XLOC_000371 (mRNA) -

Overview
NameXLOC_000371
Unique NameXLOC_000371
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000135_pilon:420880..421761+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000371 ID=XLOC_000371|Name=XLOC_000371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=882bp|location=Sequence derived from alignment at sc0000135_pilon:420880..421761+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTGAATAGTAAAAAATCTACATCTGGGGAAATAAGCACCAAAAT CCTACAGAAGTCTGCTAATATCTGTTCTTTTGCACTCAAAGATTGCTTCA CCTCTTGTCTCGACAAGACTATTTTCCTGGAATCCTTAAAACGAGCTACA ATTACCCCGGTTCTTAAAGAAGGCAATCCGACGAGTGTTAAAAACTACAG ACCTATTAGCATACTTCCTACAGTATccaaagtatttgaaaaaatcattg cccAACAATTAAAtccttttttagaaaactgTTTTTTCAGATTTACTGTG TGGCTTTCGAAAAGAACATACAGTACACAACATGCTCTATTGCGATTATT ACATCTCTGGCAAAGGGCACTTGATGATTCAAATATTGTGGGTACAATAC TTATGGATTTATCAAAAGCTTACGATtgtttaccccctgatttactTATT GCAAAATTAGCAGCATATGGTGTTAACCACAATAGTCTACTCTTTATATA TGATTATTTGATAAACCGTTACCATAGAGTCAAAATTGGAAATAGTCTGA GTAGCTTCTTATCTATTAGTATGGGCGTCCCTCAGGGATCCATTTTAGGC CCAAttctttttaacatatttttgaaTAATCTCTTACTATCTGACCTTGA AGCAGAACTCTGTAACTTTGCTGATGACAACACCCTTTTCGCAATCGCTA AAGCCCTTGCTGAAATTATCGAAATTCAAGATATTTTGTACTGGGGTAAA ATCAATGGGCTTGTTGCCAATCCAGGAAAGTTCGAAGTTATGTTTCTTGG TAGATTTGAGCCTATATCTACTTTTAATATAGGAAATATCaaagttaaag ttaaaaatCAGGTCAAACTTTTAGGTATCTAA

Coding sequence (CDS) from alignment at sc0000135_pilon:420880..421761+

>XLOC_000371 ID=XLOC_000371|Name=XLOC_000371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1764bp|location=Sequence derived from alignment at sc0000135_pilon:420880..421761+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTGAATAGTAAAAAATCTACATCTGGGGAAATAAGCACCAAAAT
CCTACAGAAGTCTGCTAATATCTGTTCTTTTGCACTCAAAGATTGCTTCA
CCTCTTGTCTCGACAAGACTATTTTCCTGGAATCCTTAAAACGAGCTACA
ATTACCCCGGTTCTTAAAGAAGGCAATCCGACGAGTGTTAAAAACTACAG
ACCTATTAGCATACTTCCTACAGTATccaaagtatttgaaaaaatcattg
cccAACAATTAAAtccttttttagaaaactgTTTTTTCAGATTTACTGTG
TGGCTTTCGAAAAGAACATACAGTACACAACATGCTCTATTGCGATTATT
ACATCTCTGGCAAAGGGCACTTGATGATTCAAATATTGTGGGTACAATAC
TTATGGATTTATCAAAAGCTTACGATtgtttaccccctgatttactTATT
GCAAAATTAGCAGCATATGGTGTTAACCACAATAGTCTACTCTTTATATA
TGATTATTTGATAAACCGTTACCATAGAGTCAAAATTGGAAATAGTCTGA
GTAGCTTCTTATCTATTAGTATGGGCGTCCCTCAGGGATCCATTTTAGGC
CCAAttctttttaacatatttttgaaTAATCTCTTACTATCTGACCTTGA
AGCAGAACTCTGTAACTTTGCTGATGACAACACCCTTTTCGCAATCGCTA
AAGCCCTTGCTGAAATTATCGAAATTCAAGATATTTTGTACTGGGGTAAA
ATCAATGGGCTTGTTGCCAATCCAGGAAAGTTCGAAGTTATGTTTCTTGG
TAGATTTGAGCCTATATCTACTTTTAATATAGGAAATATCaaagttaaag
ttaaaaatCAGGTCAAACTTTTAGGTATCTAAATGTCATTGAATAGTAAA
AAATCTACATCTGGGGAAATAAGCACCAAAATCCTACAGAAGTCTGCTAA
TATCTGTTCTTTTGCACTCAAAGATTGCTTCACCTCTTGTCTCGACAAGA
CTATTTTCCTGGAATCCTTAAAACGAGCTACAATTACCCCGGTTCTTAAA
GAAGGCAATCCGACGAGTGTTAAAAACTACAGACCTATTAGCATACTTCC
TACAGTATccaaagtatttgaaaaaatcattgcccAACAATTAAAtcctt
ttttagaaaactgTTTTTTCAGATTTACTGTGTGGCTTTCGAAAAGAACA
TACAGTACACAACATGCTCTATTGCGATTATTACATCTCTGGCAAAGGGC
ACTTGATGATTCAAATATTGTGGGTACAATACTTATGGATTTATCAAAAG
CTTACGATtgtttaccccctgatttactTATTGCAAAATTAGCAGCATAT
GGTGTTAACCACAATAGTCTACTCTTTATATATGATTATTTGATAAACCG
TTACCATAGAGTCAAAATTGGAAATAGTCTGAGTAGCTTCTTATCTATTA
GTATGGGCGTCCCTCAGGGATCCATTTTAGGCCCAAttctttttaacata
tttttgaaTAATCTCTTACTATCTGACCTTGAAGCAGAACTCTGTAACTT
TGCTGATGACAACACCCTTTTCGCAATCGCTAAAGCCCTTGCTGAAATTA
TCGAAATTCAAGATATTTTGTACTGGGGTAAAATCAATGGGCTTGTTGCC
AATCCAGGAAAGTTCGAAGTTATGTTTCTTGGTAGATTTGAGCCTATATC
TACTTTTAATATAGGAAATATCaaagttaaagttaaaaatCAGGTCAAAC
TTTTAGGTATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_000371XLOC_000371-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000135_pilongenomesc0000135_pilon:420880..421761 +
Properties
Property NameValue
Aaloc1-882:1