TCONS_00015654 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015654
Unique NameTCONS_00015654
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2477

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015654 ID=TCONS_00015654|Name=TCONS_00015654|organism=Clytia hemisphaerica|type=transcript|length=2477bp
TCATCAATAATCATTATTATTTCAGAAAGTTATACCCTCCCCTTATTAAA
GGCAGGTTTTAAGTAAAATCTCTTGGAATTTACTTagaattttaaagata
ttttgcaTCAAAACACTTACATAAAAGGATGGAATTTACAGAGGAGGAAG
TTAGAGAGAAGTTGAAAGAGTTGGGCTATGTCAATGTTCCACGAAGCAAG
TTACAAGAATTCATGCAAGATTTACAAGACCTTGTCGAATATGATCAATC
AATGAGTGGTGATTCTTCTGCACCTTCCAGAGATCAATACGACTCCATCC
CAGATGATTATTCAACAGATGATCAACTAGATGACTCCTACTTCCAAAGG
TCGACAGCCTCTTCAGTACCAGCTCCACTACACGATGTCACTAATGGTAC
CAATAGATCAAGAAGTGCCTTCTCTAAAGAAAAGATTTCATCACGCAGAC
AACGTCATCAGGTGGCGGAAGAGAAAGAAAATCCCACCCATTACGATACG
TCATCAATGACCAGCGTTTCTCCCAATCACGAAGATTCTTCTAAAATTCG
TAGGAAGGTGGCCAGGAAATGCGAAGGACAGACGCGTGTTTTTGACGAAA
CTTTCACGGATAGTGACGTAACGGATATCACACTTCTTGAAGACAGGATC
AAGAACCTTCCATACCATCAACAACAACATCAAGACCACCGACATCTTCA
ACGAGCACCTTCAGATACTTCAAATATGTCTACTACTTCAACTCAAGCAT
CCTCTTTACCTGCGTTCATACGTACTTCCAAAAGTCACCCGCATACTAAA
GGGATCAAGAAAAATGACCCAGTCAACAGATATCATCAGTTCAAAACAGG
ATGGGAGCAAAATAAAATGCCCGGTGAAGCGAAACATTCCAAGTTGCGAT
GGCAAGTTCGAGAACAAATGCTGACTTATGAAGCCTTTGAGAAACCAAGA
CATAGGCCGATGGTCAATAACTACGTTGTTCCTACCGACAAGAAGCGACA
ATCTTTGAGATGGCAAGTCCGCACTGCTATGGCTAACACCTGAGATGTTT
GTAGCGTGGTTTAGTTTCCTATGATGTGAAGGGAAAGTTAGAATTACTAT
ACTGATTATCAACATACACGCTTGGATGTGGTCTTTAATCAGATTGAATG
ACTTTTAGACTAGAGTTGGCGAATGAATGAACATagaaaaaaatacaaac
tcgaaaacaaaaacagaatGCTACAGAGGATTTTGGTGTTAAATGCTGGC
TCATCTTCACTGAAGTATGCGTTATACACAGCTCTTGATAAACAAATACA
AgctgtttcggcttccggtataATCGAACAGATCGGACAACCTAACCAGA
AGATAAAACACAAATTCCAAGTAGGTGATACAAAAGAGAAAATCAATCTC
CCTTTCTcagagaaagatttgaattataaCGGTGCTTTAAAATCGTGTTT
GAATTTGCTTCGTGAGACGGTTCCCCATGATGACGGTGGTCATTTTATTC
ATGGTGTTGGCCATCGAGTCGTTCACGGTGGTGAAACACTGTCCCAACCT
GAAATTGTAAACACTAGTGTTATTGAGGCTATTAAAAAGGCTTCATCACT
AGCCCCACTTCACAATCCAGCGAATTTACTAGGTATTGAAACAGCAATGG
AAAGTCTCCCAACTGATTGCAAACATGTGGCGGTCTTCGATACCGCCTTT
CATTCCACCCTAGCACCTCATGTCTACCATTATGCAATACCTATGGAATA
TTACCATAATCACGGCATCCGAAAATATGGTTTCCATGGCACCAGTCATG
AGTACATACTTGAAGAATCTGCGAAATTCTTGAATAAAAGAGTTGATACA
ATGAATATGATTTCGTGTCATTTGGGAGCTGGGGCGAGTGTCTGTTGTAT
TAAAAATGGTGAGTCAATTGATGTTTCTATGGGTTTGACTCCAATGGAGG
GATTAGTTATGGCCACAAGATCTGGTGATATTGATCCTAGTGCTCTCTTC
CACATGATGAGAGAACTGGGTATGAGCAAAGATGAAGTTGAAGAATTAAT
CATCAAGAAAAGTGGATGGTATGGGTTGAGCGGAGAAATAGACGCCCGCG
AGATCGAGCGACGTGCTGATAACGGAGAAGATCAGTTCGAGCTGACGCAG
AAAATTATGGTGCACCGTATCCGTAAATACATTGGTGCATACATGATCAA
TTTATGTGGCAAGATGGATGCGCTGGTTTTTACGGCGGGTTTAGGTGAGA
ATTGGCCGTCCCTTCGTGAATTATGTTTGCATAATATGGAGAGGTTTGGT
ATGGAGTTggataaggagaaaaacaaaaacatgattCTACCCGACCGTTG
TAATGATGTTTCCACCTTTTTCTCACAAATTCGTATTTTTGTCATTCCGA
CTGATGAGGAAAAGCAGATCGCTCGGCAAACGGTGCAATTGATCAATCAA
GATTGATAGGAGTTAGCTGTAGGTAAT
Run BLAST on NCBI

protein sequence of TCONS_00015654-protein

>TCONS_00015654-protein ID=TCONS_00015654-protein|Name=TCONS_00015654-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
MNEHRKKYKLENKNRMLQRILVLNAGSSSLKYALYTALDKQIQAVSASGI
IEQIGQPNQKIKHKFQVGDTKEKINLPFSEKDLNYNGALKSCLNLLRETV
PHDDGGHFIHGVGHRVVHGGETLSQPEIVNTSVIEAIKKASSLAPLHNPA
NLLGIETAMESLPTDCKHVAVFDTAFHSTLAPHVYHYAIPMEYYHNHGIR
KYGFHGTSHEYILEESAKFLNKRVDTMNMISCHLGAGASVCCIKNGESID
VSMGLTPMEGLVMATRSGDIDPSALFHMMRELGMSKDEVEELIIKKSGWY
GLSGEIDAREIERRADNGEDQFELTQKIMVHRIRKYIGAYMINLCGKMDA
LVFTAGLGENWPSLRELCLHNMERFGMELDKEKNKNMILPDRCNDVSTFF
SQIRIFVIPTDEEKQIARQTVQLINQD
Run BLAST on NCBI

transcript from alignment at sc0000215:128289..138603+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015654 ID=TCONS_00015654|Name=TCONS_00015654|organism=Clytia hemisphaerica|type=transcript|length=10315bp|location=Sequence derived from alignment at sc0000215:128289..138603+ (Clytia hemisphaerica)
TCATCAATAATCATTATTATTTCAGAAAGTTATACCCTCCCCTTATTAAA
GGCAGGTTTTAAGTAAAATCTCTTGGAATTTACTTagaattttaaagata
ttttgcaTCAAAACACTTACATAAAAGGATGGAATTTACAGAGGAGGAAG
TTAGAGAGAAGTTGAAAGAGTTGGGCTATGTCAATGTTCCACGAAGCAAG
TTACAAGAATTCATGCAAGGTATTGTTGTCTTATTTACTAATTTTACTAA
CAAAGTCAGTgacttttaaaaatgttattggTTTGAGGTATTTGTAAATT
TCAACTTTGCTTATCTTTGAGTTTCTAATATGCCTATTTGCTAAGCAAAG
CTGTATATGAATGAAGCTGGGGGTCTGGTTGGTGTTCAGAGGTTAAAGCT
CctgaaaaatcttaaatatgTAGATTATATTAGTTATCTTTGCTTGTAAA
GAACAAACAAGTTTAATTTTGctagaaaatatctttttggacctacctcc
gggtgccccggtggaggtcctataaattaacccatgtccgttcgtccgtc
cgtctgttcgttcgtccgtccgtctgttaccagcttttctcaggattggc
tcattagtttcttctgattttttgcacaatgatgcaaaatggcaatgccc
agaacgtgacggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNactttgtgcaaaatcctgtcattacttttttct
gattttttgtacaaagatggagggcaagattctctaaagaatggctgaag
tggtttttcccggaaaattcttactcgccttaaaaaacggattttcgtat
tttgggggaaattccctttaaccaaataagaaaatatagcttttaacaat
gttgactcattatttttttctgatttNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTtcatatt
ttggggaaattccctttaaccaaataagaaaatatagcttttctcaatgt
tgactcaaaatttttttctgattttttgcacaatgatgcaaaagggcaat
gcccaaaatgtgacgaagccagatttttaaggaaaattattttgggcaag
tTTGGgcaaaaaacagcttaaaaggttttttgggcctgaatggttcaagt
gattttcgtatttggggaaattcctttttaccattttacattattcaaca
cacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTtagattgagtt
tcaaaaaccAATCTTTTACattgagtattttggccggtattgaacataaa
aaagtgcttagaaaaatctcTGCCTGCAccaatattattttttcagcTTT
AATCTAGGATATGACATTGGTTCTATCTGTTTTTATATCTGCCCAGATCT
GCCCGTCTGTTTGACACaaaactttcgatttcaaaaaatttgctcAAATC
TCGTGTTCAGAAATTTTAGGCTAATATATTAGCgattatttatgattttt
caatgtttCGATTTTTTAGATTTACAAGACCTTGTCGAATATGATCAATC
AATGAGTGGTGATTCTTCTGCACCTTCCAGAGATCAATGTAAGTGATTTT
GGAATCGAATCCTCTACAGCTAAGTGTTTACTGaagtaaaattaattaat
ttcattGTGATGGAAAAATCATTTTCCAGTGGACACCCTGTCCATATCTA
AGAGAAattcttcaaagtttttattGTTTCACAGAGACTAATTTAAAGGA
AGATCTGAATTACCAAATTTTGTTGCTCATTGCTGGCTTTTCATCAAAAG
GTTGAATTGAGATGACGAAAAAACATAAGAGTATTATTTATCTGTAGACT
AGTGTTAAGAATCATTTTGTCTCAGTGAAGTATTATGAAAGAttgctttt
ttttctcaaaattctgcataattcaccaaaatctCAAGAACGTGTTAAAC
ATTTTCTGAATTATAATCCATTTTCCTTTTCCTTGCTTTAACCACTATAA
AAACCCTTTGTAAATATCTTGCAGACGACTCCATCCCAGATGATTATTCA
ACAGATGATCAACTAGATGACTCCTACTTCCAAAGGTCGACAGCCTCTTC
AGTACCAGCTCCACTACACGATGTCACTAATGGTACCAATAGATCAAGAA
GTGCCTTCTCTAAAGAAAAGGTTTGTCTTTGAGTGAGCTTCCTCTTATCA
TTGAACAATTGAGTAAAACAGTCTGGTTAGCTCAGTGCGAAAGATATTTT
CACTTTGAAACTCGTTCTGGTCAAGGGATTCACAAAAGTTTTACTAGCCA
TTTTATGATAAGTATACAATGTAAACATTTCATTTCTGTTGAATCGTAAC
TTCTATTTTAGCTAGCAAATTTCTTCGATACGTATTTTAAATGAACCTTC
AGATGGAAAACAGAAAATTCGTAGTATTATTTCGCCATCTTTTTACTTTA
GATCTTTTGctcttttttctctctttaggcaattacttttttattttctg
gtttacggaatcgccgacgtttttttttgcaaaagtaaaataaaaataaa
attgaaattcatagaaattttatttatttttgcactTCCGATTCtgttta
atctgccatgaaatggatttttttagaaaacttcaTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATTTTCTGCTGTGTATGTAAGTTTCCTcaaaacacattttatttt
ctccaacattaaagtttgaaaacaacaattttatttttattttttttcca
tccttcgctccaaaagatcatctccaaatgtccgtaaaccagaaaataaa
aaagtacttgCCTTACTCGTTTTTAATCAACCCTTACATAAGTATCCCTT
GACGTTATTAGAAAAAAACGGAATATTGCTTAAACCTTACACATTATTGC
CAACATATTCCTCTCTTTCCCAATCGCAGACAATTTTATTTCCTCTATCA
CTTGAGCTGTCTAGAATGTTGACATCTTGTTTATTTATTCCTTTGTTCCT
TGCTGTGTATCTTCCTGTCAATAAAGTTACTGTGAATATTTGACAGGGTG
ATTTTCATACACGCTACTTTTATACGTTTCCTCATATACTAGTTTCTTTT
CCGTCTGACTGTGAACTTGTACTTTGGAAATAATAATTTGGAAAAACgtg
atttaaagcttttaaggTATTGTTTTTTGTATATGCGATAGCTTTTTTGC
AAGCTATATTTGACATACAATAGTACTTGCGTCTCTCTCTGTAACACGAA
TATCTTCATAAAATACTTGAACAATCCTTTTCCTACTATTTCTTGGAAGA
AGAAAGGTAGAATTTTGGAATTGGAAGTTCATTCTAGCGATTGCTGTTTC
CGCCTTGCCATTGGAGGTATGGACCCTCGTCTTTCTCTATACATTTCATA
ATATTCCATCATTAGATTTCATCACGCAGACAACGTCATCAGGTGGCGGA
AGAGAAAGAAAATCCCACCCATTACGATACGTCATCAATGACCAGCGTTT
CTCCCAATCACGAAGATTCTTCTAAAATTCGTAGGAAGGTGGCCAGGTAA
TTTCAATTCATTACTTGAAGTAGTGATGTCGGATGTCTCACAAACAAGTT
TGGATTTACGAGACCAAAGTTcttttgacattcaaaaaaagtttcttttg
taGTGGACAGTTTTGGGATTTCTTAGTCTAGTGAGTAGTTAAGTTGATAC
TAAAGTAGAATGAAAACGGAAGAATTGAACCAAAGCTACAAAGAATGCAT
TCCTAAATCCTCATAGACTTTTCTTTAGCTTTTTTCTATTGCTCGATTAT
CTTCTTCAAGTTTCAGTTGCCTAGAGTTTTACAATGATGCTAAATTAGTA
CTCTACTTCAATTCTTCGgatgaaaacatcaaaatgttTCATTGATAGTA
TAAAAATACTAATTCTCTCATTTGGACATTTTAAAGTTGAAAGGTATCTC
CTGCTTATTCATGATCATGACATTTCTGTTTCTCTCGGAAAGAGCCATAT
GAATTTCTATGTCTTactaatttttaatattttttgcttttcaACAATAA
ATTAGTCTGGATAAGCCTCCCCAAGTTAGACCAATTTTCTCGTGTTTCTT
TTACAATATTTTACGAAACTCCAGAAGGAACCTATCACTTTCTTTGAAGA
TTAGTGCTGCAGATTATGTATAAGACTATTTCTCGTTCTTATAACTTTTT
TCCAATTTATTTCAATCATAGGAAATGCGAAGGACAGACGCGTGTTTTTG
ACGAAACTTTCACGGATAGTGACGTAACGGATATCACACTTCTTGAAGAC
AGGATCAAGAACCTTCCATACCATCAACAACAACATCAAGACCACCGACA
TCTTCAACGAGCACCTTCAGATACTTCAAATATGTCTACTACTTCAACTC
AAGCATCCTCTTTACCTGCGTTCATACGTACTTCCAAAAGTCACCCGCAT
ACTAAAGGGATCAAGAAAAATGACCCAGTCAACAGGTAAGTTCTTATAAA
GCAGTGGCATTTTCGTCAAtagtcttttttgctaaaatgtTCGACATCtt
attctgttttcttttttaaaatgagCTTCTTTAGTACAGCATTGTTGCAG
TACTTTTAATCATCGTCATTTCATTCATATTCATTTATCATTGTAGATAT
CATCAGTTCAAAACAGGATGGGAGCAAAATAAAATGCCCGGTGAAGCGAA
ACATTCCAAGTTGCGATGGCAAGTTCGAGTAAGTCCTAAATTCCCAAGAT
TATTCTCAATATTAAAGCCTATAGACCAGGAATTTGTTGATGATATTATT
GTCTAATGTATTTGAGTTGGGGAACTAGCATTTTTCTTAACCTGCATGGA
ATAACACTTAACAAATTCAAAGCTTCATTTTTTGTAGTACTTTAAGTTTC
TTGCGTACAATCATCGGCtcagggggggtcaagcagttagtacaagacat
catgcctactaagtgattctttggaggaaagaggccacaccaccaccctt
tgacAGTTAGTATGAAATATACNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNcccccccccccctgatcgGCTCCATACAAAATGATCT
AACttgttgaaaaaaatcaaatttttacaaGGCTCAGGGTTGTAAAATGT
cgtaaaattataataaaaaattgaaaaaaagaaacaagaaaatgCTTTTC
TCTGAAAtaacactttaaaaaaattaatataagAAGTGAAACTAACGATT
TAATTACgacttttttctttgtatttctagGAACAAATGCTGACTTATGA
AGCCTTTGAGGTGagtattttgaccattttattATCATAAACTTGTTATG
ATCTTTCCAACCAAATACCTCTTTACGATCTATCGCTTCAATTACACTTT
TAGAAACCAAGACATAGGCCGATGGTCAATAACTACGTTGTTCCTACCGA
CAAGAAGCGACAATCTTTGAGATGGCAAGTCCGCACTGCTATGGCTAACA
CCTGAGATGTTTGTAGCGTGGTGAGAAGggtctttttaaatttttcaaaa
ctacacAATTATGAGTTTTCAACGCTTCAGGTTTTTGTCTCAACGCTAAT
ACCTAAAACATGTGCTGGGTGTATAGATTCACTTCACTGCCTAGCTGAAC
TGAGCTCTTTGATAATTTCTGATGATTGCGGTGAGTTAATTGAAAACACT
CAACAGTGCCATCCAGTCTGTTAAATAGCCTTAAGTGGCCTCTAGGCTAG
AGTATAGGTTGTGTAAGGCAGAGGACAAGTTGTGCTAACTTTAGGTTGAT
CTTTTATACAAATTTATGACGATTCCTTTCCTTTTCCAGGTTTAGTTTCC
TATGATGTGAAGGGAAAGTTAGAATTACTATACTGATTATCAACATACAC
GCTTGGATGTGGTCTTTAATCAGATTGAATGACTTTTAGACTAGAGTTGG
CGAATGAATGAACATGTACATactgaattttaatttttgaatatATGATA
CAAATGTATTATCGTAATATTTTATTATGAAAGCGTATAatgtaaagaaa
aataattttacaaacTAAACTGCTTCTTAAAAAGTAGTGGCATTTTGCTC
GATTGTCTTTTTGCTGAAATGTTTGATATCTTAATAACTAACTCTGTGTT
GTACAGTTATTTCATATTACTGTTTTTGAAACACTTTTACTTAATAGAAA
GCGAACTTGCGAAGTCGTCTCATTCGATTTTGTTCCTGTTTGAATTTAAT
GCTCACTTTTCTTTATTTAcagagaaaaaaatacaaactcgaaaacaaaa
acagaatGCTACAGAGGATTTTGGTGTTAAATGCTGGCTCATCTTCACTG
AAGTATGCGTTATACACAGCTCTTGATAAACAAATACAAgctgtttcggc
ttccggtataATCGAACAGATCGGACAACCTAACCAGAAGATAAAACACA
AATTCCAAGTAGGTGATACAAAAGAGAAAATCAATCTCCCTTTCTcagag
aaagatttgaattataaCGGTGCTTTAAAATCGTGTTTGAATTTGCTTCG
TGAGACGGTTCCCCATGATGACGGTGGTCATTTTATTCATGGTGTTGGCC
ATCGAGTCGTTCACGGTGGTGAAACACTGTCCCAACCTGAAATTGTAAAC
ACTAGTGTTATTGAGGCTATTAAAAAGGCTTCATCACTAGCCCCACTTCA
CAATCCAGCGAATTTACTAGGTATTGAAACAGCAATGGAAAGTCTCCCAA
CTGATTGCAAACATGTGGCGGTCTTCGATACCGCCTTTCATTCCACCCTA
GCACCTCATGTCTACCATTATGCAATACCTATGGAATATTACCATAATCA
CGGCATCCGAAAATATGGTTTCCATGGCACCAGTCATGAGTACATACTTG
AAGAATCTGCGAAATTCTTGAATAAAAGAGTTGATACAATGAATATGATT
TCGTGTCATTTGGGAGCTGGGGCGAGTGTCTGTTGTATTAAAAATGGTGA
GTCAATTGATGTTTCTATGGGTTTGACTCCAATGGAGGGATTAGTTATGG
CCACAAGATCTGGTGATATTGATCCTAGTGCTCTCTTCCACATGATGAGA
GAACTGGGTATGAGCAAAGATGAAGTTGAAGAATTAATCATCAAGAAAAG
TGGATGGTATGGGTTGAGCGGAGAAATAGACGCCCGCGAGATCGAGCGAC
GTGCTGATAACGGAGAAGATCAGTTCGAGCTGACGCAGAAAATTATGGTG
CACCGTATCCGTAAATACATTGGTGCATACATGATCAATTTATGTGGCAA
GATGGATGCGCTGGTTTTTACGGCGGGTTTAGGTGAGAATTGGCCGTCCC
TTCGTGAATTATGTTTGCATAATATGGAGAGGTTTGGTATGGAGTTggat
aaggagaaaaacaaaaacatgattCTACCCGACCGTTGTAATGATGTTTC
CACCTTTTTCTCACAAATTCGTATTTTTGTCATTCCGACTGATGAGGAAA
AGCAGATCGCTCGGCAAACGGTGCAATTGATCAATCAAGATTGATAGGAG
TTAGCTGTAGGTAAT

Coding sequence (CDS) from alignment at sc0000215:128289..138603+

>TCONS_00015654 ID=TCONS_00015654|Name=TCONS_00015654|organism=Clytia hemisphaerica|type=CDS|length=2568bp|location=Sequence derived from alignment at sc0000215:128289..138603+ (Clytia hemisphaerica)
ATGAATGAACATagaaaaaaatacaaactcgaaaacaaaaacagaatGCT
ACAGAGGATTTTGGTGTTAAATGCTGGCTCATCTTCACTGAAGTATGCGT
TATACACAGCTCTTGATAAACAAATACAAgctgtttcggcttccggtata
ATCGAACAGATCGGACAACCTAACCAGAAGATAAAACACAAATTCCAAGT
AGGTGATACAAAAGAGAAAATCAATCTCCCTTTCTcagagaaagatttga
attataaCGGTGCTTTAAAATCGTGTTTGAATTTGCTTCGTGAGACGGTT
CCCCATGATGACGGTGGTCATTTTATTCATGGTGTTGGCCATCGAGTCGT
TCACGGTGGTGAAACACTGTCCCAACCTGAAATTGTAAACACTAGTGTTA
TTGAGGCTATTAAAAAGGCTTCATCACTAGCCCCACTTCACAATCCAGCG
AATTTACTAGGTATTGAAACAGCAATGGAAAGTCTCCCAACTGATTGCAA
ACATGTGGCGGTCTTCGATACCGCCTTTCATTCCACCCTAGCACCTCATG
TCTACCATTATGCAATACCTATGGAATATTACCATAATCACGGCATCCGA
AAATATGGTTTCCATGGCACCAGTCATGAGTACATACTTGAAGAATCTGC
GAAATTCTTGAATAAAAGAGTTGATACAATGAATATGATTTCGTGTCATT
TGGGAGCTGGGGCGAGTGTCTGTTGTATTAAAAATGGTGAGTCAATTGAT
GTTTCTATGGGTTTGACTCCAATGGAGGGATTAGTTATGGCCACAAGATC
TGGTGATATTGATCCTAGTGCTCTCTTCCACATGATGAGAGAACTGGGTA
TGAGCAAAGATGAAGTTGAAGAATTAATCATCAAGAAAAGTGGATGGTAT
GGGTTGAGCGGAGAAATAGACGCCCGCGAGATCGAGCGACGTGCTGATAA
CGGAGAAGATCAGTTCGAGCTGACGCAGAAAATTATGGTGCACCGTATCC
GTAAATACATTGGTGCATACATGATCAATTTATGTGGCAAGATGGATGCG
CTGGTTTTTACGGCGGGTTTAGGTGAGAATTGGCCGTCCCTTCGTGAATT
ATGTTTGCATAATATGGAGAGGTTTGGTATGGAGTTggataaggagaaaa
acaaaaacatgattCTACCCGACCGTTGTAATGATGTTTCCACCTTTTTC
TCACAAATTCGTATTTTTGTCATTCCGACTGATGAGGAAAAGCAGATCGC
TCGGCAAACGGTGCAATTGATCAATCAAGATTGAATGAATGAACATagaa
aaaaatacaaactcgaaaacaaaaacagaatGCTACAGAGGATTTTGGTG
TTAAATGCTGGCTCATCTTCACTGAAGTATGCGTTATACACAGCTCTTGA
TAAACAAATACAAgctgtttcggcttccggtataATCGAACAGATCGGAC
AACCTAACCAGAAGATAAAACACAAATTCCAAGTAGGTGATACAAAAGAG
AAAATCAATCTCCCTTTCTcagagaaagatttgaattataaCGGTGCTTT
AAAATCGTGTTTGAATTTGCTTCGTGAGACGGTTCCCCATGATGACGGTG
GTCATTTTATTCATGGTGTTGGCCATCGAGTCGTTCACGGTGGTGAAACA
CTGTCCCAACCTGAAATTGTAAACACTAGTGTTATTGAGGCTATTAAAAA
GGCTTCATCACTAGCCCCACTTCACAATCCAGCGAATTTACTAGGTATTG
AAACAGCAATGGAAAGTCTCCCAACTGATTGCAAACATGTGGCGGTCTTC
GATACCGCCTTTCATTCCACCCTAGCACCTCATGTCTACCATTATGCAAT
ACCTATGGAATATTACCATAATCACGGCATCCGAAAATATGGTTTCCATG
GCACCAGTCATGAGTACATACTTGAAGAATCTGCGAAATTCTTGAATAAA
AGAGTTGATACAATGAATATGATTTCGTGTCATTTGGGAGCTGGGGCGAG
TGTCTGTTGTATTAAAAATGGTGAGTCAATTGATGTTTCTATGGGTTTGA
CTCCAATGGAGGGATTAGTTATGGCCACAAGATCTGGTGATATTGATCCT
AGTGCTCTCTTCCACATGATGAGAGAACTGGGTATGAGCAAAGATGAAGT
TGAAGAATTAATCATCAAGAAAAGTGGATGGTATGGGTTGAGCGGAGAAA
TAGACGCCCGCGAGATCGAGCGACGTGCTGATAACGGAGAAGATCAGTTC
GAGCTGACGCAGAAAATTATGGTGCACCGTATCCGTAAATACATTGGTGC
ATACATGATCAATTTATGTGGCAAGATGGATGCGCTGGTTTTTACGGCGG
GTTTAGGTGAGAATTGGCCGTCCCTTCGTGAATTATGTTTGCATAATATG
GAGAGGTTTGGTATGGAGTTggataaggagaaaaacaaaaacatgattCT
ACCCGACCGTTGTAATGATGTTTCCACCTTTTTCTCACAAATTCGTATTT
TTGTCATTCCGACTGATGAGGAAAAGCAGATCGCTCGGCAAACGGTGCAA
TTGATCAATCAAGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008733XLOC_008733Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015654-proteinTCONS_00015654-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015654-exon-sc0000215-1491911889:128289..128507TCONS_00015654-exon-sc0000215-1491911889:128289..128507Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:128289..128507TCONS_00015654-exon-sc0000215-1510915933:128289..128507Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:128289..128507TCONS_00015654-exon-sc0000215-1575043694:128289..128507Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:131608..131676TCONS_00015654-exon-sc0000215-1491911889:131608..131676Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:131608..131676TCONS_00015654-exon-sc0000215-1510915933:131608..131676Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:131608..131676TCONS_00015654-exon-sc0000215-1575043694:131608..131676Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:132113..132258TCONS_00015654-exon-sc0000215-1491911889:132113..132258Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:132113..132258TCONS_00015654-exon-sc0000215-1510915933:132113..132258Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:132113..132258TCONS_00015654-exon-sc0000215-1575043694:132113..132258Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:133704..133834TCONS_00015654-exon-sc0000215-1491911889:133704..133834Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:133704..133834TCONS_00015654-exon-sc0000215-1510915933:133704..133834Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:133704..133834TCONS_00015654-exon-sc0000215-1575043694:133704..133834Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:134510..134773TCONS_00015654-exon-sc0000215-1491911889:134510..134773Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:134510..134773TCONS_00015654-exon-sc0000215-1510915933:134510..134773Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:134510..134773TCONS_00015654-exon-sc0000215-1575043694:134510..134773Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:134935..135016TCONS_00015654-exon-sc0000215-1491911889:134935..135016Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:134935..135016TCONS_00015654-exon-sc0000215-1510915933:134935..135016Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:134935..135016TCONS_00015654-exon-sc0000215-1575043694:134935..135016Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:136319..136348TCONS_00015654-exon-sc0000215-1491911889:136319..136348Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:136319..136348TCONS_00015654-exon-sc0000215-1510915933:136319..136348Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:136319..136348TCONS_00015654-exon-sc0000215-1575043694:136319..136348Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:136442..136558TCONS_00015654-exon-sc0000215-1491911889:136442..136558Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:136442..136558TCONS_00015654-exon-sc0000215-1510915933:136442..136558Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:136442..136558TCONS_00015654-exon-sc0000215-1575043694:136442..136558Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:136878..137003TCONS_00015654-exon-sc0000215-1491911889:136878..137003Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:136878..137003TCONS_00015654-exon-sc0000215-1510915933:136878..137003Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:136878..137003TCONS_00015654-exon-sc0000215-1575043694:136878..137003Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1491911889:137311..138603TCONS_00015654-exon-sc0000215-1491911889:137311..138603Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1510915933:137311..138603TCONS_00015654-exon-sc0000215-1510915933:137311..138603Clytia hemisphaericaexon
TCONS_00015654-exon-sc0000215-1575043694:137311..138603TCONS_00015654-exon-sc0000215-1575043694:137311..138603Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:128289..138603 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.4092	14.6897	10.6446	11.7137	43.92	32.3891	20.8352	22.4617	20.1023	19.6914	19.208	16.7729	13.7742	14.2723	18.742	23.049	23.5094	20.9309	11.3241	10.9276	14.1563	14.4075	32.4097	28.8455	33.6738	28.1195	12.0331	10.7818	32.068	29.6827
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000890Aliphatic_acid_kin_short-chain
IPR004372Ac/propionate_kinase
IPR023865Aliphatic_acid_kinase_CS
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0016310phosphorylation
GO:0006082organic acid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0016774phosphotransferase activity, carboxyl group as acceptor
GO:0016301kinase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006082 organic acid metabolic process
biological_process GO:0016310 phosphorylation
cellular_component GO:0005622 intracellular
molecular_function GO:0016301 kinase activity
molecular_function GO:0016774 phosphotransferase activity, carboxyl group as acceptor
Blast
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BLAST of TCONS_00015654 vs. Swiss-Prot (Human)
Match: HYLS1 (Hydrolethalus syndrome protein 1 OS=Homo sapiens GN=HYLS1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.545e-16
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 3 
Query:  810 KNDPVNRYHQFKTGWEQNKMPGEAKHSKLRWQVREQMLT-YEAFEKPRHRPMVNNYVVPTDKKRQSLRWQVRTAMAN 1037
            K D V RY ++K  W+  ++PGE    +LRW VREQML   E   KP+H  + NNY+VPT+KKR +LRW VR  +AN
Sbjct:  209 KTDRVARYFEYKRDWDSIRLPGEDHRKELRWGVREQMLCRAEPQSKPQHIYVPNNYLVPTEKKRSALRWGVRCDLAN 285
The following BLAST results are available for this feature:
BLAST of TCONS_00015654 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HYLS12.545e-1650.65Hydrolethalus syndrome protein 1 OS=Homo sapiens G... [more]
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