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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000020_pilon:912620..916142+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_044344 ID=XLOC_044344|Name=XLOC_044344|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3523bp|location=Sequence derived from alignment at sc0000020_pilon:912620..916142+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCACCTCCATTGCATGTACAATATTTTTACTCAACCTGGATCAACTGAG
TTCTATACAACACCTTATCAATTGGCCAAGaaaaaaaCCAACTGTCATAC
TGTATTCCATGTTAATGATATTCTATATTGGTAGACAAATATTTGTTTTG
GCTGCTTTGAACTCTCTTAAGATCCGAAACTCCGATTTTGGAACAAATGT
AGCACTTCAGATCATGATGATTTACTTTAGTCTTATGTTTTACTGCATGA
AAGTTGCACTATATTTGAGAGCTGTAAGAGATGTAGTTTATGCATTACAG
AGACATGGGAAAGGAAAGATCCACTGGAGATATTATTCTGTTGTGATTGT
ACCAACAATATTAGTTGTGCTATTTATATCAGAGTGTTACTCAAAAGACA
AACAATGGACCCAACAAATGTTTGATCGCACCTACGTCAAGGTCATTCTT
TTGGTGCTGATGGGATTCACAGCTTTGATTGGATTCGGTTCAACGATCAC
CATTTTGACAcagcaaattttgaattttagaagcCTCGACCTGAGCTTCA
GCGATGGGTTTACCAGACTATCACAAGCTAACCGtttaagaaacattttt
atgaCATCAGTTATCTTTACTGTGTTTTTGTCGAATAATATAAACTTTGC
CCTTGTCGAATTTAATGCTGTTCAACCAAAACTTGTGCTTGTTGATAGCG
TTTTCCATTTATTGTTGGTAAGCTATTCTTCAATGGAAGATATCCTTATT
TCATACACAAACTGCTTGAATTACAACTTACTTCTTTCAGTTGCATTCCT
AGTACCAAAATAAGTGTCCTGAGTCTGTAAAATTATTTATACCTGGGAAC
AAGTTTTTCATCCTTGCTAAAATTAGGCtctttgaataattaaaaaaata
atgaacctGAGCCTAGTATTGAATTAAATTCTTGTCCAATCATGATATCT
AAGTGCAATAAAGGGAATATAGACTTAGCTAGCAAGTTTTACTTATCCAG
ATTTTCACTCAACCAAACTTATCTTGTATTTACAGGGGCTTCACTTCCTT
GTTTTGGAATGGTGGTTTCATGATAAGGTATGATACAATGTTAAAAGTTT
GCAAATTTTCTTCTCGCTTTTCTGTATAATAGTACATTGTTTCTTCCTTG
GAATCCATTACAATTTGAGAGTCACTCAGGGCTAATTtattgagaaaaat
gaaaatacttacAGTGTGTCCAAAAATGTGGAACcatttttatatataaa
gtaaaattctcaaaactatATCTAAACTGGGCTTAAATTGAAATAAGGTT
aaaattctctgttcaatcaatagatattcaattcccaagatgattgaata
ggtttttggacctaccccaaTGGGGTGGGGGTCCTatacctgtgtttgtt
cgtccgttcgttcgtctgttaccaacttgtctcaggattgaatcatagga
atcttttgatttttggcacaaaggtgcagaatggtagtggccaaaatatG
ACGagcccaattttccaaaaaaaaaaattttgggcaaatttcagccaaaa
attgctaaaaagagGGTTTTTAAGACTTCATGAGAAATTggatcgttaat
tttttctgactttttgcatgaaagtagggtaccatcattggtaaaagatg
gctcaagcagattttcacaaaaaaaaattttcggctcacaaaacgaatct
ttatccataagaattgctatttataagcatagatcaatgttcttgtagtc
atattattatttttattactttttttaagatgaaaatgtcacggtttagg
gcaatggtttgagttttctagaaatacttattattttttttggctgaaaa
acgaatctttatctataagaatcactatttataagcatagatcaatgttc
ttagccaaatttaaaaaaaaatgtcacggtagagcgtgatggtttgagtt
ttctagaaaccttaTTTATAAGCTGTAAATTTTTTGGATAGTGgattgtt
ggacctaccccggtggagtggaggtcctataaattaacctgtgttcgttc
gtctgttcgcaaatttgggccaaaaaacggctgaaaaacggtttttttgg
gctttatgaaaaattggatcataaattttttctgattttttgcatgaaag
taccatcataggtaaaagatggttcaagcagatttttgcaaaaaaatttt
gttggctaaaaaaacgcatgtttatctataagaatcactattaataagcg
tacatcgatgttcttagtcaaattattcaatttctttataagatagatga
tttttttgctcatgagggcttacttttatagaatatgtgtgtttcgacat
gaaattttggttgcttggcgtgtttgtatagaaaaactggctaaatttga
tatatttttagaagcacattatcaattacttaggtattagcttttctcga
gattggccctttcattctttatgattttttgcacaaagatgcataacttt
aaaccctcgaatgtgacggagctcgatttttgggaaaaaacattttaaga
atttttcagctcaaaaaacgcttctttatctataagaatcactattaata
agcatacatcaatgttcttaacattactgaattttttgatgagatatatt
tttttgctcGCGAAGTCTTGagtatgaaagaatatttcaatagatcgtca
ctatttgtgttctgaatgattgtttaatggtcacgctcacgtagatatca
attatatatgtgttaaatgcataaccaggtaggtccataaaagtatcact
tgtttaagaTGAAAAAGTCACGGTGGGggcaatggtttgagttttctaga
aacacttattatttttttggctgaaaaacgaatctttatctataagaatc
actatttataagcatagatcaatgttcttagccaaattattatttttatt
atattttttataaaagaagaaaatgtcacggtagagcgcgATGATTTAAG
TTTTCTAGAAACCCTATCTTGTGCATTTTTCGGATAGTGGAttgttttat
aaagaaaagcgtttaatagctttttttttctttttcaaaagtctttttca
atagtgttgataatttctatcaatagatatgctttcgttatatatttttt
tgttttgtccagttatgtcttatgcgTTTCATTgcttcaatgttcattga
ttagttttgataatcaggtaggtccataaaagtatcacttgttaagactg
aaatattaagtatacaagtcataaaattttgcataaatcATGAGGAtttc
actttatataaaaatgtgtcCGCTTTTTCTGCTGATTACTGTAGTTTGGA
CCACAGCATTAGTTATCtatgatatataaaaaaatactaaattcTTCCCT
TAGGAATTGAGGACGCCTTTCAAATGGCAACGTCAGCGGGAAGTTCGAAA
ATTAGCACAAAAATCACGTCATGTTGCCTTCGCAAGCCACAAATCATCTG
AAAGTCTTGCTGTTATCCAGTGA Coding sequence (CDS) from alignment at sc0000020_pilon:912620..916142+ >XLOC_044344 ID=XLOC_044344|Name=XLOC_044344|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000020_pilon:912620..916142+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCACCTCCATTGCATGTACAATATTTTTACTCAACCTGGATCAACTGAG
TTCTATACAACACCTTATCAATTGGCCAAGaaaaaaaCCAACTGTCATAC
TGTATTCCATGTTAATGATATTCTATATTGGTAGACAAATATTTGTTTTG
GCTGCTTTGAACTCTCTTAAGATCCGAAACTCCGATTTTGGAACAAATGT
AGCACTTCAGATCATGATGATTTACTTTAGTCTTATGTTTTACTGCATGA
AAGTTGCACTATATTTGAGAGCTGTAAGAGATGTAGTTTATGCATTACAG
AGACATGGGAAAGGAAAGATCCACTGGAGATATTATTCTGTTGTGATTGT
ACCAACAATATTAGTTGTGCTATTTATATCAGAGTGTTACTCAAAAGACA
AACAATGGACCCAACAAATGTTTGATCGCACCTACGTCAAGGTCATTCTT
TTGGTGCTGATGGGATTCACAGCTTTGATTGGATTCGGTTCAACGATCAC
CATTTTGACAcagcaaattttgaattttagaagcCTCGACCTGAGCTTCA
GCGATGGGTTTACCAGACTATCACAAGCTAACCGtttaagaaacattttt
atgaCATCAGTTATCTTTACTGTGTTTTTGTCGAATAATATAAACTTTGC
CCTTGTCGAATTTAATGCTGTTCAACCAAAACTTGTGCTTGTTGATAGCG
TTTTCCATTTATTGTTGTTCACCTCCATTGCATGTACAATATTTTTACTC
AACCTGGATCAACTGAGTTCTATACAACACCTTATCAATTGGCCAAGaaa
aaaaCCAACTGTCATACTGTATTCCATGTTAATGATATTCTATATTGGTA
GACAAATATTTGTTTTGGCTGCTTTGAACTCTCTTAAGATCCGAAACTCC
GATTTTGGAACAAATGTAGCACTTCAGATCATGATGATTTACTTTAGTCT
TATGTTTTACTGCATGAAAGTTGCACTATATTTGAGAGCTGTAAGAGATG
TAGTTTATGCATTACAGAGACATGGGAAAGGAAAGATCCACTGGAGATAT
TATTCTGTTGTGATTGTACCAACAATATTAGTTGTGCTATTTATATCAGA
GTGTTACTCAAAAGACAAACAATGGACCCAACAAATGTTTGATCGCACCT
ACGTCAAGGTCATTCTTTTGGTGCTGATGGGATTCACAGCTTTGATTGGA
TTCGGTTCAACGATCACCATTTTGACAcagcaaattttgaattttagaag
cCTCGACCTGAGCTTCAGCGATGGGTTTACCAGACTATCACAAGCTAACC
GtttaagaaacatttttatgaCATCAGTTATCTTTACTGTGTTTTTGTCG
AATAATATAAACTTTGCCCTTGTCGAATTTAATGCTGTTCAACCAAAACT
TGTGCTTGTTGATAGCGTTTTCCATTTATTGTTGGGGCTTCACTTCCTTG
TTTTGGAATGGTGGTTTCATGATAAGGGGCTTCACTTCCTTGTTTTGGAA
TGGTGGTTTCATGATAAGGAATTGAGGACGCCTTTCAAATGGCAACGTCA
GCGGGAAGTTCGAAAATTAGCACAAAAATCACGTCATGTTGCCTTCGCAA
GCCACAAATCATCTGAAAGTCTTGCTGTTATCCAGTGAGAATTGAGGACG
CCTTTCAAATGGCAACGTCAGCGGGAAGTTCGAAAATTAGCACAAAAATC
ACGTCATGTTGCCTTCGCAAGCCACAAATCATCTGAAAGTCTTGCTGTTA
TCCAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020_pilon | genome | sc0000020_pilon:912620..916142 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 811-930:3404 |
| Aaloc | 769-810:1036 |
| Aaloc | 52-768:1 |
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