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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000230_pilon:559659..563659+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034922 ID=XLOC_034922|Name=XLOC_034922|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4001bp|location=Sequence derived from alignment at sc0000230_pilon:559659..563659+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTTAAACAAATACCAATCAACAATGAAGATTTACAGAGGTTTAA
CAGTGACTGTTATACATTTAAAGAGCATCCCTTGAGTATGTTGGAACCAT
ACCATCAAGTCTTTCCATCACTTTATATGGATCACCACAAATCATTTCAA
GAAGCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCCCAAAATC
AGGTTGAAATATTAACCAAGGAGATTACTTGGTACTAATCTCTGAATTTG
TAAAAGATAGATTAAGATTTTCTGTTCTTTAACAAAATCATCACATAATA
ATTCATACAATTCACCATTCACCATTATTATTGCTTGTTTCCCTTTTTAT
CAACAATtgttatttttcgattttctttgAAAGGCCTACCAGGCAGGCAA
AGATTGttaataaaagtttttctatttaaTCTCTATTTTTTATGTTCTAG
GAACCCGTTGGATGCAAGAAATTGTCTCTTGTCTACGGAATGGAAtggat
tttgaaaaagtaaagaCCACCTCTTTGAACCTAAGAGTTCCATTCTTTGA
GTaagtttttaaaggaaaatgagaaaaaatattcaagaagtaatgaaata
tttctaaattaatCCTGCCAACTTTATATCATTTGTATTTACAATTTAGT
GTATCTGCTGTATGCAGCACTGCAGAGAAGGAACTCAAAGCATTGGGTTC
CCTTTGTAAAACTGGAGCTGAACTTGTCAACCATACACCTCGACCAAGGA
CTATAAAAACTCATCTCAGCTATGAAATGTTGCCTCCAAAGATTCATGAA
AAAGGTGCCAAGGtatcaaagtttcttttccaAAACTTATGAATAGAATA
GAACCTAGTCAGAGATGGACCTCACTGCTATTATTACTATAATTCTTCCT
TGATATTTTCTAGATGATAAACGTCATACGAAACCCACGTGATGTTTGTG
TATCATTTCTCAATCATCATGTTCTGACAGAAAACTATACTGGTGATTTA
CAAACCATCGCAGAGATTATGTTACAGGATGTAGGACCTCTCTGTGCTCC
TTTCTTTACACATATCCTGAGCTACTGGAACCAACGAGAAAATCCAAATC
TTTTGATTGTTCACTATGAAGAGATGCAAAAAGACATAGCTGGTAAGAca
gccttttttatttttcacttgcttTATAACATATTTGAAAAAACCCATAG
TATGTAGATAAAAGTATCTTagtaatttcaaataaaaagattcATCTCTG
TTTGTATACATGCTTATTCAACATGCATGTTGTTGTCTCATTTTACATGG
AAAATCACAGCTTAAAATTTCACAATCAGATGCATGTAAAGATAAATTTC
TATAccccaaaattacaaaaaaaaacatgcatgTAGTGCGGTATTACACC
CCGAAAATGAAACTCATGAAtgtaaaagtgttttttttaatgaattttgt
gTATGATCATCAACTTTAAAGGAgaaatcaacatttttttcatatttttg
aaaaatacctaaaTCACATCATattgtagcctgggaatccaagctcatat
ttttagaaaaaacaaaaaatacctcacctcacaaagttctaaaattatag
agcttggtgcaggtagattagtctgacacagaatgttataaacagtctgt
gtgtgaacccttgttgacgtagactttctgaactttggaaacccaggcaa
acacacataatcaacttaccataaaaactctttcacaagctctaaagact
ttcaaaactactaaaaaccacatcaaaacatcagccacgtgtatttagac
ttccagtcaacagccattttgtttataaatgaatctatgttttcattttc
atttgttttccttttttctgcaaagtcagctttttccataaattatgcgc
gcgcatcgaaattatcaaaatgcacgcgaaagtactgctaagtaatacgc
cgaaagctggccaatcaggccgaacctgcattgcagggaaaaatgtccct
gcaggcgagttacctgcaccaagcgttaaaccagcagcaaaaatatcata
aactagactgtgaaaaaagtttaacgcttggattcccaggctaatcaTAT
TGCTGTGTCAATTTAAGacggccttaagtccattttttccattttgagat
aatcgactttaaaggttgagatgtgttggacttaaggctacacatttcat
gtcaatattttagaaaatgaatAGAATTAGAAACTATAGTTAGCCCTAAG
Atttaggacttaaggctgtttatgattgatatattatggaacattctaaa
ttcttattttttttgaattgcaaaaatACACCTCTTTCCCATTAGAATTC
TGTGGATTTAAGGCCGTTTTTGAAAAGCGTGCATGCTGAAATAGGGGGTT
ATGGTCGacaaaatggacttaagtcgATATACTAATAAGAAATTAATGAC
ATCTGAAATTATTTTCCACTAAAAACTTCTCTAGCAAAAGATATAGCTCA
TTTTTGTTTACAGAAaatctaatctttttaaaacaacgCATTTTATGTTA
GGGGAATAGGTTGAGCCATCTGTTTGATGTGAAAGTGTTTATAAAGTATA
ATTGGAAAAGCTCTTGCTTTTAGTTGATAAAGaactcttaaactttttta
aacttttacaacttaacttttttaatgtgtagccaaaactttttaTATCC
ACATATGGGTTAGCCAAGAGAAGGATATCATTTAAGCCATTTTTGAGTGG
AGTAAAACTATGtttgaacttttgaaaacaaccaagtgaaaataatttca
gagtccattgaaaaaattgaatttttcattggAATAAGCAGAAAACCTCT
TTTTtagcggctagttcgaaacgcaggtcacccACCTCATTTTGTGATAA
CGCCATTATTTCCATAATTTAGgtgtcactttgtcaatattaggggttga
tgatttgtcctTGAAATCTTAATAGCATATTTTGTTTGTATACAACATGT
CCATTATgcatataatatttaaaaaaacatgttatgAATGGCATGTTACG
AGTGCAGTACAGTTTTCTGGACTGTAGTTTAtatgacctgtaacctgtga
cctgcgtttcaaACTAGCCGCTTCTATAATCCATGTCAAACTGAATCTTA
CCCGAAATGATTTTGCATTATTTCTCGTTTACAAATTATCAAGCTTTTAA
GTCGcacaaaattcataaaaagtaTGAACCATATGATGTCACAAACATGT
GTAAAGTAAGGgttcattttaaacaaattatacGCTTTTTGAAGAAGGTT
TGATACAAAATAAGACAGAGGCTGAGAGtggaagtgatttttttttcggg
gAGGGGGGTACTTGTTTTGAAAACAACTATAGGtttggcccaaaaatttt
tgagacaTACAGATGGGAAATATACACATGTTCAAGAGCACGAGTAGCAC
GATATTGAATAATTTAGTTTAATTTCCTTGCTTACGAAGGAAGaattcat
ttcatttgaaaattttcatattttcataggAATAAGGTAATTTGCTACCA
TTACAGTAAAGGTACAGCtaaaaacatacccttacagtgcagcactGGTC
AAAACATACCCTTACGGTGCACTAGCGAATCTTGAAAAATTGACCCTTAA
GTGCCGCACGTCTGGTAaatcatttaccttgagtgccccccgggTATTTT
TTCGAAGTTCTGCTATATTATCTTGTACTTTCTTATTATTCTTGTAATTT
CAgagaatatgaaaaaaattaattgctGCACTTACAGCATCACTAATTAT
CAAACctttcttttttcgttttcttttgcttttcttATAGGTGTTATCAA
GCGAGTGGCCAAGTTTATAGGCACAGAAGAATATTCAGATAACCAAATAG
CAAAACTTATTGACCACACATCAGTGGATAAAATGAGAGTCAACCCTATG
GTCAATGGGACAGGAGTTATAGATGTAATTACACTTTCTTCAATTAATTA
A Coding sequence (CDS) from alignment at sc0000230_pilon:559659..563659+ >XLOC_034922 ID=XLOC_034922|Name=XLOC_034922|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000230_pilon:559659..563659+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTTAAACAAATACCAATCAACAATGAAGATTTACAGAGGTTTAA
CAGTGACTGTTATACATTTAAAGAGCATCCCTTGAGTATGTTGGAACCAT
ACCATCAAGTCTTTCCATCACTTTATATGGATCACCACAAATCATTTCAA
GAAGCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCCCAAAATC
AGATGGAAGTTAAACAAATACCAATCAACAATGAAGATTTACAGAGGTTT
AACAGTGACTGTTATACATTTAAAGAGCATCCCTTGAGTATGTTGGAACC
ATACCATCAAGTCTTTCCATCACTTTATATGGATCACCACAAATCATTTC
AAGAAGCTGAAGTTTATGAAGATGATGTTTGGATTTGCACTTTCCCAAAA
TCAGGAACCCGTTGGATGCAAGAAATTGTCTCTTGTCTACGGAATGGAAt
ggattttgaaaaagtaaagaCCACCTCTTTGAACCTAAGAGTTCCATTCT
TTGAGAACCCGTTGGATGCAAGAAATTGTCTCTTGTCTACGGAATGGAAt
ggattttgaaaaagtaaagaCCACCTCTTTGAACCTAAGAGTTCCATTCT
TTGATGTATCTGCTGTATGCAGCACTGCAGAGAAGGAACTCAAAGCATTG
GGTTCCCTTTGTAAAACTGGAGCTGAACTTGTCAACCATACACCTCGACC
AAGGACTATAAAAACTCATCTCAGCTATGAAATGTTGCCTCCAAAGATTC
ATGAAAAAGGTGCCAAGTGTATCTGCTGTATGCAGCACTGCAGAGAAGGA
ACTCAAAGCATTGGGTTCCCTTTGTAAAACTGGAGCTGAACTTGTCAACC
ATACACCTCGACCAAGGACTATAAAAACTCATCTCAGCTATGAAATGTTG
CCTCCAAAGATTCATGAAAAAGGTGCCAAGATGATAAACGTCATACGAAA
CCCACGTGATGTTTGTGTATCATTTCTCAATCATCATGTTCTGACAGAAA
ACTATACTGGTGATTTACAAACCATCGCAGAGATTATGTTACAGGATGTA
GGACCTCTCTGTGCTCCTTTCTTTACACATATCCTGAGCTACTGGAACCA
ACGAGAAAATCCAAATCTTTTGATTGTTCACTATGAAGAGATGCAAAAAG
ACATAGCTGATGATAAACGTCATACGAAACCCACGTGATGTTTGTGTATC
ATTTCTCAATCATCATGTTCTGACAGAAAACTATACTGGTGATTTACAAA
CCATCGCAGAGATTATGTTACAGGATGTAGGACCTCTCTGTGCTCCTTTC
TTTACACATATCCTGAGCTACTGGAACCAACGAGAAAATCCAAATCTTTT
GATTGTTCACTATGAAGAGATGCAAAAAGACATAGCTGGTGTTATCAAGC
GAGTGGCCAAGTTTATAGGCACAGAAGAATATTCAGATAACCAAATAGCA
AAACTTATTGACCACACATCAGTGGATAAAATGAGAGTCAACCCTATGGT
CAATGGGACAGGAGTTATAGATGTAATTACACTTTCTTCAATTAATTAAG
TGTTATCAAGCGAGTGGCCAAGTTTATAGGCACAGAAGAATATTCAGATA
ACCAAATAGCAAAACTTATTGACCACACATCAGTGGATAAAATGAGAGTC
AACCCTATGGTCAATGGGACAGGAGTTATAGATGTAATTACACTTTCTTC
AATTAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000230_pilon | genome | sc0000230_pilon:559659..563659 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 697-855:3843 |
| Aaloc | 466-693:914 |
| Aaloc | 304-465:651 |
| Aaloc | 205-300:453 |
| Aaloc | 1-201:1 |
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