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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1396822..1402276- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030407 ID=XLOC_030407|Name=XLOC_030407|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5455bp|location=Sequence derived from alignment at sc0000043_pilon:1396822..1402276- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATAAATATTCTCAAAACTGGACTTGGACATATTGAAAACAAAAT
TCTTGCATGCAATATGTTTCCTGGTGATATGGTAATAATTATCTTATTAA
AAAAGGAAATCTAAAGGGTGAATTAGTGAAAATGTTCAACTTTTATATAT
TAATTATTAAGGCTTGCATTATCCTGAATTAAGGAAGTTCAAGGTATATT
GAATATAAGCCTATCAAGTCACCAAAATCACCCATGCCGACATAATAATG
AATTTCCATCATATTTCAAATTTGTATTTCTGTTTCAGAATAATCCAGAT
GGTTATTGCTTTGTCCAATTTGAAGATAACAATGCTGCTTGTCAAGCAAT
GACATTTTTGAATGGTCGTGATTTTTGTGGAAAGGTAACAAATCCTTATG
GCAGGGAAATATCCTGAATGAATGTAACAGTGGATAATTTGAGATTCATG
TGGGCAAAACCTAAATCAACAATGAGACCTTTCTATCATGAAAAATGAAA
TTTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAAAATGCCT
AAAAACTAAGAAACATCTAAGAAACATGCTGAGGCTGAGAATGAGAAAAT
AACATTTTTTAATTCGTTTTTTTTAAGAACCTTCCAATCAAAAGAAATTT
TTTTTCTTTGCATGAAATTAGGCTGATTATGTCAAAAAGTGTAGAAACAT
TTAAGGCTCAAAAGGCCGATTTTTTAAGAAACATTGAGGCTGCTTGGTAA
AACTAGTTTCTTAAAAAAAAGAATGTGTATATTTATTTTTTTTCCACAGA
AAGTGAAAGTTAATTGGGCAACAAATACAACAACAGGAGGACCTCCAAAA
GTTATTGGCAGTAAATATTTTTTAATTTATTAATGCATTTTATTTTCTGT
ATGCCACCTGACTGCTACTCTGTACCACAGTGTACCTGGCGTTTATCGCT
TCTTAGTACACTCTAGGTGCTCACTGTCTGTTTAATTAAAAATTCCTGTC
TAGAGACCTCTGCGATGAAGTATGATTTTAAAATAGCAACCACTTCTCTC
ATGGTCTCCCCTCTCTCACCAACACTCCATTGCAGCAGTCGGTTTGAAAA
ATCTCAAATGAGAAAAGACAATGACAACAGACCCTCTACGGCAATGAATT
TTGAAATAAGCCGTAGATACTGAGTTTGTGTACATACAACCTGACTGCCT
GTTATTTTCAGTGTTTAAAGTTCTTCCGTCTCAGACGGATTTCCGTCTTA
GCAAGGTGCAAAAAGAGGCTTTTCCGTCACCAAATTCAACAAAAATTCAG
CAAAACATGAAGAATCTGGCCAGATTTGTTGTTTAAAGTCTATTTCCGTC
TGTGATGAAAACTTTGCTTTGACCACTGTATTTTAAACTAAGTAGTGCTA
GAGTATAATTAAAATTTCATGTTGAAATCAAAATTGAAAAAAACTTTTAC
TTGTTTTACTTTTAGCAAGTGTCACAATATATGTTGGAAACTTGGATGAC
ACCATTGACGAGAATGACTTAAGAACTGCCTTTGAAGTCTTTGGAGAAAT
CATGTAAGTTTTTCTTTAACTCATTAGTTGTCACTTTTATTAATCCTTTT
TCCATCTTCATATTTTCTTGTTTTTATATCAATATCAATTTAAAACTTTC
AAATTTATTTTTTCATAAATTGCTAAATGATAATTTTATCATCTCATAAT
TATTGTAGATGGCTCCAACAAAAATGAAAACATCAAAGCAACCTGAATTG
CAAAAGAGTAAATCTCTATAGTTATTCTATTTGTCTCATTTTTTCTTTTT
TATTTCTTTTTCATTATTTCAATTTTTTGGTATTTCAGCATGCCTTTCTT
TTACTTAATTATTACTTTTTGTTATTTTAGTTTAGACTTCTTGTAAAAGT
GCATTTTGTTATTTTTAAGTTTAAATCCTTCTTTCAGAAATATCAAAGTT
GTCAGGGATCCAGTCACAAACAAAAGTAAAAACATAGGATTCATCTCTTA
CACAAACAAACCTGTGAGTACTTTCTATCTGTGAGTGTGAATCTATTTAT
ATTGTTTTTGTATTTCCCATGTGTTAAATTGTGACTCCTTCAGAAAAGAA
TCAACTTTTTAAAAAGGTCATAAAAAGATTCTTTGTATTTGCAGCTGAAG
TTTTAATCTCAACTTTTAATGATTTTTTGGTGCATGAAAGACAAGGTTAA
AATATCATGAATTTGCAAGGTGAAAAACGATTATTTTAGGATGCTGAAAA
AGCTATCAGAGACATGAACCAGGCTATGTTGAAAACAAGGAGCATCAAGA
CAAATTGGGCAACAAGAAATCAAAACCAAAAGCGAGGTATGTTTTTTGCT
TTTTTTAAAACTATTAACAATGGCTTGGAAACGACTCACAGAAAACATTA
AAGAATGAAATTTGTAATCAGCTTTGATTAGAAAGTTAAATTCTACATGA
TCCAGAGTGTCATTACTAAAATCTCAAAAAAAAAATCATAAAGTATTATG
GGTAACCAAATAGATGGCATGCAAAGGGAAAAAGCAACCTTCGAGTTAGA
ATACTTGAATTGGATTAACTTCCACAAAATTAAATTTTGCAAAGAAAATG
TGTGAGATTGCTGACTTGCAAGATTAAATCAACGTGAAATTAAAAAAACT
CTTTTTCAGTGGAGGAACCAGTCAAAACACTATTCATGCCAAAAAATGAA
AATTTTCAGCTTTTTTCAGGCTCGTTTTCTAGATTAAGTCTGCACAGAAT
TTTTCGAAACAATTAACTTGCAAAATTAAATCGAAAAAATTTCGTGATTT
CTTTATCCAATTAAAGTAATAGCAATTTTAGTCGAAGTCTTCATTCAACG
GTAGAATTTCATTTCCTTAAATTTTCAGCAAATAAAATGATTTTTTTTTT
CTTAAAATATTTCTCTCTGCAGAGGAGTTAGACTATGATGAAGTATTCCG
AGAAACAGAAACAACCAATTGCACGGTTTACGTTGGTGGGATCCCTGTTA
ATTGTCAAGGTATACAATGTCTGATTAATCTTCAGCAATCACTATATTTT
TCAAAGTAAACTACCTTTCTTTCTATAGTGTTATGTTCGTTTTATGGCCA
GGCCATGGCGTACAGAGTGCATTCGATTTGTTTTAAAGTCAATATGAAAA
ATTGTTAGCTCTTTGGAAAATTCTCGAAATTCTTCTGTCTGCAGTTTGCT
TTCATATTTTTATTATTTTCTAAATAGATGCACAAATCAGAAGACATTTT
GAAGATCATGGAAAAGTTACTGATGTTAGGATCTTTCCTGCCAAAAACTA
CGCATTTGTTAGGTAAATATTTTCTGCAAATCAAAAGGGTTACAGTCACA
AAATGATCGTTTTAGGTAAATTCCTAAGATATTTGCTTTCAAATGACTGA
AATGACTGACGATTTCAGGTGTAAAACTTTCTCTACCATGTTGAAATTCT
ATTTAGTCTGTTAAAAAAAAGTAGATAGTAAAATTTAAGCGGTTTTGATT
AAAGCCAAATCGACAGTATAAAAAGTGAGGTCTGGATCGCTGTAAAAAGT
GTTGAGCTTGCAAAAACAGTTTGTAAAACAATGATCAAAACAAATTTCTT
CGTCTTAGATTCGAATCACACGCTGCCGCAGCTACAGCAATCGTTAAAAC
GAACGGAAGTGATTTAATGGGATCAACCTTAAAGGTAATGCAAAACTTAT
CACTTTCTTTTGTCACAGCAGGCAAACAATGGCTAAAGCTATAGAACTTA
GATTTCTTTAAAAAGATCTCAAACTTTGCCTGAATCATTGCATTTTGTTG
TGAAGAAGCATTGAGTTTGGAATTAGATTTGGCCGGTCAAAAATGTTGTT
TAACAAGTGTTGTTTGGCACTTATTTGGTTCAATATCATGCAAAACTTAA
CTGAAAATCAACAGTTTTGCAAACAAAGAAATTCTCACCCTAAGAGAATT
TAAAGGGGAATTAACGTTTGGAATTAACCCTGAAATTTGTTTTCCAAACA
TTAAAGAGGAAGAAAAATGTGATCGAACAAAAAAGAACCACTTCAAAATG
TCTTTTATTCATTGAGTTATTAATCTTTAATTTCTCACAATTTTGACTCT
ACAATGGAGAAAAACTCCCCCTCTGTGTATTTTTTGACGTAAAGTGCACT
GCAACTATTCTCACTGTTACACTCTATGTAAAAGAGATATAAAACGTTAG
AAATGAATCTTTTTTAGAGTAATTATAGCAAAACGTCGAAGACATAAAAC
TAGGAGAATGTAGTTAGTATTCCAAAGGTGCAGTAAATTCACTGACGGTA
AAAAGAAACTCAAAAACTGCATATAAAAAAGAGAAACACAGTTCGCACCC
TATGTCACATTTTTCGTATCGATAGCAACACAAGGGAATTTTCAAAGAAC
TCTTATTGGGTTCTTCCAGAAAAAAATTGTAAATGGGGGGTGGAGGATAT
AACAATTTTTAGTGATTTACCCCCCGAACAGAGTGACTTTTGGCCCCCCA
GACAATAGGTTTTACACCCCGGACAATCATCTGTTGACCCCCCAGACAGA
GCAAATTTTGATTTTTTGCTACCCCCTGGACAAAATATCCTCCACCCCCC
ATGTACAATTTTTTTCTGGAAGAGCCCATTCCGGATGTAGAAGAGTAAAG
CCCTATAAACCATATATATTTGAAATCGTCTCAATGAGCTCTACAGTATT
TGAATCTGTCATTTGTTTGTTGACAAATTTGAAACATTAATTCCCCTTTA
AACTTGACTTTTTCTTAATAACAGTGTTGGTGGGGTAAAGAAGGACCCGA
AGGAGGTAGCAGCCGTCCACACAACAATTACAACAACTCTCACCATGGTG
GTGGATACAACAAAGATCACACACACGCCATGCAAAACATGACTCCTCAA
CAGCAACAACAATATATGCAACAATATATGGTGAGTGAAACAAATCCTCT
CAGATAGAACACCTCCCCCCTATTTTTAAGGGTTGACATCTAAAAAAAAC
TTTCCCTTTCTTCTTAAGGAAATGTTAGAATCCATATCCTCTTACTTTCT
AAAGTAACTTTCTTGTATCCGGCAGTCAAAACATTAAATTTCAAAGACTG
TGATGCCCAGATACACTATGAAGCCATATTTACTTTTCAATAGCCACTAT
TCTCTATTCTCTAAGAGCTCTTTTCACACAACAGATAATTGAACGAGAGT
AAAAATAATTTTCTCATTGTGTATCTATTCCAGCAGCAATACAATCCATA
CTACCAACAACAATATTATCAATACTGGATGCAACAATATCAATATCAAC
AACAGATGCAACAAAATGGCGGCGGTGCTGGGGGCAACCCTGCAGCCAGT
GGTGGTAACTATCAACAAAACGGTTACCAAGGTTACGGTCAACAAAGTGC
TGGAAGTAACCAAGGAGGCGATCACCAACAACAAAGTTATCAACAACAAA
ACTAA Coding sequence (CDS) from alignment at sc0000043_pilon:1396822..1402276- >XLOC_030407 ID=XLOC_030407|Name=XLOC_030407|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2250bp|location=Sequence derived from alignment at sc0000043_pilon:1396822..1402276- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATAAATATTCTCAAAACTGGACTTGGACATATTGAAAACAAAAT
TCTTGCATGCAATATGTTTCCTGGTGATATGATGATGATAAATATTCTCA
AAACTGGACTTGGACATATTGAAAACAAAATTCTTGCATGCAATATGTTT
CCTGGTGATATGAATAATCCAGATGGTTATTGCTTTGTCCAATTTGAAGA
TAACAATGCTGCTTGTCAAGCAATGACATTTTTGAATGGTCGTGATTTTT
GTGGAAAGAATAATCCAGATGGTTATTGCTTTGTCCAATTTGAAGATAAC
AATGCTGCTTGTCAAGCAATGACATTTTTGAATGGTCGTGATTTTTGTGG
AAAGAAAGTGAAAGTTAATTGGGCAACAAATACAACAACAGGAGGACCTC
CAAAAGTTATTGGCAAAAGTGAAAGTTAATTGGGCAACAAATACAACAAC
AGGAGGACCTCCAAAAGTTATTGGCACAAGTGTCACAATATATGTTGGAA
ACTTGGATGACACCATTGACGAGAATGACTTAAGAACTGCCTTTGAAGTC
TTTGGAGAAATCATCAAGTGTCACAATATATGTTGGAAACTTGGATGACA
CCATTGACGAGAATGACTTAAGAACTGCCTTTGAAGTCTTTGGAGAAATC
ATAAATATCAAAGTTGTCAGGGATCCAGTCACAAACAAAAGTAAAAACAT
AGGATTCATCTCTTACACAAACAAACCTAAATATCAAAGTTGTCAGGGAT
CCAGTCACAAACAAAAGTAAAAACATAGGATTCATCTCTTACACAAACAA
ACCTGATGCTGAAAAAGCTATCAGAGACATGAACCAGGCTATGTTGAAAA
CAAGGAGCATCAAGACAAATTGGGCAACAAGAAATCAAAACCAAAAGCGA
GGATGCTGAAAAAGCTATCAGAGACATGAACCAGGCTATGTTGAAAACAA
GGAGCATCAAGACAAATTGGGCAACAAGAAATCAAAACCAAAAGCGAGAG
GAGTTAGACTATGATGAAGTATTCCGAGAAACAGAAACAACCAATTGCAC
GGTTTACGTTGGTGGGATCCCTGTTAATTGTCAAGAGGAGTTAGACTATG
ATGAAGTATTCCGAGAAACAGAAACAACCAATTGCACGGTTTACGTTGGT
GGGATCCCTGTTAATTGTCAAGATGCACAAATCAGAAGACATTTTGAAGA
TCATGGAAAAGTTACTGATGTTAGGATCTTTCCTGCCAAAAACTACGCAT
TTGTTAGATGCACAAATCAGAAGACATTTTGAAGATCATGGAAAAGTTAC
TGATGTTAGGATCTTTCCTGCCAAAAACTACGCATTTGTTAGATTCGAAT
CACACGCTGCCGCAGCTACAGCAATCGTTAAAACGAACGGAAGTGATTTA
ATGGGATCAACCTTAAAGATTCGAATCACACGCTGCCGCAGCTACAGCAA
TCGTTAAAACGAACGGAAGTGATTTAATGGGATCAACCTTAAAGTGTTGG
TGGGGTAAAGAAGGACCCGAAGGAGGTAGCAGCCGTCCACACAACAATTA
CAACAACTCTCACCATGGTGGTGGATACAACAAAGATCACACACACGCCA
TGCAAAACATGACTCCTCAACAGCAACAACAATATATGCAACAATATATG
TGTTGGTGGGGTAAAGAAGGACCCGAAGGAGGTAGCAGCCGTCCACACAA
CAATTACAACAACTCTCACCATGGTGGTGGATACAACAAAGATCACACAC
ACGCCATGCAAAACATGACTCCTCAACAGCAACAACAATATATGCAACAA
TATATGCAGCAATACAATCCATACTACCAACAACAATATTATCAATACTG
GATGCAACAATATCAATATCAACAACAGATGCAACAAAATGGCGGCGGTG
CTGGGGGCAACCCTGCAGCCAGTGGTGGTAACTATCAACAAAACGGTTAC
CAAGGTTACGGTCAACAAAGTGCTGGAAGTAACCAAGGAGGCGATCACCA
ACAACAAAGTTATCAACAACAAAACTAACAGCAATACAATCCATACTACC
AACAACAATATTATCAATACTGGATGCAACAATATCAATATCAACAACAG
ATGCAACAAAATGGCGGCGGTGCTGGGGGCAACCCTGCAGCCAGTGGTGG
TAACTATCAACAAAACGGTTACCAAGGTTACGGTCAACAAAGTGCTGGAA
GTAACCAAGGAGGCGATCACCAACAACAAAGTTATCAACAACAAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1396822..1402276 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 904-1125:223 |
| Aaloc | 748-903:682 |
| Aaloc | 673-747:1847 |
| Aaloc | 589-669:2227 |
| Aaloc | 502-585:2532 |
| Aaloc | 403-498:3217 |
| Aaloc | 328-402:3518 |
| Aaloc | 241-324:3989 |
| Aaloc | 178-237:4657 |
| Aaloc | 82-177:5168 |
| Aaloc | 1-81:5456 |
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