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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000093_pilon:1261094..1262725- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043648 ID=XLOC_043648|Name=XLOC_043648|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1632bp|location=Sequence derived from alignment at sc0000093_pilon:1261094..1262725- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGTTTCAGAGGGGAAAACGAAAACGAAAATGAAAAACAATGATAAGGA
TGGTAAAAAGGAAAATACTGAAGAACAAAATGGAATGAGTCTTAATGACA
AGATCATTATTGTTAAAATGGAGGAGCCTGATGTGAATGATGAAACATTG
ACCCATAATGCTTTGCAAACTATTCTACCTTCATCTGATGGTTTGTAGAC
TTTCATGTTTTAAGGTCTTGTTTGTTTGTTCATAACGAGGCCCCTAGTAG
ATTGGGCCTTTTTTTAGCGTGATGGTGTGAAACTACGATTTTACAAAACT
CATGTGTGACTTATAATGGCAATAAAGTAACATTAGCTTTAAAATATCTT
TGTGTACCAATGAGGTAACTCAATCCTAAATTTTATTTCATTCTCAGGTT
CATTGTTTGATGAAATTATCGTCAAAATTGAAGAAGAGGAAGCAAACGAA
ATAAACCTTCAAAGTAATGACGTTCACGAAAACTTAATTTATTCTCGCAG
TGTGGCTGCTCAAGGAAACGATATTATCACAGTGCAATATCCAACAACTC
GAGCTTCTCGACCTGTTATCCGAACCGAAGCTGAGGAGAAACCTTACCAA
TGTGAAACATGTCTCAAACGTTTCGCTTATCATTGGCATTGGCAAAGACA
TCTTCGTTCTCATAATGGGGAAAAACCATTTAAGTGTGATTTTTGTGAGA
AAGGATTTGCAGATTCAAGCACCTTGACAAAACATAGACGACAGCATACT
GGGGAAAAACCCTTTGCATGTCAGGTTTGTGGAAAAATGTTTGCGCAATC
AAGCAATCTTAATAAACATCTTCGAGTTCACAGTAAAAGTGAAAAACATT
CCGAATTAAAACCATACAAATGTGATCTTGGTGACAAAAATTTTCCAAAT
ATTAGCAACATAAAAACTCACGAACGTACTTGCCTTGGAGAAAACCCGTA
CAAATGCAATGTATGTGGGCAATCTTTTGCGCAACAAGATGAACTACTTA
ACCACGTTCGTACTACTCATTTTATTGCAACGTCATCTTTGAATGGTGAA
TTTCTTGAAACGCCGACTGAAACTTCTCAGACCCTTTCCATTGAAAAACG
ATACGAGTGTAATGTTTGTGGGAAATTCCTAGCAGACGACAAAAATTTGC
GTCTGCATCTACGTATCCATTCTGGTGAAAAACCATACGCATGTCAAGTA
TGCAGTAAAAGGTTTACACAATGGAACGGTCTACAATCGCATCTTCGCAC
TCATGATGGTTTAAAACCGTATAATTGCGATGTTTGTGGAAAAGACTTCA
GCACTTCTAGTAACTACAAGAGACATTGTTTAATTCACATAGGTGCAAAA
CTTTACAGCTGTGAAGTATGTGGTAATGCGTTTACAAATTCTGGTAATTT
GAAAGTTCATATGCGAATGCATACAGGAGAAAGACCCTACTCTTGTGAAA
TATGTGGGAAATCATTTCGGCAAATAAGTGGCTTGCAATCACATCTTCGA
ACTCATTCTGGTGAAAAACCATTTAAGTGTGATGTTTGTGGTAGATCGTT
TGCAGACTCAAGTAACATGCGTCAACATCGTAATTTGCATTCATTATCAT
CTTCTAATAAAAATTATATTACAATGATGTAA Coding sequence (CDS) from alignment at sc0000093_pilon:1261094..1262725- >XLOC_043648 ID=XLOC_043648|Name=XLOC_043648|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2850bp|location=Sequence derived from alignment at sc0000093_pilon:1261094..1262725- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGTTTCAGAGGGGAAAACGAAAACGAAAATGAAAAACAATGATAAGGA
TGGTAAAAAGGAAAATACTGAAGAACAAAATGGAATGAGTCTTAATGACA
AGATCATTATTGTTAAAATGGAGGAGCCTGATGTGAATGATGAAACATTG
ACCCATAATGCTTTGCAAACTATTCTACCTTCATCTGATGTTAGTTTCAG
AGGGGAAAACGAAAACGAAAATGAAAAACAATGATAAGGATGGTAAAAAG
GAAAATACTGAAGAACAAAATGGAATGAGTCTTAATGACAAGATCATTAT
TGTTAAAATGGAGGAGCCTGATGTGAATGATGAAACATTGACCCATAATG
CTTTGCAAACTATTCTACCTTCATCTGATGGTTCATTGTTTGATGAAATT
ATCGTCAAAATTGAAGAAGAGGAAGCAAACGAAATAAACCTTCAAAGTAA
TGACGTTCACGAAAACTTAATTTATTCTCGCAGTGTGGCTGCTCAAGGAA
ACGATATTATCACAGTGCAATATCCAACAACTCGAGCTTCTCGACCTGTT
ATCCGAACCGAAGCTGAGGAGAAACCTTACCAATGTGAAACATGTCTCAA
ACGTTTCGCTTATCATTGGCATTGGCAAAGACATCTTCGTTCTCATAATG
GGGAAAAACCATTTAAGTGTGATTTTTGTGAGAAAGGATTTGCAGATTCA
AGCACCTTGACAAAACATAGACGACAGCATACTGGGGAAAAACCCTTTGC
ATGTCAGGTTTGTGGAAAAATGTTTGCGCAATCAAGCAATCTTAATAAAC
ATCTTCGAGTTCACAGTAAAAGTGAAAAACATTCCGAATTAAAACCATAC
AAATGTGATCTTGGTGACAAAAATTTTCCAAATATTAGCAACATAAAAAC
TCACGAACGTACTTGCCTTGGAGAAAACCCGTACAAATGCAATGTATGTG
GGCAATCTTTTGCGCAACAAGATGAACTACTTAACCACGTTCGTACTACT
CATTTTATTGCAACGTCATCTTTGAATGGTGAATTTCTTGAAACGCCGAC
TGAAACTTCTCAGACCCTTTCCATTGAAAAACGATACGAGTGTAATGTTT
GTGGGAAATTCCTAGCAGACGACAAAAATTTGCGTCTGCATCTACGTATC
CATTCTGGTGAAAAACCATACGCATGTCAAGTATGCAGTAAAAGGTTTAC
ACAATGGAACGGTCTACAATCGCATCTTCGCACTCATGATGGTTTAAAAC
CGTATAATTGCGATGTTTGTGGAAAAGACTTCAGCACTTCTAGTAACTAC
AAGAGACATTGTTTAATTCACATAGGTGCAAAACTTTACAGCTGTGAAGT
ATGTGGTAATGCGTTTACAAATTCTGGTAATTTGAAAGTTCATATGCGAA
TGCATACAGGAGAAAGACCCTACTCTTGTGAAATATGTGGGAAATCATTT
CGGCAAATAAGTGGCTTGCAATCACATCTTCGAACTCATTCTGGTGAAAA
ACCATTTAAGTGTGATGTTTGTGGTAGATCGTTTGCAGACTCAAGTAACA
TGCGTCAACATCGTAATTTGCATTCATTATCATCTTCTAATAAAAATTAT
ATTACAATGATGTAAGTTCATTGTTTGATGAAATTATCGTCAAAATTGAA
GAAGAGGAAGCAAACGAAATAAACCTTCAAAGTAATGACGTTCACGAAAA
CTTAATTTATTCTCGCAGTGTGGCTGCTCAAGGAAACGATATTATCACAG
TGCAATATCCAACAACTCGAGCTTCTCGACCTGTTATCCGAACCGAAGCT
GAGGAGAAACCTTACCAATGTGAAACATGTCTCAAACGTTTCGCTTATCA
TTGGCATTGGCAAAGACATCTTCGTTCTCATAATGGGGAAAAACCATTTA
AGTGTGATTTTTGTGAGAAAGGATTTGCAGATTCAAGCACCTTGACAAAA
CATAGACGACAGCATACTGGGGAAAAACCCTTTGCATGTCAGGTTTGTGG
AAAAATGTTTGCGCAATCAAGCAATCTTAATAAACATCTTCGAGTTCACA
GTAAAAGTGAAAAACATTCCGAATTAAAACCATACAAATGTGATCTTGGT
GACAAAAATTTTCCAAATATTAGCAACATAAAAACTCACGAACGTACTTG
CCTTGGAGAAAACCCGTACAAATGCAATGTATGTGGGCAATCTTTTGCGC
AACAAGATGAACTACTTAACCACGTTCGTACTACTCATTTTATTGCAACG
TCATCTTTGAATGGTGAATTTCTTGAAACGCCGACTGAAACTTCTCAGAC
CCTTTCCATTGAAAAACGATACGAGTGTAATGTTTGTGGGAAATTCCTAG
CAGACGACAAAAATTTGCGTCTGCATCTACGTATCCATTCTGGTGAAAAA
CCATACGCATGTCAAGTATGCAGTAAAAGGTTTACACAATGGAACGGTCT
ACAATCGCATCTTCGCACTCATGATGGTTTAAAACCGTATAATTGCGATG
TTTGTGGAAAAGACTTCAGCACTTCTAGTAACTACAAGAGACATTGTTTA
ATTCACATAGGTGCAAAACTTTACAGCTGTGAAGTATGTGGTAATGCGTT
TACAAATTCTGGTAATTTGAAAGTTCATATGCGAATGCATACAGGAGAAA
GACCCTACTCTTGTGAAATATGTGGGAAATCATTTCGGCAAATAAGTGGC
TTGCAATCACATCTTCGAACTCATTCTGGTGAAAAACCATTTAAGTGTGA
TGTTTGTGGTAGATCGTTTGCAGACTCAAGTAACATGCGTCAACATCGTA
ATTTGCATTCATTATCATCTTCTAATAAAAATTATATTACAATGATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093_pilon | genome | sc0000093_pilon:1261094..1262725 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 193-1425:1234 |
| Aaloc | 1-189:1633 |
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