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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1186468..1190663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037556 ID=XLOC_037556|Name=XLOC_037556|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4196bp|location=Sequence derived from alignment at sc0000042_pilon:1186468..1190663- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAATCCAAGCCAGACATTTCAGAAGTTGCTGCCTTCGACTCATC
CAAGTTAAAACATGTCGAAACAGAGGAGAAAAATACACTTCCATCAAGTG
ATTGTAAGTATAAAACTTGTCTCCTGCTCTTTTTGCTGTACAGCTAGGCT
CCTCATTTTAAACAAGAGGTGTATTTTTGGTCCGTCTTGATGTCAATTTA
TCTACTTCCTCTTGTTTTTTTCTTTTGTAAACCTGCTGAAATTCAGGAGA
TTAATATTAGATATCATGGAATAGAGATAAAATCTTTCAGTTGGATTATC
CTTCTTGAAATAGCTACAACATGCTAGGTGTAATATACAGGACAGTTGTA
TATATTTGTATATGCTACCCACTTTTTTTCAACTAAAATGGCTGTATGAG
TATTTTTACTTTCTCATGGCATGACTCTGCATGAGCAGCCGTCAGCAGAT
TTTTTTAAATATCTGTTATTTTTTTTCAGGAGAGTAAATTTTTTATGGAT
AAATCTAGGAGAGACTTTTCTTCAAAACACCCATGTAAAATCCAGGGGTC
GCCTTAAAGACATCTGTTCTTAAAATCCATGAGCACATTTTAAGGAAAAA
CACATACACGTCTTCTTTTTTTTTAAGAAACTAGTTTTACCAAGCATCCT
CAATGTTTCTTAAGAAATCGGCCTTTTGAGCCGATGTTTCTTACATGTTT
CTAAACTTTTTGACATAATTAGCCTTGATTGGAAGGTTCTTATAAAAAAC
CGAATTAAAAAATGTTATTTTCTCATTCTCAGCCTCTCAGCATGTTTCTT
AAAAGTGTATTTCTTAAAAAAAAAAAGACGTGTACAATTTTCCAGCGGAC
AATCTGTTTAAAAATCAGCAAAAATTCCACGAGCTAAATTGTGAAAAACA
CAACCAGATGCCAGATTTTTTTTCCAGGGAGCTTCATAATTTTCTTAAAA
GGTCTCATTTTCTAGGAGCATTTTAATTTTCTTAGAGAATAGCTGTTATA
TTTTTCCAGGAGCGTAATATTTCTGGTGCTAATAAATTAGGGTCAGAATA
AGTGCAGGGGGTGGGTTGGTTGGAAAATTCTTCAGATTTTAATAAATAAC
TTTACTAGGGAAGTTGGAAATTATTGCACCTCTAAATACCTCCAAAATAA
GGTAATTATAGACTACAGATAAAGCCTGTAAAGGCTTGATATTTATTTAG
AGCAAAATAAGACATCTATCATGATCATCATGATATCGCGTTTAGCAAAA
GGTCAATGATGGTAGCCAATTTGTTTTACATGTGCACTACTTTGTTCTTT
GTGTGCACAGACTTGTTAGAAACAAGAAGAAAAATCAATTGGAAAATCCT
CCAATCCCCTAACAGTACTACTAGTACTATACATTTGTGTCATTCCCTAG
ATCATCAGCTATACCTCGAAACTACCTTTTTCCAGCGGTTTTAGCAAAAA
TAATATTTAAAAATTGTTGGCAACTTCTTAGAGTATGTCAAGAGTTAGCG
AAAGTGGTAAATGTTAATATCCTCACAAAATAATCTAGACAACATAATCC
TTTTAAGGGGCCCCCCAGCGGTTTGCGTGAATGCGTGAATGGGCATTTTC
AGTTGCGTGAATGCGTGAAAATTGGGAAAAAAATGTGAATTTTTCCTTTT
TTCCACCGATCAATGTGCAGTTTTCCCGATTTTCCAATGTTTCCCCGAAT
TTTTCCGAAAATTTTCCAATTTCCTGAAAAAACAGGTTATTGCCTGAAAG
TTGAGGAAAATTTGCGTGAATGCGTGAATTTCGAAAAAAAATTGCGTGAT
TGTGTGAATTGAGGGTCTGCTGTGGGGGGGGGGCTCTCTTTTAATCCCCA
CCCAAAATGCTTGAACAGGAGACTTACATAGCTTTAGTAGCTTAACCCGT
CCTACAATGGACATCCTACAAGGGTTATCAAACCCTCTGGTGTCAAATTT
TAAATATCCTGAAACCCTCCCTTGAAACTCCTATCCTATAGGGGTTGAAG
CTATGTTATATAACCAATAATAAAAGTTTGAAGTATTTTCAATGTGTATT
TCATTCTCTTTTAGTGATTCAAGAAGAAGCAGTTGAATCCAGGTCAGAAG
TCAAAGTCTTTGACAAATCTAACCTGAAATCAGTTGAAACCGTTGAGAAA
AACACTCTCCCAACTGCTGCAACCTTAAAAGAAGAAACTCGACCAGAGGT
CTTGCCTGATGTTTCTGGAGTTGCAGAATTTGATGCTTCTAAATTGAAAC
ATGTTGAAACAGAAGAAAAAACCGTTTTACCCACTTCAGATGTTATTCAA
GAAGAAGCAGTTGAATCACGTGCAGAGGTCAAAGTCTTTGACAAATCTAA
CCTGAAATCAGTTGAAACTGTTGAGAAGAATACTCTCCCAACTGCTGCAA
CCTTGAAAGAAGAAACTCGACCAGAAAGTTTGCCAGATGTTTCAGGTGTT
GCTGAATTTGATGCCTCCAAATTAAAGCATGTAGAAACAGAGGAAAAATC
TGTTCTCCCCACTGCTGATGTTATTAAGGAGGAATCTGTTGAATCAAGAT
CTGAGGTTAAAGCGTTCGATAAATCAAAACTCAAATCGGTTGAAACAGAG
GAAAAGAACACTTTACCAACTGCTGCAACTCTAAAGGAGGAAACTCGACC
AGAGGTGTTACCAGACGTGTCGGGCGTTGCTGGATTTGATCCATCCAAAT
TAAAACATGTAGAAACAGAGGAAAAAACTGTTTTACCCACCGCAGAAGTG
ATTAAAGAAGAATCGGTTGAATCTCGGTCAGAAGTTAAGTCTTTTGATAA
ATCTAAACTTAAATCTGTAGAAACAGAGGAAAAGAACACTTTGCCAACTG
CTGCCACCCTCAAAGAAGAAACGCGACCAGAAAGCTTGCCTGATGTTTCA
GCCGTTGCTGGATTTGATGCCTCTAAATTAAAGCATGTAGAAACAGAGGA
AAAAACTGTTCTCCCCACCGCTGATGTCATTAAAGAGGAAGCGGTTGAAT
CAAGATCTGAGGTTAAAGCGTTTGATAAATCAAAACTTAAATCTGTTGAA
ACAGAGGAAAAAAACACTTTGCCAACTGCTGCAACATTAAAGGAGGAAAC
TCGTCCAGAGGTGTTACCAGACGTGTCAGCTGTTGCAGGATTTGATGCCT
CCAAATTAAAGCATGTAGAAACAGAGGAAAAAACTGTTTTACCCACCGCA
GATGTAATAAAGGAAGAGTCGGTCGAATCTCGATCAGAAGTCAAATCTTT
TGATAAATCTAAACTTAAATCTGTTGATACAGAGGAAAAGAACACTTTAC
CAACTGCTGCAACCTTAAAAGAAGAAACTCGTCCAGAGGTGCTGCCAGAT
GTTTCTGGAGTTGCAGGATTTGATGCTGCTAAATTAAAACATGTAGAAAC
AGAAGAAAAAACCGTTTTACCCACCGCAGAAGTCATTAAAGAAGAAGCAG
TCGAATCACGATCTGAGGTTAAAGCTTTCGATAAATCAAAACTTAAATCC
GTTGATACAGAAGAAAAGAATACTTTACCAACTGCGGCCACTCTCAAAGA
GGAAACTCGCCCAGAGGTCCTTCCAGATGTTTCAGCTGTTAAAGATTTCG
ACAAGGGTCAATTGAAAGAATCAAAGACAGAAGAAAAGGCAGTATTACCA
ACCAAAGAAGGTGAGTTCACAATTAAACTGTTTATTTTTAAAATTTAACA
TCTTCAGGGCTAGAAATAACTGTCGGACCCAAATAGCTTCATGTCCGACC
CAAAAATCGTAATTTTCAAGCTAAAGCAACTCTGATCGGACATTTTGTCC
GACCCACTTGAAATTGTTATTTCGAGCCATGCAGTCTGTTTCTCAATGCT
GGACTGCAGAGTAATTTTTAAGGTTTATAAAAATCAGTTTGGTGCTAGAA
TGCTAAAACAATAGTAATACAGAATGTAAAACATCTTCATATTTTGCTTT
TTAGTCATCGATGAAGAAAAACGTGAATCGAGGGCGGAAGTCAAAGCTTT
TGATAAATCTAACCTGAAAAAAGTAGAAACTGTCGAGAAGAATTCACCAC
CAACTGCTGAGGGTAAAACTAGTGAAACTGTACAATCTGAAAATAAGAAA
CCTGAAGTATCTTCTGAGGCAAGCAGCCCTTCAGAACCAACACCCACTAC
TACCAATGAGAGTGAAAATAAAAAGAAAGGTTGTACTATCCTATAA Coding sequence (CDS) from alignment at sc0000042_pilon:1186468..1190663- >XLOC_037556 ID=XLOC_037556|Name=XLOC_037556|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2058bp|location=Sequence derived from alignment at sc0000042_pilon:1186468..1190663- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGAATCCAAGCCAGACATTTCAGAAGTTGCTGCCTTCGACTCATC
CAAGTTAAAACATGTCGAAACAGAGGAGAAAAATACACTTCCATCAAGTG
ATTATGAGTGAATCCAAGCCAGACATTTCAGAAGTTGCTGCCTTCGACTC
ATCCAAGTTAAAACATGTCGAAACAGAGGAGAAAAATACACTTCCATCAA
GTGATTTGATTCAAGAAGAAGCAGTTGAATCCAGGTCAGAAGTCAAAGTC
TTTGACAAATCTAACCTGAAATCAGTTGAAACCGTTGAGAAAAACACTCT
CCCAACTGCTGCAACCTTAAAAGAAGAAACTCGACCAGAGGTCTTGCCTG
ATGTTTCTGGAGTTGCAGAATTTGATGCTTCTAAATTGAAACATGTTGAA
ACAGAAGAAAAAACCGTTTTACCCACTTCAGATGTTATTCAAGAAGAAGC
AGTTGAATCACGTGCAGAGGTCAAAGTCTTTGACAAATCTAACCTGAAAT
CAGTTGAAACTGTGATTCAAGAAGAAGCAGTTGAATCCAGGTCAGAAGTC
AAAGTCTTTGACAAATCTAACCTGAAATCAGTTGAAACCGTTGAGAAAAA
CACTCTCCCAACTGCTGCAACCTTAAAAGAAGAAACTCGACCAGAGGTCT
TGCCTGATGTTTCTGGAGTTGCAGAATTTGATGCTTCTAAATTGAAACAT
GTTGAAACAGAAGAAAAAACCGTTTTACCCACTTCAGATGTTATTCAAGA
AGAAGCAGTTGAATCACGTGCAGAGGTCAAAGTCTTTGACAAATCTAACC
TGAAATCAGTTGAAACTGAGGAAAAGAACACTTTACCAACTGCTGCAACC
TTAAAAGAAGAAACTCGTCCAGAGGTGCTGCCAGATGTTTCTGGAGTTGC
AGGATTTGATGCTGCTAAATTAAAACATGTAGAAACAGAAGAAAAAACCG
TTTTACCCACCGCAGAAGTCATTAAAGAAGAAGCAGTCGAATCACGATCT
GAGGTTAAAGCTTTCGATAAATCAAAACTTAAATCCGTTGATACAGAAGA
AAAGAATACTTTACCAACTGCGGCCACTCTCAAAGAGGAAACTCGCCCAG
AGGTCCTTCCAGATGTTTCAGCTGTTAAAGATTTCGACAAGGGTCAATTG
AAAGAATCAAAGACAGAAGAAAAGGCAGTATTACCAACCAAAGAAGAGGA
AAAGAACACTTTACCAACTGCTGCAACCTTAAAAGAAGAAACTCGTCCAG
AGGTGCTGCCAGATGTTTCTGGAGTTGCAGGATTTGATGCTGCTAAATTA
AAACATGTAGAAACAGAAGAAAAAACCGTTTTACCCACCGCAGAAGTCAT
TAAAGAAGAAGCAGTCGAATCACGATCTGAGGTTAAAGCTTTCGATAAAT
CAAAACTTAAATCCGTTGATACAGAAGAAAAGAATACTTTACCAACTGCG
GCCACTCTCAAAGAGGAAACTCGCCCAGAGGTCCTTCCAGATGTTTCAGC
TGTTAAAGATTTCGACAAGGGTCAATTGAAAGAATCAAAGACAGAAGAAA
AGGCAGTATTACCAACCAAAGAAGTCATCGATGAAGAAAAACGTGAATCG
AGGGCGGAAGTCAAAGCTTTTGATAAATCTAACCTGAAAAAAGTAGAAAC
TGTCGAGAAGAATTCACCACCAACTGCTGAGGGTAAAACTAGTGAAACTG
TACAATCTGAAAATAAGAAACCTGAAGTATCTTCTGAGGCAAGCAGCCCT
TCAGAACCAACACCCACTACTACCAATGAGAGTGAAAATAAAAAGAAAGG
TTGTACTATCCTATAATCATCGATGAAGAAAAACGTGAATCGAGGGCGGA
AGTCAAAGCTTTTGATAAATCTAACCTGAAAAAAGTAGAAACTGTCGAGA
AGAATTCACCACCAACTGCTGAGGGTAAAACTAGTGAAACTGTACAATCT
GAAAATAAGAAACCTGAAGTATCTTCTGAGGCAAGCAGCCCTTCAGAACC
AACACCCACTACTACCAATGAGAGTGAAAATAAAAAGAAAGGTTGTACTA
TCCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1186468..1190663 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-1029:241 |
| Aaloc | 412-786:913 |
| Aaloc | 106-408:2131 |
| Aaloc | 1-102:4197 |
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