTAATAGCTTTACACATTCAACGGCTGGCCCGTCTT
CTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTATTTCAACAAT
CTTTCAGTCTCTTCTCCTCTCCATATGAACAATCGTCCACGTACACCGCA
GTCACTGTATGAAAACAATAATGATAGTGGTAATAGCTTTACACAATCAT
CAAATTTACCACATTCTTCATCATTTTTCAATCCATTCTCGTATCAAAAC
AGTAGTGACACTGCGTCAACGTCCCGTATTTTTTCTCCATACGATTTCAG
TAATATTGGTGCTAATTTTCAATAA Coding sequence (CDS) from alignment at sc0000049_pilon:726072..728946- >XLOC_001072 ID=XLOC_001072|Name=XLOC_001072|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2550bp|location=Sequence derived from alignment at sc0000049_pilon:726072..728946- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGACGTTGA
CCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTACCACCTG
ATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATGCAATTC
CCTTGTGGTCATGGTACTTGTAACTATTGTCTACAATCGCTGGCTAAAAG
CAGATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGACGT
TGACCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTACCAC
CTGATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATGCAA
TTCCCTTGTGGTCATGGTACTTGTAACTATTGTCTACAATCGCTGGCTAA
AAGCAGCTTATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGA
TACCAATCAAAAAACTTATCAAAAAGTCGACCGCTGTGTCCACAATGTAG
AAGTCCGATACCAATCAAAAAAGCACTGAAAAACGTAATGTTGAAGCGAT
TCATCGAAGCACTTCGTGTCAAATGTATAAACTCTTGGCGAGGGTGTACT
TGGGTCGGAGAAGTCAGCAACATAAAGGCACTGAAAAACGTAATGTTGAA
GCGATTCATCGAAGCACTTCGTGTCAAATGTATAAACTCTTGGCGAGGGT
GTACTTGGGTCGGAGAAGTCAGCAACATAAAGGATCATTCGTGTGATTAT
GAAATGACGAAATGTACAAATGCTGGTTGTGGTGCAGAAATTGAGAAGAA
ATCTTTACCGGATCATCTGTTAAAATGCAATGATCATTCGTGTGATTATG
AAATGACGAAATGTACAAATGCTGGTTGTGGTGCAGAAATTGAGAAGAAA
TCTTTACCGGATCATCTGTTAAAATGCAATGTAAAAGCAGCCGAAACGGA
TGAACTAAAACAGAAAGTCAAAGATCAATCTAAAGAGATCACAGATCTCA
AAACGCAATTAACAGATTACGAACAATTAAAAACAGATCATCAAAATCTA
CAGACAGAACAACAAAACTTACAAAATTTTAATCAATTTCTGCAAGCCAG
AATAGATGTACTGGAGACGGAGCAAAAGAAACGAGACAGGAGAATAACAA
ACTCACCTATTACTATAGAAGATACTGAAAAGAAACCGTTCATGACGCTG
GAAGATTTAGAGTGTATTGTTATCAGTGACGACGATGAGAAAAATGGTTT
ACCAGATTGTGAAAATGCTCTACCACATTCCGTGCACTCTACAAACACTG
ATGCAAACGTTGACTCGCATACCTTACACTCACCAAATGCTATTCCAGAG
TCTCCAGAAAGGTTATCTACACCTTTTGCTGATATTGAAAGTATTATATC
ACGAACCACTTTCAACCGTACTGATAGTGGTAATAGCTTTACACATTCAA
CGGCTGGCCCGTCTTCTTCGAATGATGTAAACGGGCTACCATATTCTTCA
CAGTATTTCAACAATCTTTCAGTCTCTTCTCCTCTCCATATGAACAATCG
TCCACGTACACCGCAGTCACTGTATGAAAACAATAATGATAGTGGTAATA
GCTTTACACAATCATCAAATTTACCACATTCTTCATCATTTTTCAATCCA
TTCTCGTATCAAAACAGTAGTGACACTGCGTCAACGTCCCGTATTTTTTC
TCCATACGATTTCAGTAATATTGGTGCTAATTTTCAATAAGTAAAAGCAG
CCGAAACGGATGAACTAAAACAGAAAGTCAAAGATCAATCTAAAGAGATC
ACAGATCTCAAAACGCAATTAACAGATTACGAACAATTAAAAACAGATCA
TCAAAATCTACAGACAGAACAACAAAACTTACAAAATTTTAATCAATTTC
TGCAAGCCAGAATAGATGTACTGGAGACGGAGCAAAAGAAACGAGACAGG
AGAATAACAAACTCACCTATTACTATAGAAGATACTGAAAAGAAACCGTT
CATGACGCTGGAAGATTTAGAGTGTATTGTTATCAGTGACGACGATGAGA
AAAATGGTTTACCAGATTGTGAAAATGCTCTACCACATTCCGTGCACTCT
ACAAACACTGATGCAAACGTTGACTCGCATACCTTACACTCACCAAATGC
TATTCCAGAGTCTCCAGAAAGGTTATCTACACCTTTTGCTGATATTGAAA
GTATTATATCACGAACCACTTTCAACCGTACTGATAGTGGTAATAGCTTT
ACACATTCAACGGCTGGCCCGTCTTCTTCGAATGATGTAAACGGGCTACC
ATATTCTTCACAGTATTTCAACAATCTTTCAGTCTCTTCTCCTCTCCATA
TGAACAATCGTCCACGTACACCGCAGTCACTGTATGAAAACAATAATGAT
AGTGGTAATAGCTTTACACAATCATCAAATTTACCACATTCTTCATCATT
TTTCAATCCATTCTCGTATCAAAACAGTAGTGACACTGCGTCAACGTCCC
GTATTTTTTCTCCATACGATTTCAGTAATATTGGTGCTAATTTTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:726072..728946 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 466-1275:811 |
| Aaloc | 367-465:1026 |
| Aaloc | 262-366:1554 |
| Aaloc | 205-261:2274 |
| Aaloc | 1-201:2876 |
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