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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:537911..542539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037483 ID=XLOC_037483|Name=XLOC_037483|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4629bp|location=Sequence derived from alignment at sc0000080_pilon:537911..542539- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGATTGTGGAGTAATGAATAACATTTTGGCCTTATATTTCTTCAT
CAATGTAATTCAATATGGCGAAACACAAATTTTACGAAGGGTGGATGTAA
GCACTGTCAACAACAAAGGTGAAATACTTCGTTTATCTAACTCAAAATTT
ATAAGATTTATTTTTAATGACTTATACATTTACACCCCCTTCTCACAGAC
TCGTTAGTAATTTTTCAGCCAACAGGGATAAAAATAACGTACTGAAACTC
AATGTGGATTGATATTCACATAGTTTTTTGGCTGGGGATTTCAATTCTTT
TGTTTTCAAGCCATAAAATGCCATAAAATTCAGAGGGGATGGGAAAAATG
GTAAATATTTCACAGTGAGGATTGATTTGTTTGATTATTTTCAGCGGGGA
CAAAAATTGGAGGATAATTTCTCACCGGGGACGATATTTTGGCCAATTTT
TCCAGTGGGAAGGGGTCCCAGTGGGTCGATGAAGAGGGGGTGTACATTTA
TGCTGTCTCCAGTTGCGTTAGTTGACAAGTCTGAAAAACCATAGTCCTTA
TAAAAATCCACGGTTTGGGAATCCTTTTCCAACCCCTTTTCACAGACCCG
TCAGGATTTTTCAGCCAGTGTGGGTGAAATTAACGGATTCAAACGCAATT
GAGATTGATGTTCCTATGTTTTTTTTTTATGGCTGGAGGTTTGAGTTCCA
TTTTCGTTGTCTTCAAGGCATATAATTCAGTGGAGATGGAATAAAGCACA
ATATTTTTTAGTGAGGGTTTGTTTATTTGATAATTACTAGTGGCAACGAA
AATTGGGGTATAATTTTCCACTGGGAACGGTATTTTGGCTAATCTTTCCA
GTCAGAGGGGGTCCCACCGGTTCTGTGAGAAGTAGGTGTATCTTATCATT
GGATTGCTTATAAAATGGTTTGTTTTGATCACTTTCATCATGTGAACAAT
CCAAAGAAGAGTAGTTAGAGGGACATAAAAGTAGTGACGAAATTTGTAAA
CAAACTGTATGCAGCGGGAATAAAATCAAAATAAATGTCAAAATTAAAAA
AAAAAAATATGGCTGATTTTGATTGTTTCAATTGTTTTACAAGTTTGTTT
TGGACACGCGATTTTAATTGTTCTCTTTAATGACACGTGGTTCGCGCTAT
GTTTTTTACTACTTTTACGTCCCTTTAACCATGGAGGTAAAGAAACAGGA
GAAGTATGCTATTGTAACCAAGCTCGCCCTACGATTAAAAAAATTACGAT
GTATGCATGCTCATAATCTCATATTACGTGCATTTTTAATGAGCTCTTTT
ATTCATAAGTGAAATCTTATTGGCTCGTTTAAGCTTTAGAAATTAGATGA
GACGAGATTCATTGTTTCTGACATTAGTGTAAGAAAATATTTGGACTAAA
GGCCTGTAAACTTGGCAATCCTTCATCAAATGATAAGATTTTTTAATCAA
TGTTTTCTTTAAGGTGAAATTTATTGCTTGATACTTTCCTCCAAAATTCT
CCAGCGACTTTATGTCTACAAATTGAGTCTGAAATCGTGTGTGCTTATAA
AGAAATTTTCATTTTCTGGCTTGAGAAAATATCTTTTCAAAACAAAATTG
AACGGATAACAAAATGGAACATAAACTTGTTTCATGGACAAAGTTTTATC
AAAATTTTCGTATATTAAAAGGCTAGAATCTTCAATACTGATTATTAGAA
TGTTCAGAGCAAACTTGAGTTCTACTAAAAAGTCTTATTTCATCGGGCGA
GCTTAGAATTTCTTTTGATACATTTTATAAAAGAAATCAAAAGACTTTAA
CGACCAATTACCGAGACATTCAACTCCTGTTTTTCTTTATACCTCCATGC
TTTAACAAACTGTTCAAATCAATCTTTTAACTATTGTTTTACACAAAGAA
AAAGTCAACAAAATATTATAAGAATCGGCTTCCAGACCAAGGTTCTTCAT
ACAGACTATAGAAAAACTTACTTACAAAGACCTAAAAGGGCATTTTTAAC
TTTCTCGTGAAAAACTGAAAACTGTGTTCTACAAAACATCAGTGCTAGGG
AAGAAAACCATAGATAGCGTACTTTCAACACAAAAAGTTTCAGCCTCAAA
TTCTTCCTAAATTTTTTTAAGATAGAGGGTATATTTTCTTGTAGGTTTAA
AAGGGTATCCCTGGTAAAAGTGTTATTCTTTTTCAGTTGAGTATGGCTAT
GTTAAAATGGTATCACACGACAATCACATTCTCAATGTGACAGCAATCAA
CATATCATACCACAAAACTTCCCAAGAATGCATTCGAGCTTGTCTCAACT
TTACAGATTGTTGGAGCATCAATTTGAAGGAACAGCCAAATAATGAGATT
TACGAATGTCATATTTTGGATACTGATCGATTTCGAAACGCGTCAAATTT
TGTCTCTTCCTCTACAGGAAATTCTCATTTTTCACTTGATGTGAGTAAAT
AATAAATTATCAAATTCGTCCCCAGTTTCTTAAATTACTTATATAGTCTT
TTTGATTGTCTTAACCTCCATCAGTTCAGTAAAATAAAAAAGTAAAAGAA
TTTTATAATTTGTGACAGGGGATGACTCAAAGTAAATCACCTTTTATAGA
AGAACCGAAATTCCACCGGGGTAATAACAAAGATTTTTATCGAATTTTTT
TGGAAGTTTTGACTACTTTATGCAAATATGTCGACATTTCCTAACTTGAT
GGGAACAGACAGTCAGTCATCTTCTTCGTGAAAACTCTCTCCATGTCATT
TTTTATAGCATGATTGTGAATGGGAGGAGACATGCATCAACCCAAACAAA
AAATGTATTCCAAACTACTCTGATGGTTCTTATGAATGTGTTTGCGAGCC
TATTGGTAAATACGATATTCATTGCACAAGTAAGTATTTTCAATAAGATA
AAATGATTTAAGAGTATAAGACTCCGAAACTCAAAATTGTTTTGACAATT
CTAAGATGAACAGCAAGATTCAGTAAAGAACAAATTCATTTCAATTTTTG
AGAGAAGCACTCTCCCATTTTACTTTTACAGGATTAGTTTTGTGTGCTTT
GACTCTAGATGATGTACCAGTTGTCATGGATACATCGGAAACGGGGAGAT
TGGAAGACTTCAGCCTCCCCACTTTTAAGCAAATGAGATTTTTTCCTCAA
ATTCCTAGCAAGTTTTATCTTATTTTGAGCCTCCAGCCTCCCCACTTTTA
CGGTTGTTCCGCCGGGCCTGTATAGGATAGGCTTTCCATAACAAATGGTA
TAAGATCTTACCAATACAAGGAAACCATAATTCTCTGAAATCAATCTGTG
GAGACAAACTCTAAGAATTCTATCGCGAATGTCTCAATCACAATAATATC
CAAAGAATCGAAGGTGAAGAGCACATTGGGCTCTTCCAGAAAAAATCCGT
TCATGGGGGGTGGAGGATGAATTGTCCAGGGGTAGTGAAAAAATACCAAA
CAATTGCAATGTCCAGGGGGTAAATTCCAATGTCCAGGGGTAATTTTTTG
TGTCCACGGGGTTGATTTGATGTTTGTCCAGGGGTATAAACCGTGTCCAG
GGGGTTAAAAATCAAAATGTCCAGGGGTAATTCATGAAAAAAATAATATA
TCCTCCACCCCCCATGAACGAATTTTTTCTGGAAGAGCCCATTTCATCAT
GTATTAAAGTCCAAATAGATTATAAAATTTTCGATTTACAGTTATTTAAT
GGATTTCCAAGTATATAATGTGTATATTATGGCCTGAGATTACTTGATTT
CACTGAATCTTTCCTATGTTCCCTATTCGTGATTTGATTGGTACGGTTTT
TATCCAAGATCCTGCATGATTGCTATGGTTACTTTTGTTGTGCGTTGAGT
GAAATGGGTTTGATTGAAGGGTTTCAAGGAAATAGAGTCATAACAGGTTT
ACCTTTCGCCGTCCAACATCTTCCCTGTGTATCCCAGGCTTTATTTACGT
CACTGATGGAAATAGAGGAAAAGAAGCTCGGGGATGTCATACAAAGACTA
TTTTACTCGGTTTTCACAGCTCATAATCCAACCCTTACTCCGTGTATCTC
AGGCTTTATTTATATTCCTGATAGATGCTAGAGCATGCGTATATTATCTG
ACACTATCAGTAAACATCAATAAGCCGATAACTACGCAGTTTGTTCACGA
TCACCAATATATATTTCTTTTCAGACAGAAACATTGCATTTCAAAGACCA
GTCAGTTTATCGAGCCTAAAATCGGATTCTGGGAAACCCGCGTTTGTTAC
CGATGGTTATAAAGGAGAAATGTGTGATAATTTCTCAACCAATCTTGTCC
ACTCGAAAATGGGACATATGGAAATGTGGCTGAGAATTGATTTGGGTGGA
ATGAAACAAATTAAATTTATTGATATTTTCGATCGTACAATAGGAGCACC
TTATCATCAACGACTTGCTTCTACAGATATTATTGTGTATGGTCAGAATC
CTATGGATAACCGCCAGCTTTGCAGTACTATAACATTGCAAGATACTGCA
AATGGTGATAAGGTTTTTAAAGTTTGTAACAAGGTTTTGACTGGGAGTGG
AGTTGAGTTATACAAGGCCCCCAATGGATGGCAAATGATACATCTTTGTG
AAATAGCTGTGTACGGACCTACAAAATAA Coding sequence (CDS) from alignment at sc0000080_pilon:537911..542539- >XLOC_037483 ID=XLOC_037483|Name=XLOC_037483|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000080_pilon:537911..542539- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGATTGTGGAGTAATGAATAACATTTTGGCCTTATATTTCTTCAT
CAATGTAATTCAATATGGCGAAACACAAATTTTACGAAGGGTGGATGTAA
GCACTGTCAACAACAAAGATGATTGATTGTGGAGTAATGAATAACATTTT
GGCCTTATATTTCTTCATCAATGTAATTCAATATGGCGAAACACAAATTT
TACGAAGGGTGGATGTAAGCACTGTCAACAACAAAGTTGAGTATGGCTAT
GTTAAAATGGTATCACACGACAATCACATTCTCAATGTGACAGCAATCAA
CATATCATACCACAAAACTTCCCAAGAATGCATTCGAGCTTGTCTCAACT
TTACAGATTGTTGGAGCATCAATTTGAAGGAACAGCCAAATAATGAGATT
TACGAATGTCATATTTTGGATACTGATCGATTTCGAAACGCGTCAAATTT
TGTCTCTTCCTCTACAGGAAATTCTCATTTTTCACTTGATTTGAGTATGG
CTATGTTAAAATGGTATCACACGACAATCACATTCTCAATGTGACAGCAA
TCAACATATCATACCACAAAACTTCCCAAGAATGCATTCGAGCTTGTCTC
AACTTTACAGATTGTTGGAGCATCAATTTGAAGGAACAGCCAAATAATGA
GATTTACGAATGTCATATTTTGGATACTGATCGATTTCGAAACGCGTCAA
ATTTTGTCTCTTCCTCTACAGGAAATTCTCATTTTTCACTTGATCATGAT
TGTGAATGGGAGGAGACATGCATCAACCCAAACAAAAAATGTATTCCAAA
CTACTCTGATGGTTCTTATGAATGTGTTTGCGAGCCTATTGGTAAATACG
ATATTCATTGCACAACATGATTGTGAATGGGAGGAGACATGCATCAACCC
AAACAAAAAATGTATTCCAAACTACTCTGATGGTTCTTATGAATGTGTTT
GCGAGCCTATTGGTAAATACGATATTCATTGCACAAACAGAAACATTGCA
TTTCAAAGACCAGTCAGTTTATCGAGCCTAAAATCGGATTCTGGGAAACC
CGCGTTTGTTACCGATGGTTATAAAGGAGAAATGTGTGATAATTTCTCAA
CCAATCTTGTCCACTCGAAAATGGGACATATGGAAATGTGGCTGAGAATT
GATTTGGGTGGAATGAAACAAATTAAATTTATTGATATTTTCGATCGTAC
AATAGGAGCACCTTATCATCAACGACTTGCTTCTACAGATATTATTGTGT
ATGGTCAGAATCCTATGGATAACCGCCAGCTTTGCAGTACTATAACATTG
CAAGATACTGCAAATGGTGATAAGGTTTTTAAAGTTTGTAACAAGGTTTT
GACTGGGAGTGGAGTTGAGTTATACAAGGCCCCCAATGGATGGCAAATGA
TACATCTTTGTGAAATAGCTGTGTACGGACCTACAAAATAAACAGAAACA
TTGCATTTCAAAGACCAGTCAGTTTATCGAGCCTAAAATCGGATTCTGGG
AAACCCGCGTTTGTTACCGATGGTTATAAAGGAGAAATGTGTGATAATTT
CTCAACCAATCTTGTCCACTCGAAAATGGGACATATGGAAATGTGGCTGA
GAATTGATTTGGGTGGAATGAAACAAATTAAATTTATTGATATTTTCGAT
CGTACAATAGGAGCACCTTATCATCAACGACTTGCTTCTACAGATATTAT
TGTGTATGGTCAGAATCCTATGGATAACCGCCAGCTTTGCAGTACTATAA
CATTGCAAGATACTGCAAATGGTGATAAGGTTTTTAAAGTTTGTAACAAG
GTTTTGACTGGGAGTGGAGTTGAGTTATACAAGGCCCCCAATGGATGGCA
AATGATACATCTTTGTGAAATAGCTGTGTACGGACCTACAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:537911..542539 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 496-948:454 |
| Aaloc | 373-492:1872 |
| Aaloc | 121-372:2442 |
| Aaloc | 1-117:4630 |
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