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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000035_pilon:1369942..1373621- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045766 ID=XLOC_045766|Name=XLOC_045766|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3680bp|location=Sequence derived from alignment at sc0000035_pilon:1369942..1373621- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGAAAATACATAAAGATGAAGAAAATAAAAACCATATTAGCGCTGTT
TTCAATCTTGACATGTCATTGGTTAATTACTCCAGTCCACAGTTCAGAAC
TTAAGCAACACCAAGTGGAACATAACCAAGCAAAAAGACAACATCAAGTT
CAACAGCAAGCACATTATAACCAGAAATATCAACAACAGCACTTTAACTA
CAAGAATCAGGTAAGGTTTAGACCCAATATCAATTGAATGCAGGGTTGCT
ACCGGTTTGCAAAGTTGAAAATTCCAGACTCAAAAAACGCAAGTAAAAAG
GGTGAATTTCAATTTATTTTGGTCACGTGATCAATATCGATCGATAATCT
ACACCTACAGTCGTTTAGCTGGGTGGCGTCACGTTTTCCTTCAACTCCAA
CGAGTACTGACCACTATCTGACGCGTATTTTGATCATTTGATCAAAAACG
ATAGGTGAATATTTATCAACCTCGAAAAGTTCAACCAGAAGTAGACTTTA
GTTTATTTCGAGCTTGCTTGGATTTATACGAAGAAATTGAGGAAATTTGG
GTTGACACTAAGGAAATTTGGGCTGACACTAAGGAAATAACTAAACACTC
ATAAATAATGCTTATGACACAACCCTTCAGATATTCTTAACTTTTCGAGT
TAAATCAGGCGTTTCAAAGTCAAATAGGCCTTAAAATGTTCTTAACTTGT
TCTTAATATTTTTGCTAACCAAAGCCTATGTTTGTTCCTATTTTTTTAAT
GTTTTTTTTTTCTTTCCCTAGATAGAAAACCAAAGACGACAACAGCAAAA
AACATCAACGTACCGACAGCCTGTGTACCAACATAAAAAGAGACCAGTCT
ATCATTATAAGAAACAACCTGTCTATCACAACAAGAAAACATATCACTAT
AAAAAGAAGTGAGTACAACCTCGTTCCCTGTATAGTATCGGCTTTTTGAT
GTTCATTGATAGCGATTAAGTCCATTGGCCCCCCCTGTTAAGTATACCGG
ATATCCAGGGTGTTAACGATTTTTGATCAAAAGTGGATATCTAGGGAGTT
AAATATCTACAAGGGAGCGGATATCCAGGGGGTAAAGTGTCTTTTCATAT
AAAAAATACGATATCCAGGGAGTAAGCATCATTATAAGAGAGGATATCCA
GGGAGTTGAGCACATTTTTAAGAGTGGATACCCAGGGGGGTCTTTACTAA
TAAAGTAGGATATCCAGGGGGTTCGATACTTCGAAAAATCAATATCCTTA
ACAGTGGCGGTAAAATTTCTTTCTGGAAAAGTCCATTAGTAACGAAGACG
AACCCTGGTGCACACGGGATCGAGGTTGGTAAAAATGCTTTGATTAACTT
GGATAAGGACAGATGGTCCAATTGACAGAACCGTCAGTGTTACAATCCTA
CTCCTCCAAATATTTCGTCCAGTTGATATAGCCGAGCCGGCTGGCCGTGA
GTCCCATTAAATGATCGAAGGAGTAAAAGTTCTACCTAACATCAAACGGT
GCTAGGAAAAATAAATCTAGTGATCTCAATGTATTACACCGCTATTGAGT
ATATTGAATGTTGGGACATTAGATTAGGGTATCACTTTAGAAAAACTCTA
ATCAAAAGATCTTAACTGCTAGCCAGGTTGAGAACTTAGTGCAATCTCGT
ACCCGGAGCCACTTGTACCACGTTTTGATTTTAATAATGGACGTAAATAC
AATGGTTCGTGCATGCTATCCAAATCATCAAAAAGCAAAAAAAGGACTGG
ATTCGAGTTCGAGCTCAGTGGTGCCGATAGATAAACAGACGACACAGGGC
AAAGTACAATTTCTAAATCTCACGTTTCTTTTCTGTAGGTACAAGTACAT
CAAATGGCCACGCATTCGAGGGCGTTGCAAATACTCGCCCTGGACCGTTG
ATGGCGTTAACCCTGTTTTAGATGAAGCCGACAAAGGGAATATGGTTTTG
TTGTTCATGTTGAAAGTTGGAGACCCGTTCTCATATAACCAGCTAGGAAG
ATTGAATGATTTAGCTGAACATTACCTGTAAGGTCTTTTCGAATAATTTT
AAGTTTTTTTGCAGTGTTTTACCATATTTTGATACCCATAACAATCCAAA
TCTTCCGTCACCGATTAAACGCGCCAATACGACAAAAACTTGACCAGTCA
CCTTGGTTCGTCCCTCGAATAGATCGGCAATCTTAGTTTTTAGCGGAAAT
GTTTTAATTTGATTATCAAGGGAACTTTGGGATTGTTATGGGTAAGGTAT
ATAGTAAAAGCCCCTTTGGTAAACTAGCGTTAGTTCACAAGGTTAAAAAA
GGTTAAGGGTTTTGAAGGGCGCTCTTTCCAAAGGTTTGGGCACTATGAAT
GAATTCCGATTGGAAAATCCATACTTTTATCTTTATATCATATGGAACTT
GGTTTGTTTTGAAAGTCATCCAATATTTTTGCATATTACACCCCCTTCTC
ATAGACCCACTGGGACCCCCTCCTACTGAAAGAATTGGCCAAAATATCGT
CCCCGGTGGAAAATTATCCTCTTATTTTTGTCCCAACTGAAAAAAATCAA
ATAAACCAATTCCATGCTATTTTCCCATCCTCACTAATTTTCTGTCTTGA
AACAATGAACAATTGAAATCCCCAGCCATAAAAACATGGGAATATCGATC
CCCATCGACTTCCCACAGTCCGTTATTTTTACGAGAAGGATGTGTCACAA
TTGTCATATTGGATTCAACTTGGAATATCTGTTACCACCATTTACCTTAC
AGCGATATTGGCAGAAAGATTACAGTTATGGCTTTGGCTCATCGACGACG
CACAATCCCTGCGAGTTACCGTGAACGATTCCCGTTGGTTCAATTCCATC
AAGAACCGAAATCCAAAAATATATACAACCAAATCCGGGCTAAATATCGA
TTTAACATCATTTATGATAAATGCGGACGTCAACAGTACCACTTCGGGCC
ACCGTATAGTTGGCTAGGTTACGACATTACAAGGTGAGGCTATGGAGATA
ACATTCTTAACGTTTAGTTTTACGATAATGCGATAAGGCGGGATTTCGGG
AATGCGGGACCACCGTATAGTTGGCTAGTTTATGATGTCAAAAGGTTAGG
CTATGGCGGTAGCTTTCTTTAAAAAACTTCAAAAAGCGTCAACAATACCA
TTTCGGGCCACCGTATAGTTGGCTAGGTTACGATATCACGAGGTAAGGCT
ATGACAGTAGAACTCTTAATAAACACTCAATTCTACGTTAATCTGAGCGT
TTAACCCCTGGTCAAGCATCAAAACGACCCCCTGGTCAAGCATCAAAGCA
ACCCCCTGGACACTAAAATTTACCCCTGGACATAGCAGTTTTTCAAAAAT
TTTTCGATACCCCTGGACAGTATATCTTCCACTCCCTATGAACCGTTTTT
TTCTGGAAGAACCCATTTACACCAAACGGATGACAGAAAACAAAACAAAT
TTGTTTTCTCTTATCTTTTTAGGCTTGCCATTGAAAATGTCCGAAGATTT
CATACAGACTACAACTTGTGTGGGAAATGTAGAGCAAGACCTTTAACAAC
AGTTGGCCCAACCAACGCCCTGAATTCGACCGCCACTGCCCCACCCTCTA
CTAAGCCACCCACTAAGGCGACAGAATCAGCAGTTGATGGACCGTACACA
AATATCCCGGTTGCCGTCAAAAAAGCATGA Coding sequence (CDS) from alignment at sc0000035_pilon:1369942..1373621- >XLOC_045766 ID=XLOC_045766|Name=XLOC_045766|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000035_pilon:1369942..1373621- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGAAAATACATAAAGATGAAGAAAATAAAAACCATATTAGCGCTGTT
TTCAATCTTGACATGTCATTGGTTAATTACTCCAGTCCACAGTTCAGAAC
TTAAGCAACACCAAGTGGAACATAACCAAGCAAAAAGACAACATCAAGTT
CAACAGCAAGCACATTATAACCAGAAATATCAACAACAGCACTTTAACTA
CAAGAATCAGTTTAGAAAATACATAAAGATGAAGAAAATAAAAACCATAT
TAGCGCTGTTTTCAATCTTGACATGTCATTGGTTAATTACTCCAGTCCAC
AGTTCAGAACTTAAGCAACACCAAGTGGAACATAACCAAGCAAAAAGACA
ACATCAAGTTCAACAGCAAGCACATTATAACCAGAAATATCAACAACAGC
ACTTTAACTACAAGAATCAGATAGAAAACCAAAGACGACAACAGCAAAAA
ACATCAACGTACCGACAGCCTGTGTACCAACATAAAAAGAGACCAGTCTA
TCATTATAAGAAACAACCTGTCTATCACAACAAGAAAACATATCACTATA
AAAAGAAATAGAAAACCAAAGACGACAACAGCAAAAAACATCAACGTACC
GACAGCCTGTGTACCAACATAAAAAGAGACCAGTCTATCATTATAAGAAA
CAACCTGTCTATCACAACAAGAAAACATATCACTATAAAAAGAAGTACAA
GTACATCAAATGGCCACGCATTCGAGGGCGTTGCAAATACTCGCCCTGGA
CCGTTGATGGCGTTAACCCTGTTTTAGATGAAGCCGACAAAGGGAATATG
GTTTTGTTGTTCATGTTGAAAGTTGGAGACCCGTTCTCATATAACCAGCT
AGGAAGATTGAATGATTTAGCTGAACATTACCTGTACAAGTACATCAAAT
GGCCACGCATTCGAGGGCGTTGCAAATACTCGCCCTGGACCGTTGATGGC
GTTAACCCTGTTTTAGATGAAGCCGACAAAGGGAATATGGTTTTGTTGTT
CATGTTGAAAGTTGGAGACCCGTTCTCATATAACCAGCTAGGAAGATTGA
ATGATTTAGCTGAACATTACCTCGATATTGGCAGAAAGATTACAGTTATG
GCTTTGGCTCATCGACGACGCACAATCCCTGCGAGTTACCGTGAACGATT
CCCGTTGGTTCAATTCCATCAAGAACCGAAATCCAAAAATATATACAACC
AAATCCGGGCTAAATATCGATTTAACATCATTTATGATAAATGCGGACGT
CAACAGTACCACTTCGGGCCACCGTATAGTTGGCTAGGTTACGACATTAC
AAGCGATATTGGCAGAAAGATTACAGTTATGGCTTTGGCTCATCGACGAC
GCACAATCCCTGCGAGTTACCGTGAACGATTCCCGTTGGTTCAATTCCAT
CAAGAACCGAAATCCAAAAATATATACAACCAAATCCGGGCTAAATATCG
ATTTAACATCATTTATGATAAATGCGGACGTCAACAGTACCACTTCGGGC
CACCGTATAGTTGGCTAGGTTACGACATTACAAGGCTTGCCATTGAAAAT
GTCCGAAGATTTCATACAGACTACAACTTGTGTGGGAAATGTAGAGCAAG
ACCTTTAACAACAGTTGGCCCAACCAACGCCCTGAATTCGACCGCCACTG
CCCCACCCTCTACTAAGCCACCCACTAAGGCGACAGAATCAGCAGTTGAT
GGACCGTACACAAATATCCCGGTTGCCGTCAAAAAAGCATGAGCTTGCCA
TTGAAAATGTCCGAAGATTTCATACAGACTACAACTTGTGTGGGAAATGT
AGAGCAAGACCTTTAACAACAGTTGGCCCAACCAACGCCCTGAATTCGAC
CGCCACTGCCCCACCCTCTACTAAGCCACCCACTAAGGCGACAGAATCAG
CAGTTGATGGACCGTACACAAATATCCCGGTTGCCGTCAAAAAAGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000035_pilon | genome | sc0000035_pilon:1369942..1373621 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-975:208 |
| Aaloc | 538-765:928 |
| Aaloc | 349-534:1842 |
| Aaloc | 211-345:2910 |
| Aaloc | 1-210:3681 |
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