XLOC_034623 (mRNA) -

Overview
NameXLOC_034623
Unique NameXLOC_034623
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000149_pilon:392814..396370-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034623 ID=XLOC_034623|Name=XLOC_034623|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3557bp|location=Sequence derived from alignment at sc0000149_pilon:392814..396370- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACCACTACTTTCGATACTGCAGAAATTCAAAAACATGCTAATGT CGTTATGAACTATACTGCTGAGCAGATTGAATGTGTTTGTGACGCTCTTA TACAAAGCCAGAATTATGACACCTTGGCCAAATTGTTGTGGTCGTTGCCT AGGAACGAGATGAACCATAGCAGCGAGTGTATATTGAAGAGCCGAGCTTA CGTTGCTTTACACCAAGGACGATTCAGAGACTTGTATACACTCTTAGAAA GCCATGATTTCGATCCTGACTTGCACCCAGTAATGCAGCAAATGTGGCAT GATGCACATTACCTAGAAGCAGAGAAAATCCGTGGACGACCGTTAGGCGC TGTTGAGAAATATCGAATCAGGCGCAAATACCCATTACCTAGAACCATTT GGGACGGTGAAGAGACAGTTTACTGTTTCAAGGAAAAGTCAAGACAGGTG TTAAAAGACTGGTATGATAAGAATAAGTACCCTACACCACAGGATAAACG TATTTTAGCTAAACGTACAGAGCTGACTTTGGTCCAAGTTTCAAATTGGT TCAAGAACAGACGACAGCGTGATAAACCGAACGGCGAAGGAGAAGAAGAG AAGATTGGGAGGTAGGTAATATATCATTTCAATCTCACCAGCACGTGCCA ATATTTTTCGTTTAGAATTTCTTCTTAAAAAATGTAAATTCGCTAAGTGC AGGTCAGCAGATGAGAAGAGGATTCTAGCTCACCTACCACTACTCCCTTG CAATTATGATAAAGCCAGTTGACCCTCTTAGAATTTTAACAATAAAATAA AAGCAGTTATTTTTAAGGGCCATGAGGATTGCCAAAGATCTGATCGAACC CAAAAAAACAGGGGTGTATTGTGGAACATTTAGAACCTTATTGGTTGCTT GAAAGCCACGAGGGAGGTTCTGATAATCAATTGTTTCAAAAGTTTACAAA AGAGACCACACCCTAATTGAGTTCTTTATGCAAATTTAAAAGTAACACAT GTTTTTAAAATTTCACTTCTGAGATATGATGAGTTTTCAATATGTATTAC TTTTTATTTGTCGAAGAGGATTAAGGCGAAAGTGATGGTTTTAAAGCTTC AAAGCCACAACCTCAATCTTGTTGATTTAACAAAAGTAATGTACGTTCTA ACATGAATAAGAGGCTGGTCTGGTATTTGCAATTCAAATAGAAGATGGAA TTCACCTTATGGCCTTGAAAGCAGGAGGATATGCTTAAAAGATATTAAAC TCTTTTTTATTACAGACCTTAAAAAGTTCATAAGTTCTACAAGGCCTGCC AGAGAAAGTGAAAGGCCATTGGAACTTTCGAAAGGTCATTTGGACCATCG CAACAACGCAACTTTTATTCATCTGGAAAAAAGGAGAGAATTAGCTTCTT TTTTTAAATCATGTACCCCAAGTTTTTATCTTATATAAGCCATCCCCAGA GTAAATTTCGACCTTTTTTTACCAAATTTCATCGGGATAATCATAGCAGT CAATTCAATGAGATAATTGATACAGGGGTTGATGTAATTGAAAATCAAAA CAGAGAAATCAACCATTACTACAATTTGATACAGGGATGAAAGTATAATC CCAGCTAATAACACACCCCCTTCTCACAGATCCACTGGGACCCCTTCCCA CTGGAAAAATTGGCCAAAATATCGTCCCCGGTGGAAAACTATCCTCCAAT TTTTATCCCCACTGAAAATGATCAAATAAACCAATCCTCACTGCAAAGTA TTATGCTATTTTTCCCATCCCCACTGAATTTTCTGACTTGAAAACACACG AATTATGAAATCCCCAGCCATAAAAAATATGGGAATATCAATCCCCGTCG AGTTTTAGTCCGTTATTTCTATCCCCATTGGCTTAAAAAACCCTACCGGG TCTGTGAGAAGGGGGTGTAATAATGAACTCGATAAGTTTTTAGATTAAAC AAATTTTTATCCGGTTTGTAGTATTTTGTGGGTATTTTGTCACAAAAACT AAATGAATTCGGTACGGGATTTAAAGGTCAATCAAAAATTGATAATTCAC GATTCCATCTAACTCAAGTTTGAATATATCTTTTCAACACCAATTAAATT ATAAAGTAAAAGTAAGTTCAAAACTAAAATGAATTTCCAAAGATTACAAG GGCTTTTAATCTCAAGATAAACATTTGGATTCATAAAATAAATATAACAT AGAACCGCCTCCGTTAATCCTCTAGTGCGATCATCAAAACGAGACAAATT TTGTTTAGAATACCTTCGTCCAATGTTTATTTTCTTGAGTAGGTATAAGC CACATTGCTATATTTTGATTGAAAACTTTTAATTTTGTCGAGAGGGCTTT AAAAATAAAGTAAGTAAGCACTTAAATAGAAAAACAAAACAAAGACCAAT GAGTCGCCATAAACAATATTATTAGACGGTCTTTCAGCTGTTTGTGCAGC AATATCATTTGCTACTGTAGTTATTGAATGAATTGAGTTAGTGCCAAGAC TTTTAATAATGACAGCCCCTCTGGGTGAATAATCTATCTTGCTTTTTATT TGTTTCTGATTTTGATTTGAACATTTGTTGGCTTTTTCTATTTCAGAGCG AATTATACTGTTTTGATAATTTTAATTAACGGTACTATACTTACCAATCC AGCCCAATTCGTCCAACCATAACATATTATAACATTTTGCCACAAAATTC TATTTCTCCGACCTCACAGAACTTTTCCTTACATTGTAAGCGTTTTGAGC ATAAGCAAAGATTACTTATAAGGTCTTAAAAACTAAGTAAGGGGAAATCC CCATCCCTGAGTAAAATTTCACACACTCCTGTGTCACAGACCCGCTGGAA CCCCAGCCCACTGGAAAATTTGGCCAAAATTTCGTCCTTGGTACTGAAAT TACCCCGAAATTTCAGCCACATTACATACATTACATGAATACATCCCCAT TCAAATTTCATTGTAAAAAATTGCACTCCAAAACCATCCCAACTTGATTT TTTAAGGTTTGAACAATAGAATCTCTATCACCATTGAGATAACCAAGGAA AATCTTATCCCCACTGTCTGAAAATGTTTTACCGGGGCTGTGAGACAGGG GTGTTTTCACGTACATTTCAAAAATGCTTTGAATGAGGATTTATGCTCCT TAAGGTTATTTGAGACAGGGGCATACAAGGCTTTTGCTCATCCTATAGCG AAAAAAGGAGATATATCTATAGAGGTTTGCGAATCAAACTAGGGCACATA GACTAATAATTCATGCTTATGCCGATTCGCTAATTAACAACTTCTTGTTT CTGTTATAATTTATAGATCCATCAGTGTGGAGCCATGGTCAACCTCATTG AACGTTCCCTACCTTAACAACAACAATACCACCACAAACAACAACAATAA CAATTTACCCAACAACAATTATCTCATGTCCACTACAAAAGACAATCTGA AAAATTCCAAAACGAATGTTGGTTATCCAGATACGGTTTCTGTACATCCA CACGATGCAGTCAAACAATCACCGTCATATTTCGCTGACATAAGTTGCTC GATGTAA

Coding sequence (CDS) from alignment at sc0000149_pilon:392814..396370-

>XLOC_034623 ID=XLOC_034623|Name=XLOC_034623|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000149_pilon:392814..396370- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACCACTACTTTCGATACTGCAGAAATTCAAAAACATGCTAATGT
CGTTATGAACTATACTGCTGAGCAGATTGAATGTGTTTGTGACGCTCTTA
TACAAAGCCAGAATTATGACACCTTGGCCAAATTGTTGTGGTCGTTGCCT
AGGAACGAGATGAACCATAGCAGCGAGTGTATATTGAAGAGCCGAGCTTA
CGTTGCTTTACACCAAGGACGATTCAGAGACTTGTATACACTCTTAGAAA
GCCATGATTTCGATCCTGACTTGCACCCAGTAATGCAGCAAATGTGGCAT
GATGCACATTACCTAGAAGCAGAGAAAATCCGTGGACGACCGTTAGGCGC
TGTTGAGAAATATCGAATCAGGCGCAAATACCCATTACCTAGAACCATTT
GGGACGGTGAAGAGACAGTTTACTGTTTCAAGGAAAAGTCAAGACAGGTG
TTAAAAGACTGGTATGATAAGAATAAGTACCCTACACCACAGGATAAACG
TATTTTAGCTAAACGTACAGAGCTGACTTTGGTCCAAGTTTCAAATTGGT
TCAAGAACAGACGACAGCGTGATAAACCGAACGGCGAAGGAGAAGAAGAG
AAGATTGGGAGATGAGTACCACTACTTTCGATACTGCAGAAATTCAAAAA
CATGCTAATGTCGTTATGAACTATACTGCTGAGCAGATTGAATGTGTTTG
TGACGCTCTTATACAAAGCCAGAATTATGACACCTTGGCCAAATTGTTGT
GGTCGTTGCCTAGGAACGAGATGAACCATAGCAGCGAGTGTATATTGAAG
AGCCGAGCTTACGTTGCTTTACACCAAGGACGATTCAGAGACTTGTATAC
ACTCTTAGAAAGCCATGATTTCGATCCTGACTTGCACCCAGTAATGCAGC
AAATGTGGCATGATGCACATTACCTAGAAGCAGAGAAAATCCGTGGACGA
CCGTTAGGCGCTGTTGAGAAATATCGAATCAGGCGCAAATACCCATTACC
TAGAACCATTTGGGACGGTGAAGAGACAGTTTACTGTTTCAAGGAAAAGT
CAAGACAGGTGTTAAAAGACTGGTATGATAAGAATAAGTACCCTACACCA
CAGGATAAACGTATTTTAGCTAAACGTACAGAGCTGACTTTGGTCCAAGT
TTCAAATTGGTTCAAGAACAGACGACAGCGTGATAAACCGAACGGCGAAG
GAGAAGAAGAGAAGATTGGGAGATCCATCAGTGTGGAGCCATGGTCAACC
TCATTGAACGTTCCCTACCTTAACAACAACAATACCACCACAAACAACAA
CAATAACAATTTACCCAACAACAATTATCTCATGTCCACTACAAAAGACA
ATCTGAAAAATTCCAAAACGAATGTTGGTTATCCAGATACGGTTTCTGTA
CATCCACACGATGCAGTCAAACAATCACCGTCATATTTCGCTGACATAAG
TTGCTCGATGTAAATCCATCAGTGTGGAGCCATGGTCAACCTCATTGAAC
GTTCCCTACCTTAACAACAACAATACCACCACAAACAACAACAATAACAA
TTTACCCAACAACAATTATCTCATGTCCACTACAAAAGACAATCTGAAAA
ATTCCAAAACGAATGTTGGTTATCCAGATACGGTTTCTGTACATCCACAC
GATGCAGTCAAACAATCACCGTCATATTTCGCTGACATAAGTTGCTCGAT
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_034623XLOC_034623-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000149_pilongenomesc0000149_pilon:392814..396370 -
Properties
Property NameValue
Aaloc613-852:241
Aaloc1-609:3558